RNA–Protein interactions for RNA: YDR125C

ECM18, Transcript of Protein of unknown function, yeastyeast

Gene ECM18, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM18YDR125C LDB19Q12502 818 aa9.07□□□□□ -0.96
ECM18YDR125C VPS70P47161 811 aa9.06□□□□□ -0.96
ECM18YDR125C YPR148CQ06523 435 aa9.05□□□□□ -0.96
ECM18YDR125C SAS10Q12136 610 aaPredicted RBP9.04□□□□□ -0.96
ECM18YDR125C YEL023CP39992 682 aa9.02□□□□□ -0.97
ECM18YDR125C SOL3P38858 249 aa9.01□□□□□ -0.97
ECM18YDR125C RTG1P32607 177 aa8.99□□□□□ -0.97
ECM18YDR125C PTC4P38089 393 aa8.99□□□□□ -0.97
ECM18YDR125C YGR273CP53329 174 aa8.99□□□□□ -0.97
ECM18YDR125C YNL035CP53962 389 aaKnown RBP8.99□□□□□ -0.97
ECM18YDR125C JIP4Q03361 876 aa8.98□□□□□ -0.97
ECM18YDR125C NST1P53935 1240 aa8.97□□□□□ -0.97
ECM18YDR125C FKH1P40466 484 aa8.95□□□□□ -0.98
ECM18YDR125C DAN4P47179 1161 aa8.95□□□□□ -0.98
ECM18YDR125C SEC61P32915 480 aa8.92□□□□□ -0.98
ECM18YDR125C NCR1Q12200 1170 aa8.92□□□□□ -0.98
ECM18YDR125C AIR2Q12476 344 aaKnown RBP8.92□□□□□ -0.98
ECM18YDR125C VHR2P40041 505 aa8.91□□□□□ -0.98
ECM18YDR125C REF2P42073 533 aaPredicted RBP8.9□□□□□ -0.98
ECM18YDR125C CKB1P43639 278 aa8.9□□□□□ -0.98
ECM18YDR125C MPH3P0CE00 602 aa8.89□□□□□ -0.99
ECM18YDR125C AI4P03878 556 aa8.88□□□□□ -0.99
ECM18YDR125C UBP14P38237 781 aaKnown RBP8.88□□□□□ -0.99
ECM18YDR125C ILV3P39522 585 aaKnown RBP8.87□□□□□ -0.99
ECM18YDR125C TFG1P41895 735 aaPredicted RBP8.87□□□□□ -0.99
ECM18YDR125C KEX1P09620 729 aa8.86□□□□□ -0.99
ECM18YDR125C YLR326WQ06170 240 aaKnown RBP8.86□□□□□ -0.99
ECM18YDR125C YJL171CP46992 396 aa8.84□□□□□ -0.99
ECM18YDR125C PML39Q03760 334 aa8.84□□□□□ -0.99
ECM18YDR125C SPB4P25808 606 aaPredicted RBP8.82□□□□□ -1
ECM18YDR125C PBS2P08018 668 aa8.81□□□□□ -1
ECM18YDR125C YDR090CQ03193 310 aa8.81□□□□□ -1
ECM18YDR125C RAD54P32863 898 aa8.79□□□□□ -1
ECM18YDR125C PCS60P38137 543 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
ECM18YDR125C MID1P41821 548 aa8.79□□□□□ -1
ECM18YDR125C YDL129WQ07555 291 aa8.79□□□□□ -1
ECM18YDR125C SAP30P38429 201 aa8.78□□□□□ -1
ECM18YDR125C SLI15P38283 698 aa8.77□□□□□ -1.01
ECM18YDR125C BMT6Q12291 365 aa8.77□□□□□ -1.01
ECM18YDR125C KIC1P38692 1080 aa8.76□□□□□ -1.01
ECM18YDR125C COX6P00427 148 aa8.75□□□□□ -1.01
ECM18YDR125C MAK21Q12176 1025 aaKnown RBP8.75□□□□□ -1.01
ECM18YDR125C DSF2P38213 736 aa8.73□□□□□ -1.01
ECM18YDR125C PEX29Q03370 554 aa8.71□□□□□ -1.02
ECM18YDR125C MAM3Q12296 706 aa8.7□□□□□ -1.02
ECM18YDR125C CDC73Q06697 393 aa8.68□□□□□ -1.02
ECM18YDR125C MPC54Q08550 464 aa8.67□□□□□ -1.02
ECM18YDR125C YDR344CQ05510 147 aa8.65□□□□□ -1.02
ECM18YDR125C IES2P40154 320 aa8.64□□□□□ -1.03
ECM18YDR125C DPL1Q05567 589 aa8.64□□□□□ -1.03
ECM18YDR125C NMA111P53920 997 aa8.61□□□□□ -1.03
ECM18YDR125C ELP4Q02884 456 aaKnown RBP8.61□□□□□ -1.03
ECM18YDR125C RPP1BP10622 106 aaKnown RBP8.61□□□□□ -1.03
ECM18YDR125C ARH1P48360 493 aa8.61□□□□□ -1.03
ECM18YDR125C ORC6P38826 435 aa8.6□□□□□ -1.03
ECM18YDR125C PRE3P38624 215 aa8.58□□□□□ -1.04
ECM18YDR125C NUP42P49686 430 aaKnown RBP8.58□□□□□ -1.04
ECM18YDR125C DIT2P21595 489 aa8.57□□□□□ -1.04
ECM18YDR125C HAP5Q02516 242 aa8.57□□□□□ -1.04
ECM18YDR125C LEU3P08638 886 aa8.56□□□□□ -1.04
ECM18YDR125C CHL1P22516 861 aaPredicted RBP8.56□□□□□ -1.04
ECM18YDR125C ISU2Q12056 156 aa8.56□□□□□ -1.04
ECM18YDR125C PEX21P50091 288 aa8.54□□□□□ -1.04
ECM18YDR125C CSC1Q06538 782 aa8.54□□□□□ -1.04
ECM18YDR125C GAP1P19145 602 aaPredicted RBP8.53□□□□□ -1.04
ECM18YDR125C MVP1P40959 511 aaKnown RBP8.51□□□□□ -1.05
ECM18YDR125C RGR1P19263 1082 aa8.5□□□□□ -1.05
ECM18YDR125C PSE1P32337 1089 aaKnown RBP8.5□□□□□ -1.05
ECM18YDR125C SPT23P35210 1082 aa8.49□□□□□ -1.05
ECM18YDR125C TUM1Q08686 304 aaKnown RBP8.49□□□□□ -1.05
ECM18YDR125C TFB4Q12004 338 aa8.49□□□□□ -1.05
ECM18YDR125C BNI4P53858 892 aa8.48□□□□□ -1.05
ECM18YDR125C YRR1Q12172 810 aa8.48□□□□□ -1.05
ECM18YDR125C YNR021WP53723 404 aaKnown RBP8.47□□□□□ -1.05
ECM18YDR125C PDR1P12383 1068 aa8.46□□□□□ -1.06
ECM18YDR125C GLC3P32775 704 aa8.46□□□□□ -1.06
ECM18YDR125C YPR109WQ06104 294 aa8.46□□□□□ -1.06
ECM18YDR125C PTC2P39966 464 aaKnown RBP8.44□□□□□ -1.06
ECM18YDR125C ATF2P53296 535 aa8.42□□□□□ -1.06
ECM18YDR125C RGA2Q06407 1009 aa8.41□□□□□ -1.06
ECM18YDR125C RPN1P38764 993 aaKnown RBP8.39□□□□□ -1.07
ECM18YDR125C TEA1P47988 759 aa8.39□□□□□ -1.07
ECM18YDR125C YML082WQ04533 649 aaKnown RBP8.38□□□□□ -1.07
ECM18YDR125C RAM1P22007 431 aa8.37□□□□□ -1.07
ECM18YDR125C VRP1P37370 817 aa8.37□□□□□ -1.07
ECM18YDR125C CLB5P30283 435 aa8.36□□□□□ -1.07
ECM18YDR125C YPR015CQ12531 247 aa8.36□□□□□ -1.07
ECM18YDR125C NUD1P32336 851 aa8.35□□□□□ -1.07
ECM18YDR125C BCK2P33306 851 aa8.35□□□□□ -1.07
ECM18YDR125C AIM7Q12156 149 aa8.34□□□□□ -1.07
ECM18YDR125C NPL4P33755 580 aa8.33□□□□□ -1.08
ECM18YDR125C STR2P47164 639 aa8.32□□□□□ -1.08
ECM18YDR125C ISM1P48526 1002 aa8.32□□□□□ -1.08
ECM18YDR125C NIS1P53939 407 aa8.3□□□□□ -1.08
ECM18YDR125C BUD20Q08004 166 aaPredicted RBP8.3□□□□□ -1.08
ECM18YDR125C KIN1P13185 1064 aa8.29□□□□□ -1.08
ECM18YDR125C GCD11P32481 527 aaKnown RBP8.27□□□□□ -1.09
ECM18YDR125C LEO1P38439 464 aa8.27□□□□□ -1.09
ECM18YDR125C KEX2P13134 814 aa8.26□□□□□ -1.09
ECM18YDR125C FPK1P53739 893 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms