RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W HTA1P04911 132 aaKnown RBP6.67□□□□□ -1.34
SSF2YDR312W HTA2P04912 132 aa6.67□□□□□ -1.34
SSF2YDR312W ATH1P48016 1211 aa6.65□□□□□ -1.35
SSF2YDR312W NOP53Q12080 455 aaKnown RBP6.65□□□□□ -1.35
SSF2YDR312W GUT1P32190 709 aa6.64□□□□□ -1.35
SSF2YDR312W TFG1P41895 735 aaPredicted RBP6.63□□□□□ -1.35
SSF2YDR312W JIP4Q03361 876 aa6.63□□□□□ -1.35
SSF2YDR312W YEL023CP39992 682 aa6.61□□□□□ -1.35
SSF2YDR312W DAN4P47179 1161 aa6.61□□□□□ -1.35
SSF2YDR312W PTC4P38089 393 aa6.6□□□□□ -1.35
SSF2YDR312W SET1P38827 1080 aaKnown RBP6.59□□□□□ -1.35
SSF2YDR312W BCK2P33306 851 aa6.57□□□□□ -1.36
SSF2YDR312W SOL3P38858 249 aa6.55□□□□□ -1.36
SSF2YDR312W NST1P53935 1240 aa6.54□□□□□ -1.36
SSF2YDR312W CHL1P22516 861 aaPredicted RBP6.53□□□□□ -1.36
SSF2YDR312W SAP30P38429 201 aa6.53□□□□□ -1.36
SSF2YDR312W YGR273CP53329 174 aa6.5□□□□□ -1.37
SSF2YDR312W YDL129WQ07555 291 aa6.5□□□□□ -1.37
SSF2YDR312W AI4P03878 556 aa6.48□□□□□ -1.37
SSF2YDR312W MPH3P0CE00 602 aa6.48□□□□□ -1.37
SSF2YDR312W PRE3P38624 215 aa6.47□□□□□ -1.37
SSF2YDR312W IFH1P39520 1085 aa6.47□□□□□ -1.37
SSF2YDR312W PML39Q03760 334 aa6.47□□□□□ -1.37
SSF2YDR312W DMA1P38823 416 aa6.45□□□□□ -1.38
SSF2YDR312W ILV3P39522 585 aaKnown RBP6.45□□□□□ -1.38
SSF2YDR312W YPR148CQ06523 435 aa6.44□□□□□ -1.38
SSF2YDR312W MID1P41821 548 aa6.42□□□□□ -1.38
SSF2YDR312W KEX1P09620 729 aa6.39□□□□□ -1.39
SSF2YDR312W UBP14P38237 781 aaKnown RBP6.39□□□□□ -1.39
SSF2YDR312W XDJ1P39102 459 aa6.39□□□□□ -1.39
SSF2YDR312W VHR2P40041 505 aa6.38□□□□□ -1.39
SSF2YDR312W YLR326WQ06170 240 aaKnown RBP6.38□□□□□ -1.39
SSF2YDR312W RQC2Q12532 1038 aaKnown RBP6.38□□□□□ -1.39
SSF2YDR312W SLI15P38283 698 aa6.37□□□□□ -1.39
SSF2YDR312W VPS70P47161 811 aa6.37□□□□□ -1.39
SSF2YDR312W VRP1P37370 817 aa6.36□□□□□ -1.39
SSF2YDR312W PEX29Q03370 554 aa6.36□□□□□ -1.39
SSF2YDR312W YDR344CQ05510 147 aa6.36□□□□□ -1.39
SSF2YDR312W ARH1P48360 493 aa6.34□□□□□ -1.39
SSF2YDR312W ELP4Q02884 456 aaKnown RBP6.34□□□□□ -1.39
SSF2YDR312W REF2P42073 533 aaPredicted RBP6.33□□□□□ -1.4
SSF2YDR312W PCS60P38137 543 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SSF2YDR312W MPC54Q08550 464 aa6.32□□□□□ -1.4
SSF2YDR312W RAD54P32863 898 aa6.31□□□□□ -1.4
SSF2YDR312W YDR090CQ03193 310 aa6.31□□□□□ -1.4
SSF2YDR312W SAS10Q12136 610 aaPredicted RBP6.31□□□□□ -1.4
SSF2YDR312W DPL1Q05567 589 aa6.3□□□□□ -1.4
SSF2YDR312W HAP5Q02516 242 aa6.29□□□□□ -1.4
SSF2YDR312W KIC1P38692 1080 aa6.28□□□□□ -1.4
SSF2YDR312W CKB1P43639 278 aa6.28□□□□□ -1.4
SSF2YDR312W NMA111P53920 997 aa6.28□□□□□ -1.4
SSF2YDR312W SPT23P35210 1082 aa6.27□□□□□ -1.41
SSF2YDR312W CDC73Q06697 393 aa6.27□□□□□ -1.41
SSF2YDR312W DPS1P04802 557 aaKnown RBP6.26□□□□□ -1.41
SSF2YDR312W COX6P00427 148 aa6.25□□□□□ -1.41
SSF2YDR312W BNI4P53858 892 aa6.25□□□□□ -1.41
SSF2YDR312W MAK21Q12176 1025 aaKnown RBP6.25□□□□□ -1.41
SSF2YDR312W ISU2Q12056 156 aa6.24□□□□□ -1.41
SSF2YDR312W RPP1BP10622 106 aaKnown RBP6.23□□□□□ -1.41
SSF2YDR312W PBS2P08018 668 aa6.2□□□□□ -1.42
SSF2YDR312W PTC2P39966 464 aaKnown RBP6.2□□□□□ -1.42
SSF2YDR312W YML082WQ04533 649 aaKnown RBP6.19□□□□□ -1.42
SSF2YDR312W GAP1P19145 602 aaPredicted RBP6.18□□□□□ -1.42
SSF2YDR312W ORC6P38826 435 aa6.17□□□□□ -1.42
SSF2YDR312W RGA2Q06407 1009 aa6.17□□□□□ -1.42
SSF2YDR312W CSC1Q06538 782 aa6.17□□□□□ -1.42
SSF2YDR312W RAM1P22007 431 aa6.15□□□□□ -1.43
SSF2YDR312W DSF2P38213 736 aa6.15□□□□□ -1.43
SSF2YDR312W PEX21P50091 288 aa6.14□□□□□ -1.43
SSF2YDR312W TFB4Q12004 338 aa6.14□□□□□ -1.43
SSF2YDR312W PDR1P12383 1068 aa6.13□□□□□ -1.43
SSF2YDR312W MAM3Q12296 706 aa6.13□□□□□ -1.43
SSF2YDR312W YPR015CQ12531 247 aa6.13□□□□□ -1.43
SSF2YDR312W SPB4P25808 606 aaPredicted RBP6.12□□□□□ -1.43
SSF2YDR312W YRR1Q12172 810 aa6.12□□□□□ -1.43
SSF2YDR312W MVP1P40959 511 aaKnown RBP6.1□□□□□ -1.43
SSF2YDR312W TUM1Q08686 304 aaKnown RBP6.1□□□□□ -1.43
SSF2YDR312W RGR1P19263 1082 aa6.08□□□□□ -1.44
SSF2YDR312W IES2P40154 320 aa6.08□□□□□ -1.44
SSF2YDR312W PSE1P32337 1089 aaKnown RBP6.07□□□□□ -1.44
SSF2YDR312W RGA1P39083 1007 aa6.07□□□□□ -1.44
SSF2YDR312W SRC1Q03707 834 aa6.07□□□□□ -1.44
SSF2YDR312W NUP42P49686 430 aaKnown RBP6.06□□□□□ -1.44
SSF2YDR312W YPR109WQ06104 294 aa6.06□□□□□ -1.44
SSF2YDR312W NUD1P32336 851 aa6.05□□□□□ -1.44
SSF2YDR312W STR2P47164 639 aa6.04□□□□□ -1.44
SSF2YDR312W GYP1Q08484 637 aa6.04□□□□□ -1.44
SSF2YDR312W ISM1P48526 1002 aa6.03□□□□□ -1.44
SSF2YDR312W BUD20Q08004 166 aaPredicted RBP6.03□□□□□ -1.44
SSF2YDR312W DIT2P21595 489 aa6.02□□□□□ -1.45
SSF2YDR312W SAS4Q04003 481 aa6.02□□□□□ -1.45
SSF2YDR312W NPL4P33755 580 aa6.01□□□□□ -1.45
SSF2YDR312W PRT1P06103 763 aaKnown RBP6□□□□□ -1.45
SSF2YDR312W CLB5P30283 435 aa5.99□□□□□ -1.45
SSF2YDR312W GCD11P32481 527 aaKnown RBP5.96□□□□□ -1.45
SSF2YDR312W TY1A-DR4O74302 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-HP0C2I4 478 aaKnown RBP5.95□□□□□ -1.46
SSF2YDR312W TY1A-AP0CX57 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-PR1P0CX58 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-ORP0CX59 440 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms