RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W REF2P42073 533 aaPredicted RBP8.02□□□□□ -1.13
HSP42YDR171W SOL3P38858 249 aa8.01□□□□□ -1.13
HSP42YDR171W VHR2P40041 505 aa8.01□□□□□ -1.13
HSP42YDR171W TIF11P38912 153 aaKnown RBP8□□□□□ -1.13
HSP42YDR171W YGR273CP53329 174 aa8□□□□□ -1.13
HSP42YDR171W TRP5P00931 707 aaKnown RBP7.99□□□□□ -1.13
HSP42YDR171W LEU3P08638 886 aa7.99□□□□□ -1.13
HSP42YDR171W EAP1P36041 632 aaKnown RBP7.99□□□□□ -1.13
HSP42YDR171W ULI1P43604 169 aa7.99□□□□□ -1.13
HSP42YDR171W YEL023CP39992 682 aa7.96□□□□□ -1.14
HSP42YDR171W NST1P53935 1240 aa7.96□□□□□ -1.14
HSP42YDR171W DSF2P38213 736 aa7.95□□□□□ -1.14
HSP42YDR171W UBP14P38237 781 aaKnown RBP7.95□□□□□ -1.14
HSP42YDR171W YLR326WQ06170 240 aaKnown RBP7.95□□□□□ -1.14
HSP42YDR171W KEX1P09620 729 aa7.92□□□□□ -1.14
HSP42YDR171W YDR090CQ03193 310 aa7.92□□□□□ -1.14
HSP42YDR171W IOC2Q12072 812 aa7.92□□□□□ -1.14
HSP42YDR171W MAM3Q12296 706 aa7.91□□□□□ -1.14
HSP42YDR171W ILV3P39522 585 aaKnown RBP7.9□□□□□ -1.14
HSP42YDR171W LDB19Q12502 818 aa7.9□□□□□ -1.14
HSP42YDR171W COX6P00427 148 aa7.89□□□□□ -1.15
HSP42YDR171W IES2P40154 320 aa7.89□□□□□ -1.15
HSP42YDR171W MAK21Q12176 1025 aaKnown RBP7.89□□□□□ -1.15
HSP42YDR171W MPH3P0CE00 602 aa7.88□□□□□ -1.15
HSP42YDR171W PTC4P38089 393 aa7.88□□□□□ -1.15
HSP42YDR171W AI4P03878 556 aa7.87□□□□□ -1.15
HSP42YDR171W RAD54P32863 898 aa7.87□□□□□ -1.15
HSP42YDR171W PCS60P38137 543 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
HSP42YDR171W KIC1P38692 1080 aa7.87□□□□□ -1.15
HSP42YDR171W JIP4Q03361 876 aa7.86□□□□□ -1.15
HSP42YDR171W DAN4P47179 1161 aa7.85□□□□□ -1.15
HSP42YDR171W YNL035CP53962 389 aaKnown RBP7.85□□□□□ -1.15
HSP42YDR171W RTG1P32607 177 aa7.84□□□□□ -1.15
HSP42YDR171W LEO1P38439 464 aa7.83□□□□□ -1.16
HSP42YDR171W DIT2P21595 489 aa7.81□□□□□ -1.16
HSP42YDR171W NUP42P49686 430 aaKnown RBP7.81□□□□□ -1.16
HSP42YDR171W SLI15P38283 698 aa7.8□□□□□ -1.16
HSP42YDR171W RPN1P38764 993 aaKnown RBP7.79□□□□□ -1.16
HSP42YDR171W PML39Q03760 334 aa7.78□□□□□ -1.16
HSP42YDR171W GLC3P32775 704 aa7.77□□□□□ -1.17
HSP42YDR171W MID1P41821 548 aa7.77□□□□□ -1.17
HSP42YDR171W SEC61P32915 480 aa7.76□□□□□ -1.17
HSP42YDR171W FKH1P40466 484 aa7.75□□□□□ -1.17
HSP42YDR171W YNR021WP53723 404 aaKnown RBP7.75□□□□□ -1.17
HSP42YDR171W NCR1Q12200 1170 aa7.75□□□□□ -1.17
HSP42YDR171W SIS1P25294 352 aaKnown RBP7.74□□□□□ -1.17
HSP42YDR171W ORC6P38826 435 aa7.74□□□□□ -1.17
HSP42YDR171W TFG1P41895 735 aaPredicted RBP7.73□□□□□ -1.17
HSP42YDR171W CDC73Q06697 393 aa7.73□□□□□ -1.17
HSP42YDR171W PEX29Q03370 554 aa7.69□□□□□ -1.18
HSP42YDR171W YDL129WQ07555 291 aa7.69□□□□□ -1.18
HSP42YDR171W AIR2Q12476 344 aaKnown RBP7.69□□□□□ -1.18
HSP42YDR171W PSE1P32337 1089 aaKnown RBP7.67□□□□□ -1.18
HSP42YDR171W ATF2P53296 535 aa7.67□□□□□ -1.18
HSP42YDR171W MPC54Q08550 464 aa7.67□□□□□ -1.18
HSP42YDR171W SAP30P38429 201 aa7.66□□□□□ -1.18
HSP42YDR171W RPP1BP10622 106 aaKnown RBP7.65□□□□□ -1.18
HSP42YDR171W KIN1P13185 1064 aa7.65□□□□□ -1.18
HSP42YDR171W DPL1Q05567 589 aa7.65□□□□□ -1.18
HSP42YDR171W GAP1P19145 602 aaPredicted RBP7.64□□□□□ -1.19
HSP42YDR171W RGR1P19263 1082 aa7.64□□□□□ -1.19
HSP42YDR171W MVP1P40959 511 aaKnown RBP7.64□□□□□ -1.19
HSP42YDR171W AIM7Q12156 149 aa7.64□□□□□ -1.19
HSP42YDR171W PEX21P50091 288 aa7.62□□□□□ -1.19
HSP42YDR171W YDR344CQ05510 147 aa7.62□□□□□ -1.19
HSP42YDR171W CSC1Q06538 782 aa7.62□□□□□ -1.19
HSP42YDR171W NMA111P53920 997 aa7.6□□□□□ -1.19
HSP42YDR171W YJL171CP46992 396 aa7.59□□□□□ -1.19
HSP42YDR171W TEA1P47988 759 aa7.58□□□□□ -1.2
HSP42YDR171W YPR109WQ06104 294 aa7.58□□□□□ -1.2
HSP42YDR171W TUM1Q08686 304 aaKnown RBP7.58□□□□□ -1.2
HSP42YDR171W TFB4Q12004 338 aa7.58□□□□□ -1.2
HSP42YDR171W BMT6Q12291 365 aa7.58□□□□□ -1.2
HSP42YDR171W ISU2Q12056 156 aa7.57□□□□□ -1.2
HSP42YDR171W YRR1Q12172 810 aa7.56□□□□□ -1.2
HSP42YDR171W HAP5Q02516 242 aa7.55□□□□□ -1.2
HSP42YDR171W ARH1P48360 493 aa7.54□□□□□ -1.2
HSP42YDR171W CLB5P30283 435 aa7.53□□□□□ -1.2
HSP42YDR171W ELP4Q02884 456 aaKnown RBP7.53□□□□□ -1.2
HSP42YDR171W PDR1P12383 1068 aa7.51□□□□□ -1.21
HSP42YDR171W GUA1P38625 525 aaKnown RBP7.51□□□□□ -1.21
HSP42YDR171W DMA2P53924 522 aa7.5□□□□□ -1.21
HSP42YDR171W NIS1P53939 407 aa7.5□□□□□ -1.21
HSP42YDR171W PRE3P38624 215 aa7.47□□□□□ -1.21
HSP42YDR171W YMR196WQ04336 1088 aa7.47□□□□□ -1.21
HSP42YDR171W NUD1P32336 851 aa7.46□□□□□ -1.22
HSP42YDR171W FPK1P53739 893 aa7.46□□□□□ -1.22
HSP42YDR171W TYW1Q08960 810 aaKnown RBP7.46□□□□□ -1.22
HSP42YDR171W SPT23P35210 1082 aa7.45□□□□□ -1.22
HSP42YDR171W CSN12P47130 423 aa7.45□□□□□ -1.22
HSP42YDR171W BNI4P53858 892 aa7.45□□□□□ -1.22
HSP42YDR171W SCJ1P25303 377 aa7.43□□□□□ -1.22
HSP42YDR171W KTR1P27810 393 aaKnown RBP7.43□□□□□ -1.22
HSP42YDR171W CHL1P22516 861 aaPredicted RBP7.42□□□□□ -1.22
HSP42YDR171W PTC2P39966 464 aaKnown RBP7.42□□□□□ -1.22
HSP42YDR171W KEX2P13134 814 aa7.41□□□□□ -1.22
HSP42YDR171W RAM1P22007 431 aa7.41□□□□□ -1.22
HSP42YDR171W STR2P47164 639 aa7.41□□□□□ -1.22
HSP42YDR171W SIT4P20604 311 aa7.4□□□□□ -1.22
HSP42YDR171W NPL4P33755 580 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms