RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W PTC4P38089 393 aa10.95□□□□□ -0.66
HMRA1YCR097W YEL023CP39992 682 aa10.93□□□□□ -0.66
HMRA1YCR097W CHL1P22516 861 aaPredicted RBP10.89□□□□□ -0.67
HMRA1YCR097W BCK2P33306 851 aa10.84□□□□□ -0.67
HMRA1YCR097W PRE3P38624 215 aa10.84□□□□□ -0.67
HMRA1YCR097W GRE2Q12068 342 aaKnown RBP10.83□□□□□ -0.68
HMRA1YCR097W MAK11P20484 414 aaKnown RBP10.78□□□□□ -0.68
HMRA1YCR097W MIF2P35201 549 aa10.78□□□□□ -0.68
HMRA1YCR097W RAM2P29703 316 aa10.75□□□□□ -0.69
HMRA1YCR097W PTC3P34221 468 aaKnown RBP10.73□□□□□ -0.69
HMRA1YCR097W ATH1P48016 1211 aa10.73□□□□□ -0.69
HMRA1YCR097W PML39Q03760 334 aa10.73□□□□□ -0.69
HMRA1YCR097W GUT1P32190 709 aa10.72□□□□□ -0.69
HMRA1YCR097W EDS1P38073 919 aa10.72□□□□□ -0.69
HMRA1YCR097W YDR344CQ05510 147 aa10.67□□□□□ -0.7
HMRA1YCR097W ELP4Q02884 456 aaKnown RBP10.64□□□□□ -0.71
HMRA1YCR097W NST1P53935 1240 aa10.63□□□□□ -0.71
HMRA1YCR097W COQ8P27697 501 aa10.62□□□□□ -0.71
HMRA1YCR097W VRP1P37370 817 aa10.62□□□□□ -0.71
HMRA1YCR097W XDJ1P39102 459 aa10.59□□□□□ -0.71
HMRA1YCR097W SOL3P38858 249 aa10.58□□□□□ -0.72
HMRA1YCR097W MID1P41821 548 aa10.57□□□□□ -0.72
HMRA1YCR097W ARH1P48360 493 aa10.57□□□□□ -0.72
HMRA1YCR097W MPH3P0CE00 602 aa10.53□□□□□ -0.72
HMRA1YCR097W AI4P03878 556 aa10.52□□□□□ -0.73
HMRA1YCR097W PEX29Q03370 554 aa10.47□□□□□ -0.73
HMRA1YCR097W NOP53Q12080 455 aaKnown RBP10.46□□□□□ -0.73
HMRA1YCR097W SPT23P35210 1082 aa10.45□□□□□ -0.74
HMRA1YCR097W ILV3P39522 585 aaKnown RBP10.44□□□□□ -0.74
HMRA1YCR097W YGR273CP53329 174 aa10.41□□□□□ -0.74
HMRA1YCR097W HAP5Q02516 242 aa10.4□□□□□ -0.74
HMRA1YCR097W DPS1P04802 557 aaKnown RBP10.37□□□□□ -0.75
HMRA1YCR097W BNI4P53858 892 aa10.34□□□□□ -0.75
HMRA1YCR097W MPC54Q08550 464 aa10.33□□□□□ -0.76
HMRA1YCR097W YML082WQ04533 649 aaKnown RBP10.31□□□□□ -0.76
HMRA1YCR097W PTC2P39966 464 aaKnown RBP10.29□□□□□ -0.76
HMRA1YCR097W SLI15P38283 698 aa10.28□□□□□ -0.76
HMRA1YCR097W NMA111P53920 997 aa10.27□□□□□ -0.77
HMRA1YCR097W DPL1Q05567 589 aa10.23□□□□□ -0.77
HMRA1YCR097W KEX1P09620 729 aa10.16□□□□□ -0.78
HMRA1YCR097W ISU2Q12056 156 aa10.12□□□□□ -0.79
HMRA1YCR097W SRC1Q03707 834 aa10.11□□□□□ -0.79
HMRA1YCR097W SET1P38827 1080 aaKnown RBP10.1□□□□□ -0.79
HMRA1YCR097W YPR015CQ12531 247 aa10.09□□□□□ -0.79
HMRA1YCR097W RAM1P22007 431 aa10.07□□□□□ -0.8
HMRA1YCR097W CDC73Q06697 393 aa10.07□□□□□ -0.8
HMRA1YCR097W UBP14P38237 781 aaKnown RBP10.06□□□□□ -0.8
HMRA1YCR097W YLR326WQ06170 240 aaKnown RBP10.05□□□□□ -0.8
HMRA1YCR097W VHR2P40041 505 aa10.02□□□□□ -0.81
HMRA1YCR097W RAS1P01119 309 aa10.01□□□□□ -0.81
HMRA1YCR097W PCS60P38137 543 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
HMRA1YCR097W GYP1Q08484 637 aa9.98□□□□□ -0.81
HMRA1YCR097W PDR1P12383 1068 aa9.96□□□□□ -0.82
HMRA1YCR097W RAD54P32863 898 aa9.95□□□□□ -0.82
HMRA1YCR097W RPP1BP10622 106 aaKnown RBP9.92□□□□□ -0.82
HMRA1YCR097W AMS1P22855 1083 aa9.9□□□□□ -0.82
HMRA1YCR097W SAS4Q04003 481 aa9.9□□□□□ -0.82
HMRA1YCR097W YDR090CQ03193 310 aa9.85□□□□□ -0.83
HMRA1YCR097W SDH2P21801 266 aa9.84□□□□□ -0.83
HMRA1YCR097W IFH1P39520 1085 aa9.83□□□□□ -0.84
HMRA1YCR097W TRK1P12685 1235 aa9.8□□□□□ -0.84
HMRA1YCR097W KIC1P38692 1080 aa9.8□□□□□ -0.84
HMRA1YCR097W YRR1Q12172 810 aa9.78□□□□□ -0.84
HMRA1YCR097W PEX21P50091 288 aa9.77□□□□□ -0.85
HMRA1YCR097W BUD20Q08004 166 aaPredicted RBP9.77□□□□□ -0.85
HMRA1YCR097W YEL077CQ3E7X8 1277 aa9.76□□□□□ -0.85
HMRA1YCR097W MRF1P30775 413 aaPredicted RBP9.75□□□□□ -0.85
HMRA1YCR097W RGA1P39083 1007 aa9.75□□□□□ -0.85
HMRA1YCR097W GAP1P19145 602 aaPredicted RBP9.74□□□□□ -0.85
HMRA1YCR097W RGA2Q06407 1009 aa9.74□□□□□ -0.85
HMRA1YCR097W PRT1P06103 763 aaKnown RBP9.73□□□□□ -0.85
HMRA1YCR097W REF2P42073 533 aaPredicted RBP9.73□□□□□ -0.85
HMRA1YCR097W CSC1Q06538 782 aa9.73□□□□□ -0.85
HMRA1YCR097W TFB4Q12004 338 aa9.72□□□□□ -0.85
HMRA1YCR097W STR2P47164 639 aa9.7□□□□□ -0.86
HMRA1YCR097W YPR148CQ06523 435 aa9.7□□□□□ -0.86
HMRA1YCR097W ISM1P48526 1002 aa9.69□□□□□ -0.86
HMRA1YCR097W TUM1Q08686 304 aaKnown RBP9.69□□□□□ -0.86
HMRA1YCR097W NUD1P32336 851 aa9.66□□□□□ -0.86
HMRA1YCR097W ERG12P07277 443 aa9.63□□□□□ -0.87
HMRA1YCR097W ORC6P38826 435 aa9.63□□□□□ -0.87
HMRA1YCR097W NPL4P33755 580 aa9.61□□□□□ -0.87
HMRA1YCR097W COX6P00427 148 aa9.58□□□□□ -0.88
HMRA1YCR097W VPS70P47161 811 aa9.58□□□□□ -0.88
HMRA1YCR097W GCD11P32481 527 aaKnown RBP9.57□□□□□ -0.88
HMRA1YCR097W MAK21Q12176 1025 aaKnown RBP9.56□□□□□ -0.88
HMRA1YCR097W MVP1P40959 511 aaKnown RBP9.55□□□□□ -0.88
HMRA1YCR097W TY1A-DR4O74302 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-HP0C2I4 478 aaKnown RBP9.54□□□□□ -0.88
HMRA1YCR097W TY1A-AP0CX57 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-PR1P0CX58 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-ORP0CX59 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-PR2P0CX60 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-DR5P0CX65 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-ER2P0CX66 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-GR3P0CX67 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-LR1P0CX68 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-MR2P0CX69 440 aa9.54□□□□□ -0.88
HMRA1YCR097W SEC2P17065 759 aa9.54□□□□□ -0.88
HMRA1YCR097W CST6P40535 587 aa9.54□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms