RNA–Protein interactions for RNA: YDR363W-A

SEM1, Transcript of Component of lid subcomplex of 26S proteasome regulatory subunit, yeastyeast

Gene SEM1, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEM1YDR363W-A GRE2Q12068 342 aaKnown RBP13.48□□□□□ -0.25
SEM1YDR363W-A EDS1P38073 919 aa13.47□□□□□ -0.25
SEM1YDR363W-A TFG1P41895 735 aaPredicted RBP13.47□□□□□ -0.25
SEM1YDR363W-A YEL023CP39992 682 aa13.46□□□□□ -0.25
SEM1YDR363W-A PTC4P38089 393 aa13.44□□□□□ -0.26
SEM1YDR363W-A PTC3P34221 468 aaKnown RBP13.43□□□□□ -0.26
SEM1YDR363W-A COQ8P27697 501 aa13.41□□□□□ -0.26
SEM1YDR363W-A ATH1P48016 1211 aa13.38□□□□□ -0.27
SEM1YDR363W-A SAP30P38429 201 aa13.36□□□□□ -0.27
SEM1YDR363W-A GUT1P32190 709 aa13.35□□□□□ -0.27
SEM1YDR363W-A YDL129WQ07555 291 aa13.35□□□□□ -0.27
SEM1YDR363W-A NST1P53935 1240 aa13.21□□□□□ -0.29
SEM1YDR363W-A SOL3P38858 249 aa13.19□□□□□ -0.3
SEM1YDR363W-A PML39Q03760 334 aa13.19□□□□□ -0.3
SEM1YDR363W-A NOP53Q12080 455 aaKnown RBP13.19□□□□□ -0.3
SEM1YDR363W-A CHL1P22516 861 aaPredicted RBP13.15□□□□□ -0.3
SEM1YDR363W-A PRE3P38624 215 aa13.13□□□□□ -0.31
SEM1YDR363W-A MPH3P0CE00 602 aa13.09□□□□□ -0.31
SEM1YDR363W-A AI4P03878 556 aa13.07□□□□□ -0.32
SEM1YDR363W-A YDR344CQ05510 147 aa13.06□□□□□ -0.32
SEM1YDR363W-A MID1P41821 548 aa13.05□□□□□ -0.32
SEM1YDR363W-A YGR273CP53329 174 aa13.04□□□□□ -0.32
SEM1YDR363W-A ILV3P39522 585 aaKnown RBP13.02□□□□□ -0.33
SEM1YDR363W-A BCK2P33306 851 aa13□□□□□ -0.33
SEM1YDR363W-A SET1P38827 1080 aaKnown RBP12.98□□□□□ -0.33
SEM1YDR363W-A ELP4Q02884 456 aaKnown RBP12.98□□□□□ -0.33
SEM1YDR363W-A ARH1P48360 493 aa12.94□□□□□ -0.34
SEM1YDR363W-A PEX29Q03370 554 aa12.92□□□□□ -0.34
SEM1YDR363W-A VRP1P37370 817 aa12.84□□□□□ -0.35
SEM1YDR363W-A SLI15P38283 698 aa12.81□□□□□ -0.36
SEM1YDR363W-A MPC54Q08550 464 aa12.81□□□□□ -0.36
SEM1YDR363W-A HAP5Q02516 242 aa12.8□□□□□ -0.36
SEM1YDR363W-A KEX1P09620 729 aa12.79□□□□□ -0.36
SEM1YDR363W-A SPT23P35210 1082 aa12.79□□□□□ -0.36
SEM1YDR363W-A DMA1P38823 416 aa12.77□□□□□ -0.37
SEM1YDR363W-A XDJ1P39102 459 aa12.73□□□□□ -0.37
SEM1YDR363W-A NMA111P53920 997 aa12.72□□□□□ -0.37
SEM1YDR363W-A UBP14P38237 781 aaKnown RBP12.71□□□□□ -0.37
SEM1YDR363W-A DPL1Q05567 589 aa12.71□□□□□ -0.37
SEM1YDR363W-A VHR2P40041 505 aa12.7□□□□□ -0.38
SEM1YDR363W-A BNI4P53858 892 aa12.7□□□□□ -0.38
SEM1YDR363W-A YLR326WQ06170 240 aaKnown RBP12.7□□□□□ -0.38
SEM1YDR363W-A IFH1P39520 1085 aa12.65□□□□□ -0.38
SEM1YDR363W-A PTC2P39966 464 aaKnown RBP12.63□□□□□ -0.39
SEM1YDR363W-A YML082WQ04533 649 aaKnown RBP12.62□□□□□ -0.39
SEM1YDR363W-A PCS60P38137 543 aaKnown RBP RIP-Chip data12.61□□□□□ -0.39not detected
SEM1YDR363W-A CDC73Q06697 393 aa12.6□□□□□ -0.39
SEM1YDR363W-A RAD54P32863 898 aa12.58□□□□□ -0.4
SEM1YDR363W-A ISU2Q12056 156 aa12.57□□□□□ -0.4
SEM1YDR363W-A YPR148CQ06523 435 aa12.56□□□□□ -0.4
SEM1YDR363W-A RQC2Q12532 1038 aaKnown RBP12.56□□□□□ -0.4
SEM1YDR363W-A YDR090CQ03193 310 aa12.52□□□□□ -0.41
SEM1YDR363W-A REF2P42073 533 aaPredicted RBP12.47□□□□□ -0.41
SEM1YDR363W-A YPR015CQ12531 247 aa12.46□□□□□ -0.41
SEM1YDR363W-A DPS1P04802 557 aaKnown RBP12.45□□□□□ -0.42
SEM1YDR363W-A RPP1BP10622 106 aaKnown RBP12.44□□□□□ -0.42
SEM1YDR363W-A RAM1P22007 431 aa12.44□□□□□ -0.42
SEM1YDR363W-A KIC1P38692 1080 aa12.44□□□□□ -0.42
SEM1YDR363W-A VPS70P47161 811 aa12.44□□□□□ -0.42
SEM1YDR363W-A PDR1P12383 1068 aa12.39□□□□□ -0.43
SEM1YDR363W-A SAS10Q12136 610 aaPredicted RBP12.31□□□□□ -0.44
SEM1YDR363W-A GAP1P19145 602 aaPredicted RBP12.3□□□□□ -0.44
SEM1YDR363W-A COX6P00427 148 aa12.28□□□□□ -0.44
SEM1YDR363W-A PEX21P50091 288 aa12.28□□□□□ -0.44
SEM1YDR363W-A CSC1Q06538 782 aa12.27□□□□□ -0.45
SEM1YDR363W-A GYP1Q08484 637 aa12.27□□□□□ -0.45
SEM1YDR363W-A YRR1Q12172 810 aa12.27□□□□□ -0.45
SEM1YDR363W-A MAK21Q12176 1025 aaKnown RBP12.27□□□□□ -0.45
SEM1YDR363W-A ORC6P38826 435 aa12.25□□□□□ -0.45
SEM1YDR363W-A TFB4Q12004 338 aa12.24□□□□□ -0.45
SEM1YDR363W-A TUM1Q08686 304 aaKnown RBP12.2□□□□□ -0.46
SEM1YDR363W-A CKB1P43639 278 aa12.19□□□□□ -0.46
SEM1YDR363W-A SAS4Q04003 481 aa12.19□□□□□ -0.46
SEM1YDR363W-A RAS1P01119 309 aa12.18□□□□□ -0.46
SEM1YDR363W-A BUD20Q08004 166 aaPredicted RBP12.15□□□□□ -0.46
SEM1YDR363W-A SRC1Q03707 834 aa12.14□□□□□ -0.47
SEM1YDR363W-A STR2P47164 639 aa12.13□□□□□ -0.47
SEM1YDR363W-A MVP1P40959 511 aaKnown RBP12.12□□□□□ -0.47
SEM1YDR363W-A ISM1P48526 1002 aa12.12□□□□□ -0.47
SEM1YDR363W-A SDH2P21801 266 aa12.11□□□□□ -0.47
SEM1YDR363W-A NUD1P32336 851 aa12.11□□□□□ -0.47
SEM1YDR363W-A PBS2P08018 668 aa12.1□□□□□ -0.47
SEM1YDR363W-A PRT1P06103 763 aaKnown RBP12.09□□□□□ -0.47
SEM1YDR363W-A AMS1P22855 1083 aa12.09□□□□□ -0.47
SEM1YDR363W-A RGR1P19263 1082 aa12.06□□□□□ -0.48
SEM1YDR363W-A NPL4P33755 580 aa12.05□□□□□ -0.48
SEM1YDR363W-A YPR109WQ06104 294 aa12.04□□□□□ -0.48
SEM1YDR363W-A MRF1P30775 413 aaPredicted RBP12.01□□□□□ -0.49
SEM1YDR363W-A YEL077CQ3E7X8 1277 aa11.99□□□□□ -0.49
SEM1YDR363W-A GCD11P32481 527 aaKnown RBP11.97□□□□□ -0.49
SEM1YDR363W-A TY1A-DR4O74302 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-HP0C2I4 478 aaKnown RBP11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-AP0CX57 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-PR1P0CX58 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-ORP0CX59 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-PR2P0CX60 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-DR5P0CX65 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-ER2P0CX66 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-GR3P0CX67 440 aa11.96□□□□□ -0.49
SEM1YDR363W-A TY1A-LR1P0CX68 440 aa11.96□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms