RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH5	YDL154W	EDS1	P38073	919 aa		3.25	□□□□□ -1.89
MSH5	YDL154W	REF2	P42073	533 aa	Predicted RBP	3.25	□□□□□ -1.89
MSH5	YDL154W	ATH1	P48016	1211 aa		3.24	□□□□□ -1.89
MSH5	YDL154W	PTC3	P34221	468 aa	Known RBP	3.24	□□□□□ -1.89
MSH5	YDL154W	MAM3	Q12296	706 aa		3.24	□□□□□ -1.89
MSH5	YDL154W	YOR093C	Q12275	1648 aa		3.23	□□□□□ -1.89
MSH5	YDL154W	ABP1	P15891	592 aa	Known RBP	3.23	□□□□□ -1.89
MSH5	YDL154W	GRE2	Q12068	342 aa	Known RBP	3.23	□□□□□ -1.89
MSH5	YDL154W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
MSH5	YDL154W	VMA1	P17255	1071 aa	Known RBP	3.22	□□□□□ -1.89
MSH5	YDL154W	DSF2	P38213	736 aa		3.22	□□□□□ -1.89
MSH5	YDL154W	KIC1	P38692	1080 aa		3.22	□□□□□ -1.89
MSH5	YDL154W	IES2	P40154	320 aa		3.22	□□□□□ -1.89
MSH5	YDL154W	YBL029C-A	Q3E756	94 aa		3.22	□□□□□ -1.89
MSH5	YDL154W	MAK21	Q12176	1025 aa	Known RBP	3.21	□□□□□ -1.9
MSH5	YDL154W	GYP5	Q12344	894 aa		3.21	□□□□□ -1.9
MSH5	YDL154W	VHR2	P40041	505 aa		3.2	□□□□□ -1.9
MSH5	YDL154W	TFG1	P41895	735 aa	Predicted RBP	3.2	□□□□□ -1.9
MSH5	YDL154W	ATF2	P53296	535 aa		3.2	□□□□□ -1.9
MSH5	YDL154W	YNR021W	P53723	404 aa	Known RBP	3.2	□□□□□ -1.9
MSH5	YDL154W	DMA2	P53924	522 aa		3.2	□□□□□ -1.9
MSH5	YDL154W	BMT6	Q12291	365 aa		3.2	□□□□□ -1.9
MSH5	YDL154W	GUT1	P32190	709 aa		3.19	□□□□□ -1.9
MSH5	YDL154W	GLC3	P32775	704 aa		3.19	□□□□□ -1.9
MSH5	YDL154W	HGH1	P48362	394 aa	Known RBP	3.19	□□□□□ -1.9
MSH5	YDL154W	TY1B-DR4	Q07793	1604 aa		3.18	□□□□□ -1.9
MSH5	YDL154W	DCW1	P36091	449 aa		3.18	□□□□□ -1.9
MSH5	YDL154W	RRD1	P40454	393 aa	Known RBP	3.18	□□□□□ -1.9
MSH5	YDL154W	KIN1	P13185	1064 aa		3.18	□□□□□ -1.9
MSH5	YDL154W	PEP1	P32319	1579 aa		3.17	□□□□□ -1.9
MSH5	YDL154W	SIN3	P22579	1536 aa		3.17	□□□□□ -1.9
MSH5	YDL154W	RAD54	P32863	898 aa		3.17	□□□□□ -1.9
MSH5	YDL154W	SET4	P42948	560 aa		3.17	□□□□□ -1.9
MSH5	YDL154W	ESC1	Q03661	1658 aa	Known RBP	3.16	□□□□□ -1.9
MSH5	YDL154W	COX6	P00427	148 aa		3.16	□□□□□ -1.9
MSH5	YDL154W	SAM3	Q08986	587 aa		3.16	□□□□□ -1.9
MSH5	YDL154W	RPA190	P10964	1664 aa	Known RBP	3.16	□□□□□ -1.9
MSH5	YDL154W	DIT2	P21595	489 aa		3.15	□□□□□ -1.9
MSH5	YDL154W	YOL036W	Q08206	761 aa		3.15	□□□□□ -1.9
MSH5	YDL154W	MET5	P47169	1442 aa		3.15	□□□□□ -1.91
MSH5	YDL154W	HTA1	P04911	132 aa	Known RBP	3.14	□□□□□ -1.91
MSH5	YDL154W	HTA2	P04912	132 aa		3.14	□□□□□ -1.91
MSH5	YDL154W	TIF11	P38912	153 aa	Known RBP	3.14	□□□□□ -1.91
MSH5	YDL154W	YGR273C	P53329	174 aa		3.14	□□□□□ -1.91
MSH5	YDL154W	AIM7	Q12156	149 aa		3.14	□□□□□ -1.91
MSH5	YDL154W	VNX1	P42839	908 aa		3.13	□□□□□ -1.91
MSH5	YDL154W	RPP1B	P10622	106 aa	Known RBP	3.13	□□□□□ -1.91
MSH5	YDL154W	YLR326W	Q06170	240 aa	Known RBP	3.13	□□□□□ -1.91
MSH5	YDL154W	THO2	P53552	1597 aa	Known RBP	3.13	□□□□□ -1.91
MSH5	YDL154W	UBP14	P38237	781 aa	Known RBP	3.13	□□□□□ -1.91
MSH5	YDL154W	NUP42	P49686	430 aa	Known RBP	3.13	□□□□□ -1.91
MSH5	YDL154W	MST1	P07236	462 aa		3.12	□□□□□ -1.91
MSH5	YDL154W	KEX1	P09620	729 aa		3.12	□□□□□ -1.91
MSH5	YDL154W	MSB4	Q12317	492 aa		3.12	□□□□□ -1.91
MSH5	YDL154W	CDC25	P04821	1589 aa		3.11	□□□□□ -1.91
MSH5	YDL154W	EAP1	P36041	632 aa	Known RBP	3.11	□□□□□ -1.91
MSH5	YDL154W	ULI1	P43604	169 aa		3.11	□□□□□ -1.91
MSH5	YDL154W	YDR090C	Q03193	310 aa		3.1	□□□□□ -1.91
MSH5	YDL154W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	RIP-Chip
MSH5	YDL154W	PSE1	P32337	1089 aa	Known RBP	3.09	□□□□□ -1.92
MSH5	YDL154W	PEX21	P50091	288 aa		3.09	□□□□□ -1.92
MSH5	YDL154W	RLF2	Q12495	606 aa		3.09	□□□□□ -1.92
MSH5	YDL154W	PDR15	Q04182	1529 aa	Known RBP	3.09	□□□□□ -1.92
MSH5	YDL154W	BRL1	P38770	471 aa		3.08	□□□□□ -1.92
MSH5	YDL154W	SOL3	P38858	249 aa		3.08	□□□□□ -1.92
MSH5	YDL154W	YEL023C	P39992	682 aa		3.08	□□□□□ -1.92
MSH5	YDL154W	GUA1	P38625	525 aa	Known RBP	3.08	□□□□□ -1.92
MSH5	YDL154W	TEA1	P47988	759 aa		3.08	□□□□□ -1.92
MSH5	YDL154W	YMR196W	Q04336	1088 aa		3.08	□□□□□ -1.92
MSH5	YDL154W	MPH3	P0CE00	602 aa		3.07	□□□□□ -1.92
MSH5	YDL154W	SSA2	P10592	639 aa	Known RBP	3.07	□□□□□ -1.92
MSH5	YDL154W	PEX29	Q03370	554 aa		3.07	□□□□□ -1.92
MSH5	YDL154W	NTE1	Q04958	1679 aa		3.07	□□□□□ -1.92
MSH5	YDL154W	RPO31	P04051	1460 aa		3.07	□□□□□ -1.92
MSH5	YDL154W	AI4	P03878	556 aa		3.07	□□□□□ -1.92
MSH5	YDL154W	SSK2	P53599	1579 aa		3.07	□□□□□ -1.92
MSH5	YDL154W	TRP5	P00931	707 aa	Known RBP	3.06	□□□□□ -1.92
MSH5	YDL154W	CLB5	P30283	435 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	CSN12	P47130	423 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	LDB19	Q12502	818 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	DNF2	Q12675	1612 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	MMS1	Q06211	1407 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	FKH1	P40466	484 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	DAN4	P47179	1161 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	JIP4	Q03361	876 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	GEA2	P39993	1459 aa	Known RBP	3.06	□□□□□ -1.92
MSH5	YDL154W	BPT1	P14772	1559 aa		3.06	□□□□□ -1.92
MSH5	YDL154W	ILV3	P39522	585 aa	Known RBP	3.06	□□□□□ -1.92
MSH5	YDL154W	PTC4	P38089	393 aa		3.05	□□□□□ -1.92
MSH5	YDL154W	ORC6	P38826	435 aa		3.05	□□□□□ -1.92
MSH5	YDL154W	HPC2	Q01448	625 aa		3.05	□□□□□ -1.92
MSH5	YDL154W	CSC1	Q06538	782 aa		3.05	□□□□□ -1.92
MSH5	YDL154W	TCB3	Q03640	1545 aa	Known RBP	3.05	□□□□□ -1.92
MSH5	YDL154W	HIR3	P47171	1648 aa		3.05	□□□□□ -1.92
MSH5	YDL154W	RPL34B	P40525	121 aa	Known RBP	3.05	□□□□□ -1.92
MSH5	YDL154W	TFB3	Q03290	321 aa		3.05	□□□□□ -1.92
MSH5	YDL154W	SLI15	P38283	698 aa		3.04	□□□□□ -1.92
MSH5	YDL154W	YPR109W	Q06104	294 aa		3.04	□□□□□ -1.92
MSH5	YDL154W	AIR2	Q12476	344 aa	Known RBP	3.04	□□□□□ -1.92
MSH5	YDL154W	HSL1	P34244	1518 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms