RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE3, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE3YDR288W DCW1P36091 449 aa9.11□□□□□ -0.95
NSE3YDR288W MAM3Q12296 706 aa9.11□□□□□ -0.95
NSE3YDR288W SPP1Q03012 353 aa9.1□□□□□ -0.95
NSE3YDR288W ABP1P15891 592 aaKnown RBP9.09□□□□□ -0.95
NSE3YDR288W VHR2P40041 505 aa9.08□□□□□ -0.96
NSE3YDR288W MAK21Q12176 1025 aaKnown RBP9.08□□□□□ -0.96
NSE3YDR288W MSB4Q12317 492 aa9.06□□□□□ -0.96
NSE3YDR288W HTA1P04911 132 aaKnown RBP9.05□□□□□ -0.96
NSE3YDR288W HTA2P04912 132 aa9.05□□□□□ -0.96
NSE3YDR288W COX6P00427 148 aa9.04□□□□□ -0.96
NSE3YDR288W KIC1P38692 1080 aa9.04□□□□□ -0.96
NSE3YDR288W YGR273CP53329 174 aa9.04□□□□□ -0.96
NSE3YDR288W IES2P40154 320 aa9.03□□□□□ -0.96
NSE3YDR288W EAP1P36041 632 aaKnown RBP9.01□□□□□ -0.97
NSE3YDR288W UBP14P38237 781 aaKnown RBP9.01□□□□□ -0.97
NSE3YDR288W YLR326WQ06170 240 aaKnown RBP8.99□□□□□ -0.97
NSE3YDR288W AIR2Q12476 344 aaKnown RBP8.99□□□□□ -0.97
NSE3YDR288W YNR021WP53723 404 aaKnown RBP8.98□□□□□ -0.97
NSE3YDR288W RAD54P32863 898 aa8.97□□□□□ -0.97
NSE3YDR288W SOL3P38858 249 aa8.97□□□□□ -0.97
NSE3YDR288W KEX1P09620 729 aa8.96□□□□□ -0.98
NSE3YDR288W TIF11P38912 153 aaKnown RBP8.96□□□□□ -0.98
NSE3YDR288W YDR090CQ03193 310 aa8.95□□□□□ -0.98
NSE3YDR288W DIT2P21595 489 aa8.94□□□□□ -0.98
NSE3YDR288W YEL023CP39992 682 aa8.94□□□□□ -0.98
NSE3YDR288W TAF7Q05021 590 aa8.94□□□□□ -0.98
NSE3YDR288W FKH1P40466 484 aa8.93□□□□□ -0.98
NSE3YDR288W ULI1P43604 169 aa8.93□□□□□ -0.98
NSE3YDR288W YJL171CP46992 396 aa8.93□□□□□ -0.98
NSE3YDR288W NUP42P49686 430 aaKnown RBP8.93□□□□□ -0.98
NSE3YDR288W TRP5P00931 707 aaKnown RBP8.92□□□□□ -0.98
NSE3YDR288W GLC3P32775 704 aa8.92□□□□□ -0.98
NSE3YDR288W ATF2P53296 535 aa8.91□□□□□ -0.98
NSE3YDR288W AI4P03878 556 aa8.9□□□□□ -0.98
NSE3YDR288W MPH3P0CE00 602 aa8.9□□□□□ -0.98
NSE3YDR288W PCS60P38137 543 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98 RIP-Chip
NSE3YDR288W PTC4P38089 393 aa8.89□□□□□ -0.99
NSE3YDR288W NST1P53935 1240 aa8.88□□□□□ -0.99
NSE3YDR288W KIN1P13185 1064 aa8.87□□□□□ -0.99
NSE3YDR288W JIP4Q03361 876 aa8.87□□□□□ -0.99
NSE3YDR288W AIM7Q12156 149 aa8.86□□□□□ -0.99
NSE3YDR288W DAN4P47179 1161 aa8.85□□□□□ -0.99
NSE3YDR288W LDB19Q12502 818 aa8.84□□□□□ -0.99
NSE3YDR288W RPP1BP10622 106 aaKnown RBP8.82□□□□□ -1
NSE3YDR288W ILV3P39522 585 aaKnown RBP8.81□□□□□ -1
NSE3YDR288W IOC2Q12072 812 aa8.81□□□□□ -1
NSE3YDR288W YNL035CP53962 389 aaKnown RBP8.8□□□□□ -1
NSE3YDR288W PSE1P32337 1089 aaKnown RBP8.79□□□□□ -1
NSE3YDR288W SLI15P38283 698 aa8.79□□□□□ -1
NSE3YDR288W DMA2P53924 522 aa8.79□□□□□ -1
NSE3YDR288W RTG1P32607 177 aa8.76□□□□□ -1.01
NSE3YDR288W ORC6P38826 435 aa8.76□□□□□ -1.01
NSE3YDR288W TFG1P41895 735 aaPredicted RBP8.76□□□□□ -1.01
NSE3YDR288W BMT6Q12291 365 aa8.75□□□□□ -1.01
NSE3YDR288W PML39Q03760 334 aa8.74□□□□□ -1.01
NSE3YDR288W SEC61P32915 480 aa8.72□□□□□ -1.01
NSE3YDR288W TEA1P47988 759 aa8.72□□□□□ -1.01
NSE3YDR288W HGH1P48362 394 aaKnown RBP8.72□□□□□ -1.01
NSE3YDR288W PEX21P50091 288 aa8.72□□□□□ -1.01
NSE3YDR288W PEX29Q03370 554 aa8.71□□□□□ -1.02
NSE3YDR288W CSC1Q06538 782 aa8.71□□□□□ -1.02
NSE3YDR288W CDC73Q06697 393 aa8.7□□□□□ -1.02
NSE3YDR288W RGR1P19263 1082 aa8.69□□□□□ -1.02
NSE3YDR288W MID1P41821 548 aa8.69□□□□□ -1.02
NSE3YDR288W NCR1Q12200 1170 aa8.69□□□□□ -1.02
NSE3YDR288W MVP1P40959 511 aaKnown RBP8.68□□□□□ -1.02
NSE3YDR288W CLB5P30283 435 aa8.67□□□□□ -1.02
NSE3YDR288W GUA1P38625 525 aaKnown RBP8.67□□□□□ -1.02
NSE3YDR288W DPL1Q05567 589 aa8.66□□□□□ -1.02
NSE3YDR288W TFB4Q12004 338 aa8.65□□□□□ -1.02
NSE3YDR288W YPR109WQ06104 294 aa8.64□□□□□ -1.03
NSE3YDR288W MPC54Q08550 464 aa8.63□□□□□ -1.03
NSE3YDR288W GAP1P19145 602 aaPredicted RBP8.62□□□□□ -1.03
NSE3YDR288W YDL129WQ07555 291 aa8.62□□□□□ -1.03
NSE3YDR288W TUM1Q08686 304 aaKnown RBP8.62□□□□□ -1.03
NSE3YDR288W SSA2P10592 639 aaKnown RBP8.61□□□□□ -1.03
NSE3YDR288W CSN12P47130 423 aa8.61□□□□□ -1.03
NSE3YDR288W YMR196WQ04336 1088 aa8.6□□□□□ -1.03
NSE3YDR288W ISU2Q12056 156 aa8.59□□□□□ -1.03
NSE3YDR288W NMA111P53920 997 aa8.58□□□□□ -1.04
NSE3YDR288W HPC2Q01448 625 aa8.58□□□□□ -1.04
NSE3YDR288W YRR1Q12172 810 aa8.58□□□□□ -1.04
NSE3YDR288W SAP30P38429 201 aa8.57□□□□□ -1.04
NSE3YDR288W BRL1P38770 471 aa8.57□□□□□ -1.04
NSE3YDR288W NIS1P53939 407 aa8.54□□□□□ -1.04
NSE3YDR288W FPK1P53739 893 aa8.53□□□□□ -1.04
NSE3YDR288W TFB3Q03290 321 aa8.53□□□□□ -1.04
NSE3YDR288W TYW1Q08960 810 aaKnown RBP8.53□□□□□ -1.04
NSE3YDR288W GLN1P32288 370 aaKnown RBP8.52□□□□□ -1.05
NSE3YDR288W HAP5Q02516 242 aa8.5□□□□□ -1.05
NSE3YDR288W MMP1Q12372 583 aa8.5□□□□□ -1.05
NSE3YDR288W HST2P53686 357 aa8.49□□□□□ -1.05
NSE3YDR288W ELP4Q02884 456 aaKnown RBP8.49□□□□□ -1.05
NSE3YDR288W NPL4P33755 580 aa8.48□□□□□ -1.05
NSE3YDR288W ARH1P48360 493 aa8.48□□□□□ -1.05
NSE3YDR288W KTR1P27810 393 aaKnown RBP8.47□□□□□ -1.05
NSE3YDR288W RLF2Q12495 606 aa8.47□□□□□ -1.05
NSE3YDR288W SCJ1P25303 377 aa8.45□□□□□ -1.06
NSE3YDR288W NUD1P32336 851 aa8.45□□□□□ -1.06
NSE3YDR288W PKH3Q03306 898 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms