RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeastyeast

Gene ATG31, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG31YDR022C PRE3P38624 215 aa8.06□□□□□ -1.12
ATG31YDR022C ABP1P15891 592 aaKnown RBP8.03□□□□□ -1.12
ATG31YDR022C HTA1P04911 132 aaKnown RBP8.02□□□□□ -1.13
ATG31YDR022C HTA2P04912 132 aa8.02□□□□□ -1.13
ATG31YDR022C YEL023CP39992 682 aa8.02□□□□□ -1.13
ATG31YDR022C PTC4P38089 393 aa7.99□□□□□ -1.13
ATG31YDR022C VRP1P37370 817 aa7.97□□□□□ -1.13
ATG31YDR022C PML39Q03760 334 aa7.92□□□□□ -1.14
ATG31YDR022C XDJ1P39102 459 aa7.9□□□□□ -1.14
ATG31YDR022C ELP4Q02884 456 aaKnown RBP7.88□□□□□ -1.15
ATG31YDR022C MAK11P20484 414 aaKnown RBP7.84□□□□□ -1.15
ATG31YDR022C GRE2Q12068 342 aaKnown RBP7.84□□□□□ -1.15
ATG31YDR022C DPS1P04802 557 aaKnown RBP7.82□□□□□ -1.16
ATG31YDR022C MIF2P35201 549 aa7.82□□□□□ -1.16
ATG31YDR022C MID1P41821 548 aa7.82□□□□□ -1.16
ATG31YDR022C ATH1P48016 1211 aa7.78□□□□□ -1.16
ATG31YDR022C RAM2P29703 316 aa7.77□□□□□ -1.17
ATG31YDR022C GUT1P32190 709 aa7.75□□□□□ -1.17
ATG31YDR022C PTC3P34221 468 aaKnown RBP7.74□□□□□ -1.17
ATG31YDR022C EDS1P38073 919 aa7.73□□□□□ -1.17
ATG31YDR022C ARH1P48360 493 aa7.73□□□□□ -1.17
ATG31YDR022C NST1P53935 1240 aa7.71□□□□□ -1.18
ATG31YDR022C COQ8P27697 501 aa7.7□□□□□ -1.18
ATG31YDR022C SRC1Q03707 834 aa7.7□□□□□ -1.18
ATG31YDR022C SOL3P38858 249 aa7.68□□□□□ -1.18
ATG31YDR022C PEX29Q03370 554 aa7.65□□□□□ -1.18
ATG31YDR022C RGA2Q06407 1009 aa7.64□□□□□ -1.19
ATG31YDR022C NOP53Q12080 455 aaKnown RBP7.64□□□□□ -1.19
ATG31YDR022C SPT23P35210 1082 aa7.63□□□□□ -1.19
ATG31YDR022C ILV3P39522 585 aaKnown RBP7.63□□□□□ -1.19
ATG31YDR022C AI4P03878 556 aa7.6□□□□□ -1.19
ATG31YDR022C HAP5Q02516 242 aa7.59□□□□□ -1.19
ATG31YDR022C MPH3P0CE00 602 aa7.58□□□□□ -1.2
ATG31YDR022C MPC54Q08550 464 aa7.53□□□□□ -1.2
ATG31YDR022C RAS1P01119 309 aa7.52□□□□□ -1.21
ATG31YDR022C PTC2P39966 464 aaKnown RBP7.52□□□□□ -1.21
ATG31YDR022C BNI4P53858 892 aa7.52□□□□□ -1.21
ATG31YDR022C RGA1P39083 1007 aa7.51□□□□□ -1.21
ATG31YDR022C YGR273CP53329 174 aa7.51□□□□□ -1.21
ATG31YDR022C YML082WQ04533 649 aaKnown RBP7.5□□□□□ -1.21
ATG31YDR022C NMA111P53920 997 aa7.47□□□□□ -1.21
ATG31YDR022C YPR015CQ12531 247 aa7.45□□□□□ -1.22
ATG31YDR022C SLI15P38283 698 aa7.42□□□□□ -1.22
ATG31YDR022C SET1P38827 1080 aaKnown RBP7.4□□□□□ -1.22
ATG31YDR022C DPL1Q05567 589 aa7.38□□□□□ -1.23
ATG31YDR022C KEX1P09620 729 aa7.35□□□□□ -1.23
ATG31YDR022C RAM1P22007 431 aa7.35□□□□□ -1.23
ATG31YDR022C IFH1P39520 1085 aa7.31□□□□□ -1.24
ATG31YDR022C ISU2Q12056 156 aa7.31□□□□□ -1.24
ATG31YDR022C RPP1BP10622 106 aaKnown RBP7.3□□□□□ -1.24
ATG31YDR022C CDC73Q06697 393 aa7.29□□□□□ -1.24
ATG31YDR022C GYP1Q08484 637 aa7.29□□□□□ -1.24
ATG31YDR022C PDR1P12383 1068 aa7.28□□□□□ -1.24
ATG31YDR022C SDH2P21801 266 aa7.28□□□□□ -1.24
ATG31YDR022C TRK1P12685 1235 aa7.27□□□□□ -1.25
ATG31YDR022C VHR2P40041 505 aa7.27□□□□□ -1.25
ATG31YDR022C YLR326WQ06170 240 aaKnown RBP7.27□□□□□ -1.25
ATG31YDR022C AMS1P22855 1083 aa7.26□□□□□ -1.25
ATG31YDR022C RAD54P32863 898 aa7.26□□□□□ -1.25
ATG31YDR022C UBP14P38237 781 aaKnown RBP7.25□□□□□ -1.25
ATG31YDR022C PCS60P38137 543 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
ATG31YDR022C KIC1P38692 1080 aa7.21□□□□□ -1.26
ATG31YDR022C SAS4Q04003 481 aa7.16□□□□□ -1.26
ATG31YDR022C PEX21P50091 288 aa7.15□□□□□ -1.26
ATG31YDR022C REF2P42073 533 aaPredicted RBP7.14□□□□□ -1.27
ATG31YDR022C YPR148CQ06523 435 aa7.14□□□□□ -1.27
ATG31YDR022C YDR090CQ03193 310 aa7.12□□□□□ -1.27
ATG31YDR022C CSC1Q06538 782 aa7.1□□□□□ -1.27
ATG31YDR022C TFB4Q12004 338 aa7.1□□□□□ -1.27
ATG31YDR022C YPL062WQ02781 134 aa7.09□□□□□ -1.27
ATG31YDR022C YEL077CQ3E7X8 1277 aa7.09□□□□□ -1.27
ATG31YDR022C MAK21Q12176 1025 aaKnown RBP7.08□□□□□ -1.28
ATG31YDR022C MRF1P30775 413 aaPredicted RBP7.07□□□□□ -1.28
ATG31YDR022C BUD20Q08004 166 aaPredicted RBP7.07□□□□□ -1.28
ATG31YDR022C YRR1Q12172 810 aa7.07□□□□□ -1.28
ATG31YDR022C AIR1P40507 360 aaKnown RBP7.06□□□□□ -1.28
ATG31YDR022C VPS70P47161 811 aa7.05□□□□□ -1.28
ATG31YDR022C CLA4P48562 842 aa7.05□□□□□ -1.28
ATG31YDR022C GAP1P19145 602 aaPredicted RBP7.04□□□□□ -1.28
ATG31YDR022C PRT1P06103 763 aaKnown RBP7.03□□□□□ -1.28
ATG31YDR022C TUM1Q08686 304 aaKnown RBP7.03□□□□□ -1.28
ATG31YDR022C GAR1P28007 205 aaKnown RBP7.02□□□□□ -1.29
ATG31YDR022C NPL4P33755 580 aa7.02□□□□□ -1.29
ATG31YDR022C ORC6P38826 435 aa7.01□□□□□ -1.29
ATG31YDR022C COX6P00427 148 aa7□□□□□ -1.29
ATG31YDR022C NUD1P32336 851 aa7□□□□□ -1.29
ATG31YDR022C STR2P47164 639 aa7□□□□□ -1.29
ATG31YDR022C CST6P40535 587 aa6.99□□□□□ -1.29
ATG31YDR022C ISM1P48526 1002 aa6.99□□□□□ -1.29
ATG31YDR022C ERG12P07277 443 aa6.98□□□□□ -1.29
ATG31YDR022C BRE2P43132 505 aa6.97□□□□□ -1.29
ATG31YDR022C MVP1P40959 511 aaKnown RBP6.94□□□□□ -1.3
ATG31YDR022C SPT16P32558 1035 aaKnown RBP6.93□□□□□ -1.3
ATG31YDR022C CKB1P43639 278 aa6.93□□□□□ -1.3
ATG31YDR022C GBP2P25555 427 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
ATG31YDR022C GCD11P32481 527 aaKnown RBP6.92□□□□□ -1.3
ATG31YDR022C PAT1P25644 796 aaKnown RBP6.9□□□□□ -1.3
ATG31YDR022C RGR1P19263 1082 aa6.89□□□□□ -1.31
ATG31YDR022C YPR109WQ06104 294 aa6.89□□□□□ -1.31
ATG31YDR022C FRK1Q03002 865 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms