RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W GLC3P32775 704 aa7.09□□□□□ -1.27
FOB1YDR110W KIP3P53086 805 aaKnown RBP7.09□□□□□ -1.27
FOB1YDR110W YAF9P53930 226 aa7.09□□□□□ -1.27
FOB1YDR110W YPR148CQ06523 435 aa7.09□□□□□ -1.27
FOB1YDR110W DSF2P38213 736 aa7.08□□□□□ -1.28
FOB1YDR110W NAB3P38996 802 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
FOB1YDR110W SEN54Q02825 467 aaPredicted RBP7.07□□□□□ -1.28
FOB1YDR110W AIM21P40563 679 aa7.07□□□□□ -1.28
FOB1YDR110W MGA2P40578 1113 aa7.06□□□□□ -1.28
FOB1YDR110W SPT21P35209 758 aa7.04□□□□□ -1.28
FOB1YDR110W BRE1Q07457 700 aaKnown RBP7.04□□□□□ -1.28
FOB1YDR110W HEM3P28789 327 aa7.03□□□□□ -1.28
FOB1YDR110W TOM20P35180 183 aa7.03□□□□□ -1.28
FOB1YDR110W PMC1P38929 1173 aaPredicted RBP7.03□□□□□ -1.28
FOB1YDR110W AIM7Q12156 149 aa7.03□□□□□ -1.28
FOB1YDR110W NMD2P38798 1089 aaKnown RBP7.02□□□□□ -1.29
FOB1YDR110W SET1P38827 1080 aaKnown RBP7.02□□□□□ -1.29
FOB1YDR110W GAL11P19659 1081 aa7.01□□□□□ -1.29
FOB1YDR110W TY4A-JP47023 414 aa7.01□□□□□ -1.29
FOB1YDR110W FPR4Q06205 392 aaPredicted RBP7.01□□□□□ -1.29
FOB1YDR110W RPA135P22138 1203 aaKnown RBP7.01□□□□□ -1.29
FOB1YDR110W TFB3Q03290 321 aa7.01□□□□□ -1.29
FOB1YDR110W CST9Q06032 482 aa7.01□□□□□ -1.29
FOB1YDR110W CST6P40535 587 aa7□□□□□ -1.29
FOB1YDR110W KOG1P38873 1557 aa6.99□□□□□ -1.29
FOB1YDR110W KEX1P09620 729 aa6.98□□□□□ -1.29
FOB1YDR110W PBS2P08018 668 aa6.98□□□□□ -1.29
FOB1YDR110W HPC2Q01448 625 aa6.98□□□□□ -1.29
FOB1YDR110W PSH1Q12161 406 aa6.98□□□□□ -1.29
FOB1YDR110W RAD2P07276 1031 aa6.96□□□□□ -1.29
FOB1YDR110W PKC1P24583 1151 aa6.96□□□□□ -1.29
FOB1YDR110W RNH70P53331 553 aa6.96□□□□□ -1.29
FOB1YDR110W MPE1P35728 441 aaKnown RBP6.96□□□□□ -1.3
FOB1YDR110W RPT2P40327 437 aaKnown RBP6.96□□□□□ -1.3
FOB1YDR110W NHA1Q99271 985 aa6.96□□□□□ -1.3
FOB1YDR110W DAL5P15365 543 aa6.95□□□□□ -1.3
FOB1YDR110W SSA4P22202 642 aaKnown RBP6.95□□□□□ -1.3
FOB1YDR110W GLN1P32288 370 aaKnown RBP6.95□□□□□ -1.3
FOB1YDR110W RPS0AP32905 252 aaKnown RBP6.95□□□□□ -1.3
FOB1YDR110W ITT1Q04638 464 aa6.95□□□□□ -1.3
FOB1YDR110W SSA2P10592 639 aaKnown RBP6.94□□□□□ -1.3
FOB1YDR110W TSR4P25040 408 aa6.94□□□□□ -1.3
FOB1YDR110W CDC3P32457 520 aaKnown RBP6.94□□□□□ -1.3
FOB1YDR110W CAB3P36076 571 aa6.94□□□□□ -1.3
FOB1YDR110W MPP10P47083 593 aaKnown RBP6.94□□□□□ -1.3
FOB1YDR110W GIR2Q03768 265 aaPredicted RBP6.94□□□□□ -1.3
FOB1YDR110W DIT2P21595 489 aa6.93□□□□□ -1.3
FOB1YDR110W BIM1P40013 344 aa6.93□□□□□ -1.3
FOB1YDR110W TPM2P40414 161 aa6.93□□□□□ -1.3
FOB1YDR110W YIL055CP40523 627 aaKnown RBP6.93□□□□□ -1.3
FOB1YDR110W NNF1P47149 201 aa6.93□□□□□ -1.3
FOB1YDR110W ALD2P47771 506 aa6.93□□□□□ -1.3
FOB1YDR110W RAM2P29703 316 aa6.92□□□□□ -1.3
FOB1YDR110W YDL121CQ07541 149 aa6.92□□□□□ -1.3
FOB1YDR110W HSL1P34244 1518 aa6.91□□□□□ -1.3
FOB1YDR110W ATG32P40458 529 aa6.9□□□□□ -1.3
FOB1YDR110W YOL057WQ08225 711 aa6.9□□□□□ -1.3
FOB1YDR110W NOB1Q08444 459 aaKnown RBP6.9□□□□□ -1.3
FOB1YDR110W SPT6P23615 1451 aaKnown RBP6.9□□□□□ -1.3
FOB1YDR110W SPT16P32558 1035 aaKnown RBP6.9□□□□□ -1.31
FOB1YDR110W NUP42P49686 430 aaKnown RBP6.9□□□□□ -1.31
FOB1YDR110W CPS1P27614 576 aa6.89□□□□□ -1.31
FOB1YDR110W ERP2P39704 215 aa6.89□□□□□ -1.31
FOB1YDR110W RPL34AP87262 121 aaPredicted RBP6.89□□□□□ -1.31
FOB1YDR110W TAF13P11747 167 aa6.88□□□□□ -1.31
FOB1YDR110W VMA4P22203 233 aaKnown RBP6.88□□□□□ -1.31
FOB1YDR110W TIF4632P39936 914 aaKnown RBP6.88□□□□□ -1.31
FOB1YDR110W BOI2P39969 1040 aa6.88□□□□□ -1.31
FOB1YDR110W IPL1P38991 367 aa6.87□□□□□ -1.31
FOB1YDR110W IES2P40154 320 aa6.87□□□□□ -1.31
FOB1YDR110W HAT1Q12341 374 aa6.87□□□□□ -1.31
FOB1YDR110W YJL007CP47080 104 aa6.87□□□□□ -1.31
FOB1YDR110W ECM16Q04217 1267 aaKnown RBP6.87□□□□□ -1.31
FOB1YDR110W ERG12P07277 443 aa6.86□□□□□ -1.31
FOB1YDR110W REB1P21538 810 aa6.85□□□□□ -1.31
FOB1YDR110W POL5P39985 1022 aaKnown RBP6.85□□□□□ -1.31
FOB1YDR110W ISW2Q08773 1120 aa6.85□□□□□ -1.31
FOB1YDR110W SSB1P11484 613 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W RRP14P36080 434 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W SSB2P40150 613 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W YOL098CQ12496 1037 aa6.84□□□□□ -1.31
FOB1YDR110W PPG1P32838 368 aa6.84□□□□□ -1.31
FOB1YDR110W DNM1P54861 757 aa6.84□□□□□ -1.31
FOB1YDR110W TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
FOB1YDR110W BIO2P32451 375 aa6.83□□□□□ -1.32
FOB1YDR110W DEF1P35732 738 aaKnown RBP6.83□□□□□ -1.32
FOB1YDR110W RRP15Q06511 250 aaPredicted RBP6.83□□□□□ -1.32
FOB1YDR110W MAK21Q12176 1025 aaKnown RBP6.83□□□□□ -1.32
FOB1YDR110W SPA2P23201 1466 aaKnown RBP6.82□□□□□ -1.32
FOB1YDR110W FPR3P38911 411 aaKnown RBP6.82□□□□□ -1.32
FOB1YDR110W TLG1Q03322 224 aa6.82□□□□□ -1.32
FOB1YDR110W TTI1P36097 1038 aa6.81□□□□□ -1.32
FOB1YDR110W RPG1P38249 964 aaKnown RBP6.81□□□□□ -1.32
FOB1YDR110W YMR196WQ04336 1088 aa6.81□□□□□ -1.32
FOB1YDR110W PSK2Q08217 1101 aa6.81□□□□□ -1.32
FOB1YDR110W VPS27P40343 622 aaKnown RBP6.81□□□□□ -1.32
FOB1YDR110W TFG1P41895 735 aaPredicted RBP6.81□□□□□ -1.32
FOB1YDR110W ALG12P53730 551 aa6.81□□□□□ -1.32
FOB1YDR110W MEH1Q02205 184 aa6.81□□□□□ -1.32
FOB1YDR110W YML083CQ04526 418 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms