RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W RTG3P38165 486 aa3.62□□□□□ -1.83
BFR2YDR299W MGA2P40578 1113 aa3.62□□□□□ -1.83
BFR2YDR299W VMA1P17255 1071 aaKnown RBP3.62□□□□□ -1.83
BFR2YDR299W DBP1P24784 617 aaKnown RBP3.62□□□□□ -1.83
BFR2YDR299W YFR006WP43590 535 aa3.62□□□□□ -1.83
BFR2YDR299W JIP4Q03361 876 aa3.61□□□□□ -1.83
BFR2YDR299W STS1P38637 319 aa3.59□□□□□ -1.83
BFR2YDR299W YDR344CQ05510 147 aa3.59□□□□□ -1.83
BFR2YDR299W ELP4Q02884 456 aaKnown RBP3.59□□□□□ -1.84
BFR2YDR299W RCR1P38212 213 aa3.56□□□□□ -1.84
BFR2YDR299W GAR1P28007 205 aaKnown RBP3.55□□□□□ -1.84
BFR2YDR299W RAS1P01119 309 aa3.54□□□□□ -1.84
BFR2YDR299W ABP1P15891 592 aaKnown RBP3.53□□□□□ -1.84
BFR2YDR299W PTC4P38089 393 aa3.52□□□□□ -1.85
BFR2YDR299W GYP5Q12344 894 aa3.52□□□□□ -1.85
BFR2YDR299W HTA1P04911 132 aaKnown RBP3.5□□□□□ -1.85
BFR2YDR299W HTA2P04912 132 aa3.5□□□□□ -1.85
BFR2YDR299W DCW1P36091 449 aa3.5□□□□□ -1.85
BFR2YDR299W YEL023CP39992 682 aa3.5□□□□□ -1.85
BFR2YDR299W MIF2P35201 549 aa3.45□□□□□ -1.86
BFR2YDR299W GRE2Q12068 342 aaKnown RBP3.45□□□□□ -1.86
BFR2YDR299W PEX29Q03370 554 aa3.44□□□□□ -1.86
BFR2YDR299W PML39Q03760 334 aa3.44□□□□□ -1.86
BFR2YDR299W MAK11P20484 414 aaKnown RBP3.43□□□□□ -1.86
BFR2YDR299W ATH1P48016 1211 aa3.43□□□□□ -1.86
BFR2YDR299W ARH1P48360 493 aa3.43□□□□□ -1.86
BFR2YDR299W NST1P53935 1240 aa3.42□□□□□ -1.86
BFR2YDR299W RAM2P29703 316 aa3.41□□□□□ -1.86
BFR2YDR299W PTC3P34221 468 aaKnown RBP3.41□□□□□ -1.86
BFR2YDR299W GUT1P32190 709 aa3.4□□□□□ -1.87
BFR2YDR299W SPT23P35210 1082 aa3.4□□□□□ -1.87
BFR2YDR299W EDS1P38073 919 aa3.4□□□□□ -1.87
BFR2YDR299W COQ8P27697 501 aa3.38□□□□□ -1.87
BFR2YDR299W MID1P41821 548 aa3.38□□□□□ -1.87
BFR2YDR299W SOL3P38858 249 aa3.37□□□□□ -1.87
BFR2YDR299W ILV3P39522 585 aaKnown RBP3.34□□□□□ -1.87
BFR2YDR299W YML082WQ04533 649 aaKnown RBP3.34□□□□□ -1.87
BFR2YDR299W BNI4P53858 892 aa3.33□□□□□ -1.88
BFR2YDR299W MPH3P0CE00 602 aa3.33□□□□□ -1.88
BFR2YDR299W HAP5Q02516 242 aa3.33□□□□□ -1.88
BFR2YDR299W AI4P03878 556 aa3.32□□□□□ -1.88
BFR2YDR299W AMS1P22855 1083 aa3.3□□□□□ -1.88
BFR2YDR299W YGR273CP53329 174 aa3.3□□□□□ -1.88
BFR2YDR299W PTC2P39966 464 aaKnown RBP3.29□□□□□ -1.88
BFR2YDR299W MPC54Q08550 464 aa3.29□□□□□ -1.88
BFR2YDR299W NOP53Q12080 455 aaKnown RBP3.29□□□□□ -1.88
BFR2YDR299W YPR015CQ12531 247 aa3.28□□□□□ -1.88
BFR2YDR299W BRE2P43132 505 aa3.26□□□□□ -1.89
BFR2YDR299W NRD1P53617 575 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
BFR2YDR299W RAM1P22007 431 aa3.26□□□□□ -1.89
BFR2YDR299W SLI15P38283 698 aa3.26□□□□□ -1.89
BFR2YDR299W NMA111P53920 997 aa3.25□□□□□ -1.89
BFR2YDR299W SET1P38827 1080 aaKnown RBP3.24□□□□□ -1.89
BFR2YDR299W GCR2Q01722 534 aa3.24□□□□□ -1.89
BFR2YDR299W DPL1Q05567 589 aa3.24□□□□□ -1.89
BFR2YDR299W KEX1P09620 729 aa3.23□□□□□ -1.89
BFR2YDR299W SDH2P21801 266 aa3.23□□□□□ -1.89
BFR2YDR299W VHR2P40041 505 aa3.21□□□□□ -1.9
BFR2YDR299W CDC73Q06697 393 aa3.2□□□□□ -1.9
BFR2YDR299W ISU2Q12056 156 aa3.2□□□□□ -1.9
BFR2YDR299W RAD54P32863 898 aa3.19□□□□□ -1.9
BFR2YDR299W YLR326WQ06170 240 aaKnown RBP3.19□□□□□ -1.9
BFR2YDR299W GYP1Q08484 637 aa3.19□□□□□ -1.9
BFR2YDR299W RPP1BP10622 106 aaKnown RBP3.18□□□□□ -1.9
BFR2YDR299W PCS60P38137 543 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
BFR2YDR299W UBP14P38237 781 aaKnown RBP3.17□□□□□ -1.9
BFR2YDR299W PDR1P12383 1068 aa3.16□□□□□ -1.9
BFR2YDR299W KIC1P38692 1080 aa3.16□□□□□ -1.9
BFR2YDR299W IFH1P39520 1085 aa3.15□□□□□ -1.91
BFR2YDR299W PEX21P50091 288 aa3.15□□□□□ -1.91
BFR2YDR299W MET22P32179 357 aa3.14□□□□□ -1.91
BFR2YDR299W SAS4Q04003 481 aa3.14□□□□□ -1.91
BFR2YDR299W YDR090CQ03193 310 aa3.11□□□□□ -1.91
BFR2YDR299W ENV9Q08651 330 aa3.11□□□□□ -1.91
BFR2YDR299W YRR1Q12172 810 aa3.11□□□□□ -1.91
BFR2YDR299W YEL077CQ3E7X8 1277 aa3.11□□□□□ -1.91
BFR2YDR299W MRF1P30775 413 aaPredicted RBP3.1□□□□□ -1.91
BFR2YDR299W REF2P42073 533 aaPredicted RBP3.1□□□□□ -1.91
BFR2YDR299W VPS70P47161 811 aa3.09□□□□□ -1.91
BFR2YDR299W CSC1Q06538 782 aa3.09□□□□□ -1.91
BFR2YDR299W TUM1Q08686 304 aaKnown RBP3.09□□□□□ -1.91
BFR2YDR299W YDL176WQ12027 708 aa3.09□□□□□ -1.91
BFR2YDR299W PRT1P06103 763 aaKnown RBP3.08□□□□□ -1.92
BFR2YDR299W NUD1P32336 851 aa3.08□□□□□ -1.92
BFR2YDR299W NPL4P33755 580 aa3.08□□□□□ -1.92
BFR2YDR299W YPR148CQ06523 435 aa3.08□□□□□ -1.92
BFR2YDR299W BUD20Q08004 166 aaPredicted RBP3.08□□□□□ -1.92
BFR2YDR299W TFB4Q12004 338 aa3.08□□□□□ -1.92
BFR2YDR299W AIR1P40507 360 aaKnown RBP3.08□□□□□ -1.92
BFR2YDR299W STR2P47164 639 aa3.08□□□□□ -1.92
BFR2YDR299W CLA4P48562 842 aa3.08□□□□□ -1.92
BFR2YDR299W ERG12P07277 443 aa3.07□□□□□ -1.92
BFR2YDR299W ISM1P48526 1002 aa3.07□□□□□ -1.92
BFR2YDR299W GAP1P19145 602 aaPredicted RBP3.06□□□□□ -1.92
BFR2YDR299W ORC6P38826 435 aa3.06□□□□□ -1.92
BFR2YDR299W CST6P40535 587 aa3.06□□□□□ -1.92
BFR2YDR299W GCD11P32481 527 aaKnown RBP3.05□□□□□ -1.92
BFR2YDR299W SPT16P32558 1035 aaKnown RBP3.04□□□□□ -1.92
BFR2YDR299W MAK21Q12176 1025 aaKnown RBP3.04□□□□□ -1.92
BFR2YDR299W COX6P00427 148 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms