RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeastyeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL4YDR254W SAP30P38429 201 aa9.93□□□□□ -0.82
CHL4YDR254W PTC4P38089 393 aa9.91□□□□□ -0.82
CHL4YDR254W YDL129WQ07555 291 aa9.9□□□□□ -0.82
CHL4YDR254W YEL023CP39992 682 aa9.89□□□□□ -0.83
CHL4YDR254W CHL1P22516 861 aaPredicted RBP9.84□□□□□ -0.83
CHL4YDR254W GRE2Q12068 342 aaKnown RBP9.82□□□□□ -0.84
CHL4YDR254W PRE3P38624 215 aa9.79□□□□□ -0.84
CHL4YDR254W BCK2P33306 851 aa9.78□□□□□ -0.84
CHL4YDR254W MIF2P35201 549 aa9.78□□□□□ -0.84
CHL4YDR254W MAK11P20484 414 aaKnown RBP9.77□□□□□ -0.84
CHL4YDR254W RAM2P29703 316 aa9.74□□□□□ -0.85
CHL4YDR254W ATH1P48016 1211 aa9.74□□□□□ -0.85
CHL4YDR254W PTC3P34221 468 aaKnown RBP9.72□□□□□ -0.85
CHL4YDR254W GUT1P32190 709 aa9.71□□□□□ -0.86
CHL4YDR254W PML39Q03760 334 aa9.71□□□□□ -0.86
CHL4YDR254W EDS1P38073 919 aa9.69□□□□□ -0.86
CHL4YDR254W COQ8P27697 501 aa9.63□□□□□ -0.87
CHL4YDR254W ELP4Q02884 456 aaKnown RBP9.63□□□□□ -0.87
CHL4YDR254W VRP1P37370 817 aa9.6□□□□□ -0.87
CHL4YDR254W YDR344CQ05510 147 aa9.59□□□□□ -0.87
CHL4YDR254W NST1P53935 1240 aa9.57□□□□□ -0.88
CHL4YDR254W XDJ1P39102 459 aa9.56□□□□□ -0.88
CHL4YDR254W ARH1P48360 493 aa9.56□□□□□ -0.88
CHL4YDR254W MID1P41821 548 aa9.55□□□□□ -0.88
CHL4YDR254W SOL3P38858 249 aa9.54□□□□□ -0.88
CHL4YDR254W AI4P03878 556 aa9.52□□□□□ -0.88
CHL4YDR254W MPH3P0CE00 602 aa9.52□□□□□ -0.88
CHL4YDR254W PEX29Q03370 554 aa9.5□□□□□ -0.89
CHL4YDR254W NOP53Q12080 455 aaKnown RBP9.5□□□□□ -0.89
CHL4YDR254W SPT23P35210 1082 aa9.46□□□□□ -0.9
CHL4YDR254W DMA1P38823 416 aa9.43□□□□□ -0.9
CHL4YDR254W YGR273CP53329 174 aa9.42□□□□□ -0.9
CHL4YDR254W ILV3P39522 585 aaKnown RBP9.41□□□□□ -0.9
CHL4YDR254W HAP5Q02516 242 aa9.41□□□□□ -0.9
CHL4YDR254W LEO1P38439 464 aa9.38□□□□□ -0.91
CHL4YDR254W DPS1P04802 557 aaKnown RBP9.37□□□□□ -0.91
CHL4YDR254W BNI4P53858 892 aa9.36□□□□□ -0.91
CHL4YDR254W MPC54Q08550 464 aa9.34□□□□□ -0.91
CHL4YDR254W PTC2P39966 464 aaKnown RBP9.33□□□□□ -0.92
CHL4YDR254W YML082WQ04533 649 aaKnown RBP9.32□□□□□ -0.92
CHL4YDR254W NMA111P53920 997 aa9.3□□□□□ -0.92
CHL4YDR254W SLI15P38283 698 aa9.29□□□□□ -0.92
CHL4YDR254W DPL1Q05567 589 aa9.26□□□□□ -0.93
CHL4YDR254W KEX1P09620 729 aa9.21□□□□□ -0.94
CHL4YDR254W SET1P38827 1080 aaKnown RBP9.19□□□□□ -0.94
CHL4YDR254W ISU2Q12056 156 aa9.17□□□□□ -0.94
CHL4YDR254W CDC73Q06697 393 aa9.12□□□□□ -0.95
CHL4YDR254W UBP14P38237 781 aaKnown RBP9.11□□□□□ -0.95
CHL4YDR254W YLR326WQ06170 240 aaKnown RBP9.11□□□□□ -0.95
CHL4YDR254W YPR015CQ12531 247 aa9.1□□□□□ -0.95
CHL4YDR254W VHR2P40041 505 aa9.09□□□□□ -0.95
CHL4YDR254W RAM1P22007 431 aa9.08□□□□□ -0.96
CHL4YDR254W SRC1Q03707 834 aa9.08□□□□□ -0.96
CHL4YDR254W GYP1Q08484 637 aa9.06□□□□□ -0.96
CHL4YDR254W RAD54P32863 898 aa9.05□□□□□ -0.96
CHL4YDR254W RPP1BP10622 106 aaKnown RBP9.04□□□□□ -0.96
CHL4YDR254W PCS60P38137 543 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
CHL4YDR254W RAS1P01119 309 aa9.02□□□□□ -0.97
CHL4YDR254W PDR1P12383 1068 aa8.99□□□□□ -0.97
CHL4YDR254W SAS4Q04003 481 aa8.98□□□□□ -0.97
CHL4YDR254W IFH1P39520 1085 aa8.97□□□□□ -0.97
CHL4YDR254W AMS1P22855 1083 aa8.95□□□□□ -0.98
CHL4YDR254W KIC1P38692 1080 aa8.94□□□□□ -0.98
CHL4YDR254W YDR090CQ03193 310 aa8.91□□□□□ -0.98
CHL4YDR254W PEX21P50091 288 aa8.9□□□□□ -0.98
CHL4YDR254W TRK1P12685 1235 aa8.86□□□□□ -0.99
CHL4YDR254W MRF1P30775 413 aaPredicted RBP8.86□□□□□ -0.99
CHL4YDR254W YRR1Q12172 810 aa8.86□□□□□ -0.99
CHL4YDR254W SDH2P21801 266 aa8.86□□□□□ -0.99
CHL4YDR254W YEL077CQ3E7X8 1277 aa8.86□□□□□ -0.99
CHL4YDR254W REF2P42073 533 aaPredicted RBP8.85□□□□□ -0.99
CHL4YDR254W CSC1Q06538 782 aa8.84□□□□□ -0.99
CHL4YDR254W BUD20Q08004 166 aaPredicted RBP8.84□□□□□ -0.99
CHL4YDR254W PRT1P06103 763 aaKnown RBP8.83□□□□□ -1
CHL4YDR254W TFB4Q12004 338 aa8.83□□□□□ -1
CHL4YDR254W SAS10Q12136 610 aaPredicted RBP8.83□□□□□ -1
CHL4YDR254W GAP1P19145 602 aaPredicted RBP8.81□□□□□ -1
CHL4YDR254W YPR148CQ06523 435 aa8.81□□□□□ -1
CHL4YDR254W TUM1Q08686 304 aaKnown RBP8.79□□□□□ -1
CHL4YDR254W AIM44Q99299 758 aa8.79□□□□□ -1
CHL4YDR254W URN1Q06525 465 aaKnown RBP8.78□□□□□ -1
CHL4YDR254W STR2P47164 639 aa8.77□□□□□ -1.01
CHL4YDR254W NAP1P25293 417 aaKnown RBP8.76□□□□□ -1.01
CHL4YDR254W NUD1P32336 851 aa8.76□□□□□ -1.01
CHL4YDR254W RGA1P39083 1007 aa8.76□□□□□ -1.01
CHL4YDR254W ISM1P48526 1002 aa8.76□□□□□ -1.01
CHL4YDR254W NPL4P33755 580 aa8.75□□□□□ -1.01
CHL4YDR254W ERG12P07277 443 aa8.74□□□□□ -1.01
CHL4YDR254W LEU3P08638 886 aa8.73□□□□□ -1.01
CHL4YDR254W ORC6P38826 435 aa8.73□□□□□ -1.01
CHL4YDR254W VPS70P47161 811 aa8.73□□□□□ -1.01
CHL4YDR254W MAK21Q12176 1025 aaKnown RBP8.72□□□□□ -1.01
CHL4YDR254W COX6P00427 148 aa8.71□□□□□ -1.02
CHL4YDR254W RGA2Q06407 1009 aa8.71□□□□□ -1.02
CHL4YDR254W GCD11P32481 527 aaKnown RBP8.7□□□□□ -1.02
CHL4YDR254W MVP1P40959 511 aaKnown RBP8.67□□□□□ -1.02
CHL4YDR254W SPT16P32558 1035 aaKnown RBP8.66□□□□□ -1.02
CHL4YDR254W IOC4Q04213 475 aa8.66□□□□□ -1.02
CHL4YDR254W CST6P40535 587 aa8.62□□□□□ -1.03
CHL4YDR254W YPR109WQ06104 294 aa8.62□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms