RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W TY1B-LR1Q12088 1755 aaKnown RBP11.13□□□□□ -0.63
NDE2YDL085W TY1B-NL1Q12112 1755 aa11.13□□□□□ -0.63
NDE2YDL085W TY1B-GR1Q12141 1755 aa11.13□□□□□ -0.63
NDE2YDL085W TY1B-BLQ12490 1755 aa11.13□□□□□ -0.63
NDE2YDL085W ESC1Q03661 1658 aaKnown RBP11.12□□□□□ -0.63
NDE2YDL085W GEA2P39993 1459 aaKnown RBP11.1□□□□□ -0.63
NDE2YDL085W SSM4P40318 1319 aa11.08□□□□□ -0.64
NDE2YDL085W CAT8P39113 1433 aa11.08□□□□□ -0.64
NDE2YDL085W MTC1P47018 478 aaKnown RBP11.06□□□□□ -0.64
NDE2YDL085W RPA190P10964 1664 aaKnown RBP11.06□□□□□ -0.64
NDE2YDL085W NTE1Q04958 1679 aa11.05□□□□□ -0.64
NDE2YDL085W RPO21P04050 1733 aaKnown RBP11.03□□□□□ -0.64
NDE2YDL085W TY3B-GQ99315 1547 aa11.03□□□□□ -0.64
NDE2YDL085W IRC20Q06554 1556 aa11.01□□□□□ -0.65
NDE2YDL085W DNF1P32660 1571 aa11.01□□□□□ -0.65
NDE2YDL085W VPS15P22219 1454 aa11□□□□□ -0.65
NDE2YDL085W YBT1P32386 1661 aa10.98□□□□□ -0.65
NDE2YDL085W NUP159P40477 1460 aa10.97□□□□□ -0.65
NDE2YDL085W MET10P39692 1035 aa10.95□□□□□ -0.66
NDE2YDL085W SRB8P25648 1427 aa10.92□□□□□ -0.66
NDE2YDL085W PDR12Q02785 1511 aa10.91□□□□□ -0.66
NDE2YDL085W MET5P47169 1442 aa10.9□□□□□ -0.66
NDE2YDL085W PDR10P51533 1564 aa10.87□□□□□ -0.67
NDE2YDL085W CKB1P43639 278 aa10.85□□□□□ -0.67
NDE2YDL085W GDB1Q06625 1536 aa10.84□□□□□ -0.67
NDE2YDL085W ARO1P08566 1588 aaKnown RBP10.84□□□□□ -0.67
NDE2YDL085W NUP157P40064 1391 aaKnown RBP10.83□□□□□ -0.68
NDE2YDL085W MMS1Q06211 1407 aa10.83□□□□□ -0.68
NDE2YDL085W SPO14P36126 1683 aa10.81□□□□□ -0.68
NDE2YDL085W NSR1P27476 414 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
NDE2YDL085W POL5P39985 1022 aaKnown RBP10.8□□□□□ -0.68
NDE2YDL085W BUD21Q08492 214 aaPredicted RBP10.8□□□□□ -0.68
NDE2YDL085W GCN2P15442 1659 aa10.8□□□□□ -0.68
NDE2YDL085W YRF1-1P0CX20 1796 aa10.79□□□□□ -0.68
NDE2YDL085W YRF1-5P0CX21 1796 aa10.79□□□□□ -0.68
NDE2YDL085W YRF1-8P0CX22 1796 aa10.79□□□□□ -0.68
NDE2YDL085W BUD3P25558 1636 aa10.77□□□□□ -0.69
NDE2YDL085W NOP2P40991 618 aaKnown RBP10.75□□□□□ -0.69
NDE2YDL085W BFR2Q06631 534 aaKnown RBP10.75□□□□□ -0.69
NDE2YDL085W IQG1Q12280 1495 aa10.74□□□□□ -0.69
NDE2YDL085W YSP2Q06681 1438 aa10.72□□□□□ -0.69
NDE2YDL085W NOP7P53261 605 aaKnown RBP10.72□□□□□ -0.69
NDE2YDL085W PAF1P38351 445 aa10.69□□□□□ -0.7
NDE2YDL085W BNR1P40450 1375 aa10.65□□□□□ -0.7
NDE2YDL085W ENP1P38333 483 aaKnown RBP10.65□□□□□ -0.7
NDE2YDL085W SEC3P33332 1336 aaKnown RBP10.65□□□□□ -0.71
NDE2YDL085W PDR5P33302 1511 aaKnown RBP10.63□□□□□ -0.71
NDE2YDL085W SEC7P11075 2009 aaKnown RBP10.62□□□□□ -0.71
NDE2YDL085W LTE1P07866 1435 aa10.61□□□□□ -0.71
NDE2YDL085W TRM3Q07527 1436 aa10.58□□□□□ -0.72
NDE2YDL085W YOR093CQ12275 1648 aa10.56□□□□□ -0.72
NDE2YDL085W SCT1P32784 759 aa10.53□□□□□ -0.72
NDE2YDL085W CHC1P22137 1653 aaKnown RBP10.53□□□□□ -0.72
NDE2YDL085W DOP1Q03921 1698 aa10.52□□□□□ -0.72
NDE2YDL085W DRS2P39524 1355 aa10.51□□□□□ -0.73
NDE2YDL085W SPT7P35177 1332 aa10.5□□□□□ -0.73
NDE2YDL085W RAV1P47104 1357 aa10.5□□□□□ -0.73
NDE2YDL085W RTC1Q08281 1341 aa10.48□□□□□ -0.73
NDE2YDL085W MHP1P43638 1398 aa10.47□□□□□ -0.73
NDE2YDL085W URN1Q06525 465 aaKnown RBP10.45□□□□□ -0.74
NDE2YDL085W ESL2P36168 1195 aa10.44□□□□□ -0.74
NDE2YDL085W NUP188P52593 1655 aaKnown RBP10.43□□□□□ -0.74
NDE2YDL085W TY3B-IQ7LHG5 1498 aaKnown RBP10.43□□□□□ -0.74
NDE2YDL085W IML1P47170 1584 aa10.4□□□□□ -0.74
NDE2YDL085W VMR1P38735 1592 aa10.38□□□□□ -0.75
NDE2YDL085W DNF2Q12675 1612 aa10.38□□□□□ -0.75
NDE2YDL085W PDR11P40550 1411 aa10.36□□□□□ -0.75
NDE2YDL085W TAF5P38129 798 aa10.36□□□□□ -0.75
NDE2YDL085W ORC1P54784 914 aaPredicted RBP10.36□□□□□ -0.75
NDE2YDL085W IPL1P38991 367 aa10.32□□□□□ -0.76
NDE2YDL085W ITT1Q04638 464 aa10.32□□□□□ -0.76
NDE2YDL085W KIP3P53086 805 aaKnown RBP10.31□□□□□ -0.76
NDE2YDL085W PDS5Q04264 1277 aa10.31□□□□□ -0.76
NDE2YDL085W YLR419WQ06698 1435 aaKnown RBP10.3□□□□□ -0.76
NDE2YDL085W PRS1P32895 427 aaKnown RBP10.29□□□□□ -0.76
NDE2YDL085W PSD2P53037 1138 aaKnown RBP10.28□□□□□ -0.76
NDE2YDL085W NAP1P25293 417 aaKnown RBP10.27□□□□□ -0.77
NDE2YDL085W BNI1P41832 1953 aa10.27□□□□□ -0.77
NDE2YDL085W LEU3P08638 886 aa10.25□□□□□ -0.77
NDE2YDL085W NUP192P47054 1683 aa10.24□□□□□ -0.77
NDE2YDL085W SPE2P21182 396 aa10.24□□□□□ -0.77
NDE2YDL085W YAP3P38749 330 aa10.24□□□□□ -0.77
NDE2YDL085W HAP1P0CE41 1502 aa10.23□□□□□ -0.77
NDE2YDL085W TYS1P36421 394 aaKnown RBP10.23□□□□□ -0.77
NDE2YDL085W ALD4P46367 519 aaKnown RBP10.22□□□□□ -0.77
NDE2YDL085W TAF8Q03750 510 aa10.18□□□□□ -0.78
NDE2YDL085W BCK1Q01389 1478 aa10.17□□□□□ -0.78
NDE2YDL085W RAD9P14737 1309 aa10.14□□□□□ -0.79
NDE2YDL085W CHZ1P40019 153 aaPredicted RBP10.14□□□□□ -0.79
NDE2YDL085W MLP1Q02455 1875 aaKnown RBP10.13□□□□□ -0.79
NDE2YDL085W TFA1P36100 482 aa10.13□□□□□ -0.79
NDE2YDL085W IOC4Q04213 475 aa10.13□□□□□ -0.79
NDE2YDL085W RPP0P05317 312 aaKnown RBP10.11□□□□□ -0.79
NDE2YDL085W FKH1P40466 484 aa10.11□□□□□ -0.79
NDE2YDL085W MRX12P47084 519 aa10.11□□□□□ -0.79
NDE2YDL085W CAB1Q04430 367 aa10.1□□□□□ -0.79
NDE2YDL085W RTG3P38165 486 aa10.08□□□□□ -0.8
NDE2YDL085W CFT1Q06632 1357 aaKnown RBP10.05□□□□□ -0.8
NDE2YDL085W CDC45Q08032 650 aa10.05□□□□□ -0.8
NDE2YDL085W VPS27P40343 622 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms