RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C SAP30P38429 201 aa9.06□□□□□ -0.96
FCF1YDR339C YEL023CP39992 682 aa9.05□□□□□ -0.96
FCF1YDR339C MAK11P20484 414 aaKnown RBP9.03□□□□□ -0.96
FCF1YDR339C PTC4P38089 393 aa9.03□□□□□ -0.96
FCF1YDR339C EDS1P38073 919 aa9.02□□□□□ -0.97
FCF1YDR339C GRE2Q12068 342 aaKnown RBP9.01□□□□□ -0.97
FCF1YDR339C PTC3P34221 468 aaKnown RBP8.98□□□□□ -0.97
FCF1YDR339C YDL129WQ07555 291 aa8.98□□□□□ -0.97
FCF1YDR339C ATH1P48016 1211 aa8.95□□□□□ -0.98
FCF1YDR339C COQ8P27697 501 aa8.94□□□□□ -0.98
FCF1YDR339C GUT1P32190 709 aa8.91□□□□□ -0.98
FCF1YDR339C PML39Q03760 334 aa8.9□□□□□ -0.98
FCF1YDR339C YDR344CQ05510 147 aa8.9□□□□□ -0.98
FCF1YDR339C CHL1P22516 861 aaPredicted RBP8.87□□□□□ -0.99
FCF1YDR339C PRE3P38624 215 aa8.86□□□□□ -0.99
FCF1YDR339C SOL3P38858 249 aa8.86□□□□□ -0.99
FCF1YDR339C NST1P53935 1240 aa8.85□□□□□ -0.99
FCF1YDR339C MID1P41821 548 aa8.82□□□□□ -1
FCF1YDR339C BCK2P33306 851 aa8.8□□□□□ -1
FCF1YDR339C ELP4Q02884 456 aaKnown RBP8.76□□□□□ -1.01
FCF1YDR339C ILV3P39522 585 aaKnown RBP8.75□□□□□ -1.01
FCF1YDR339C MPH3P0CE00 602 aa8.74□□□□□ -1.01
FCF1YDR339C AI4P03878 556 aa8.71□□□□□ -1.02
FCF1YDR339C VRP1P37370 817 aa8.7□□□□□ -1.02
FCF1YDR339C YGR273CP53329 174 aa8.7□□□□□ -1.02
FCF1YDR339C ARH1P48360 493 aa8.69□□□□□ -1.02
FCF1YDR339C NOP53Q12080 455 aaKnown RBP8.68□□□□□ -1.02
FCF1YDR339C PEX29Q03370 554 aa8.67□□□□□ -1.02
FCF1YDR339C SET1P38827 1080 aaKnown RBP8.6□□□□□ -1.03
FCF1YDR339C XDJ1P39102 459 aa8.59□□□□□ -1.03
FCF1YDR339C MPC54Q08550 464 aa8.59□□□□□ -1.03
FCF1YDR339C SPT23P35210 1082 aa8.58□□□□□ -1.04
FCF1YDR339C SLI15P38283 698 aa8.58□□□□□ -1.04
FCF1YDR339C HAP5Q02516 242 aa8.58□□□□□ -1.04
FCF1YDR339C NMA111P53920 997 aa8.54□□□□□ -1.04
FCF1YDR339C KEX1P09620 729 aa8.53□□□□□ -1.04
FCF1YDR339C BNI4P53858 892 aa8.5□□□□□ -1.05
FCF1YDR339C DPL1Q05567 589 aa8.49□□□□□ -1.05
FCF1YDR339C PTC2P39966 464 aaKnown RBP8.48□□□□□ -1.05
FCF1YDR339C UBP14P38237 781 aaKnown RBP8.47□□□□□ -1.05
FCF1YDR339C VHR2P40041 505 aa8.47□□□□□ -1.05
FCF1YDR339C YLR326WQ06170 240 aaKnown RBP8.46□□□□□ -1.06
FCF1YDR339C CDC73Q06697 393 aa8.46□□□□□ -1.06
FCF1YDR339C DPS1P04802 557 aaKnown RBP8.45□□□□□ -1.06
FCF1YDR339C YML082WQ04533 649 aaKnown RBP8.45□□□□□ -1.06
FCF1YDR339C PCS60P38137 543 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
FCF1YDR339C YPR015CQ12531 247 aa8.4□□□□□ -1.06
FCF1YDR339C ISU2Q12056 156 aa8.39□□□□□ -1.07
FCF1YDR339C RAM1P22007 431 aa8.36□□□□□ -1.07
FCF1YDR339C RAD54P32863 898 aa8.36□□□□□ -1.07
FCF1YDR339C PDR1P12383 1068 aa8.35□□□□□ -1.07
FCF1YDR339C YDR090CQ03193 310 aa8.32□□□□□ -1.08
FCF1YDR339C RAS1P01119 309 aa8.26□□□□□ -1.09
FCF1YDR339C IFH1P39520 1085 aa8.26□□□□□ -1.09
FCF1YDR339C SRC1Q03707 834 aa8.25□□□□□ -1.09
FCF1YDR339C GYP1Q08484 637 aa8.25□□□□□ -1.09
FCF1YDR339C KIC1P38692 1080 aa8.23□□□□□ -1.09
FCF1YDR339C YPR148CQ06523 435 aa8.23□□□□□ -1.09
FCF1YDR339C REF2P42073 533 aaPredicted RBP8.22□□□□□ -1.09
FCF1YDR339C VPS70P47161 811 aa8.22□□□□□ -1.09
FCF1YDR339C RPP1BP10622 106 aaKnown RBP8.21□□□□□ -1.1
FCF1YDR339C YRR1Q12172 810 aa8.2□□□□□ -1.1
FCF1YDR339C SDH2P21801 266 aa8.17□□□□□ -1.1
FCF1YDR339C PEX21P50091 288 aa8.17□□□□□ -1.1
FCF1YDR339C GAP1P19145 602 aaPredicted RBP8.15□□□□□ -1.1
FCF1YDR339C BUD20Q08004 166 aaPredicted RBP8.15□□□□□ -1.1
FCF1YDR339C TUM1Q08686 304 aaKnown RBP8.15□□□□□ -1.1
FCF1YDR339C STR2P47164 639 aa8.12□□□□□ -1.11
FCF1YDR339C AMS1P22855 1083 aa8.11□□□□□ -1.11
FCF1YDR339C ORC6P38826 435 aa8.11□□□□□ -1.11
FCF1YDR339C ISM1P48526 1002 aa8.11□□□□□ -1.11
FCF1YDR339C SAS4Q04003 481 aa8.11□□□□□ -1.11
FCF1YDR339C CSC1Q06538 782 aa8.11□□□□□ -1.11
FCF1YDR339C TFB4Q12004 338 aa8.1□□□□□ -1.11
FCF1YDR339C COX6P00427 148 aa8.09□□□□□ -1.11
FCF1YDR339C PRT1P06103 763 aaKnown RBP8.08□□□□□ -1.12
FCF1YDR339C NUD1P32336 851 aa8.08□□□□□ -1.12
FCF1YDR339C MVP1P40959 511 aaKnown RBP8.05□□□□□ -1.12
FCF1YDR339C MAK21Q12176 1025 aaKnown RBP8.03□□□□□ -1.12
FCF1YDR339C RGR1P19263 1082 aa8.01□□□□□ -1.13
FCF1YDR339C GCD11P32481 527 aaKnown RBP8.01□□□□□ -1.13
FCF1YDR339C NPL4P33755 580 aa8.01□□□□□ -1.13
FCF1YDR339C YPR109WQ06104 294 aa8.01□□□□□ -1.13
FCF1YDR339C YEL077CQ3E7X8 1277 aa8.01□□□□□ -1.13
FCF1YDR339C SEC2P17065 759 aa8□□□□□ -1.13
FCF1YDR339C MRF1P30775 413 aaPredicted RBP8□□□□□ -1.13
FCF1YDR339C TY1A-DR4O74302 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-HP0C2I4 478 aaKnown RBP7.99□□□□□ -1.13
FCF1YDR339C TY1A-AP0CX57 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-PR1P0CX58 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-ORP0CX59 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-PR2P0CX60 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-DR5P0CX65 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-ER2P0CX66 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-GR3P0CX67 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-LR1P0CX68 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-MR2P0CX69 440 aa7.99□□□□□ -1.13
FCF1YDR339C TRK1P12685 1235 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-JR2P47099 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-DR1Q03856 440 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms