RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W ELP4Q02884 456 aaKnown RBP2.33□□□□□ -2.04
MSN5YDR335W HTA1P04911 132 aaKnown RBP2.33□□□□□ -2.04
MSN5YDR335W HTA2P04912 132 aa2.33□□□□□ -2.04
MSN5YDR335W SET1P38827 1080 aaKnown RBP2.32□□□□□ -2.04
MSN5YDR335W NCR1Q12200 1170 aa2.32□□□□□ -2.04
MSN5YDR335W VPS70P47161 811 aa2.32□□□□□ -2.04
MSN5YDR335W PTC3P34221 468 aaKnown RBP2.31□□□□□ -2.04
MSN5YDR335W EAP1P36041 632 aaKnown RBP2.31□□□□□ -2.04
MSN5YDR335W KIC1P38692 1080 aa2.31□□□□□ -2.04
MSN5YDR335W BMT6Q12291 365 aa2.31□□□□□ -2.04
MSN5YDR335W SPB4P25808 606 aaPredicted RBP2.3□□□□□ -2.04
MSN5YDR335W MID1P41821 548 aa2.3□□□□□ -2.04
MSN5YDR335W PML39Q03760 334 aa2.3□□□□□ -2.04
MSN5YDR335W MST1P07236 462 aa2.3□□□□□ -2.04
MSN5YDR335W MAK11P20484 414 aaKnown RBP2.3□□□□□ -2.04
MSN5YDR335W VHR2P40041 505 aa2.3□□□□□ -2.04
MSN5YDR335W YEL023CP39992 682 aa2.29□□□□□ -2.04
MSN5YDR335W SWR1Q05471 1514 aa2.29□□□□□ -2.04
MSN5YDR335W NST1P53935 1240 aa2.29□□□□□ -2.04
MSN5YDR335W YNL035CP53962 389 aaKnown RBP2.28□□□□□ -2.05
MSN5YDR335W PEX21P50091 288 aa2.27□□□□□ -2.05
MSN5YDR335W UBP14P38237 781 aaKnown RBP2.27□□□□□ -2.05
MSN5YDR335W MSB4Q12317 492 aa2.27□□□□□ -2.05
MSN5YDR335W GUT1P32190 709 aa2.26□□□□□ -2.05
MSN5YDR335W YDR090CQ03193 310 aa2.25□□□□□ -2.05
MSN5YDR335W YDL129WQ07555 291 aa2.25□□□□□ -2.05
MSN5YDR335W DIT2P21595 489 aa2.24□□□□□ -2.05
MSN5YDR335W PCS60P38137 543 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
MSN5YDR335W IFH1P39520 1085 aa2.24□□□□□ -2.05
MSN5YDR335W YLR326WQ06170 240 aaKnown RBP2.24□□□□□ -2.05
MSN5YDR335W NSR1P27476 414 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
MSN5YDR335W RAD54P32863 898 aa2.24□□□□□ -2.05
MSN5YDR335W IOC2Q12072 812 aa2.23□□□□□ -2.05
MSN5YDR335W PTC4P38089 393 aa2.23□□□□□ -2.05
MSN5YDR335W SAS10Q12136 610 aaPredicted RBP2.23□□□□□ -2.05
MSN5YDR335W JIP4Q03361 876 aa2.23□□□□□ -2.05
MSN5YDR335W CDC73Q06697 393 aa2.23□□□□□ -2.05
MSN5YDR335W FKH1P40466 484 aa2.22□□□□□ -2.05
MSN5YDR335W RPP1BP10622 106 aaKnown RBP2.22□□□□□ -2.05
MSN5YDR335W SAM3Q08986 587 aa2.22□□□□□ -2.05
MSN5YDR335W AIR2Q12476 344 aaKnown RBP2.22□□□□□ -2.05
MSN5YDR335W ABP1P15891 592 aaKnown RBP2.22□□□□□ -2.05
MSN5YDR335W DNA2P38859 1522 aa2.21□□□□□ -2.06
MSN5YDR335W THO2P53552 1597 aaKnown RBP2.21□□□□□ -2.06
MSN5YDR335W SPA2P23201 1466 aaKnown RBP2.21□□□□□ -2.06
MSN5YDR335W KEX1P09620 729 aa2.21□□□□□ -2.06
MSN5YDR335W NPL4P33755 580 aa2.21□□□□□ -2.06
MSN5YDR335W DAN4P47179 1161 aa2.21□□□□□ -2.06
MSN5YDR335W YGR273CP53329 174 aa2.21□□□□□ -2.06
MSN5YDR335W AIM44Q99299 758 aa2.21□□□□□ -2.06
MSN5YDR335W SEC61P32915 480 aa2.2□□□□□ -2.06
MSN5YDR335W SLI15P38283 698 aa2.2□□□□□ -2.06
MSN5YDR335W PDR1P12383 1068 aa2.2□□□□□ -2.06
MSN5YDR335W GLC3P32775 704 aa2.2□□□□□ -2.06
MSN5YDR335W VRP1P37370 817 aa2.2□□□□□ -2.06
MSN5YDR335W SSK2P53599 1579 aa2.19□□□□□ -2.06
MSN5YDR335W TCB3Q03640 1545 aaKnown RBP2.19□□□□□ -2.06
MSN5YDR335W GCD11P32481 527 aaKnown RBP2.19□□□□□ -2.06
MSN5YDR335W TUM1Q08686 304 aaKnown RBP2.19□□□□□ -2.06
MSN5YDR335W LEU3P08638 886 aa2.19□□□□□ -2.06
MSN5YDR335W SCJ1P25303 377 aa2.19□□□□□ -2.06
MSN5YDR335W ERF2Q06551 359 aa2.19□□□□□ -2.06
MSN5YDR335W GYP1Q08484 637 aa2.19□□□□□ -2.06
MSN5YDR335W NUP42P49686 430 aaKnown RBP2.19□□□□□ -2.06
MSN5YDR335W NMA111P53920 997 aa2.19□□□□□ -2.06
MSN5YDR335W YRR1Q12172 810 aa2.19□□□□□ -2.06
MSN5YDR335W YPR015CQ12531 247 aa2.19□□□□□ -2.06
MSN5YDR335W IES2P40154 320 aa2.18□□□□□ -2.06
MSN5YDR335W REF2P42073 533 aaPredicted RBP2.18□□□□□ -2.06
MSN5YDR335W RLF2Q12495 606 aa2.18□□□□□ -2.06
MSN5YDR335W PTC2P39966 464 aaKnown RBP2.18□□□□□ -2.06
MSN5YDR335W ITT1Q04638 464 aa2.18□□□□□ -2.06
MSN5YDR335W YPR148CQ06523 435 aa2.18□□□□□ -2.06
MSN5YDR335W TYW1Q08960 810 aaKnown RBP2.18□□□□□ -2.06
MSN5YDR335W RPN1P38764 993 aaKnown RBP2.18□□□□□ -2.06
MSN5YDR335W YMR196WQ04336 1088 aa2.18□□□□□ -2.06
MSN5YDR335W PBS2P08018 668 aa2.17□□□□□ -2.06
MSN5YDR335W ATF2P53296 535 aa2.17□□□□□ -2.06
MSN5YDR335W RGA2Q06407 1009 aa2.17□□□□□ -2.06
MSN5YDR335W KTR1P27810 393 aaKnown RBP2.17□□□□□ -2.06
MSN5YDR335W MPC54Q08550 464 aa2.17□□□□□ -2.06
MSN5YDR335W PEP1P32319 1579 aa2.17□□□□□ -2.06
MSN5YDR335W INO80P53115 1489 aa2.16□□□□□ -2.06
MSN5YDR335W CHL1P22516 861 aaPredicted RBP2.15□□□□□ -2.06
MSN5YDR335W HAP5Q02516 242 aa2.15□□□□□ -2.06
MSN5YDR335W DPL1Q05567 589 aa2.15□□□□□ -2.07
MSN5YDR335W GBP2P25555 427 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
MSN5YDR335W PRE3P38624 215 aa2.15□□□□□ -2.07
MSN5YDR335W YPR109WQ06104 294 aa2.14□□□□□ -2.07
MSN5YDR335W IRC20Q06554 1556 aa2.14□□□□□ -2.07
MSN5YDR335W BCK2P33306 851 aa2.14□□□□□ -2.07
MSN5YDR335W MAM3Q12296 706 aa2.14□□□□□ -2.07
MSN5YDR335W MYO2P19524 1574 aaKnown RBP2.14□□□□□ -2.07
MSN5YDR335W MPH3P0CE00 602 aa2.13□□□□□ -2.07
MSN5YDR335W PKC1P24583 1151 aa2.13□□□□□ -2.07
MSN5YDR335W ORC6P38826 435 aa2.13□□□□□ -2.07
MSN5YDR335W IOC4Q04213 475 aa2.13□□□□□ -2.07
MSN5YDR335W SPT23P35210 1082 aa2.13□□□□□ -2.07
MSN5YDR335W DSF2P38213 736 aa2.13□□□□□ -2.07
MSN5YDR335W SEC2P17065 759 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms