RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W PTC4P38089 393 aa8.15□□□□□ -1.1
CDC50YCR094W CHL1P22516 861 aaPredicted RBP8.14□□□□□ -1.11
CDC50YCR094W BCK2P33306 851 aa8.14□□□□□ -1.11
CDC50YCR094W YEL023CP39992 682 aa8.14□□□□□ -1.11
CDC50YCR094W PRE3P38624 215 aa8.11□□□□□ -1.11
CDC50YCR094W GRE2Q12068 342 aaKnown RBP8.04□□□□□ -1.12
CDC50YCR094W YDR344CQ05510 147 aa8.02□□□□□ -1.13
CDC50YCR094W PML39Q03760 334 aa8□□□□□ -1.13
CDC50YCR094W MIF2P35201 549 aa7.98□□□□□ -1.13
CDC50YCR094W MAK11P20484 414 aaKnown RBP7.97□□□□□ -1.13
CDC50YCR094W EDS1P38073 919 aa7.97□□□□□ -1.13
CDC50YCR094W RAM2P29703 316 aa7.96□□□□□ -1.14
CDC50YCR094W PTC3P34221 468 aaKnown RBP7.96□□□□□ -1.14
CDC50YCR094W ATH1P48016 1211 aa7.96□□□□□ -1.14
CDC50YCR094W GUT1P32190 709 aa7.95□□□□□ -1.14
CDC50YCR094W VRP1P37370 817 aa7.95□□□□□ -1.14
CDC50YCR094W XDJ1P39102 459 aa7.94□□□□□ -1.14
CDC50YCR094W ELP4Q02884 456 aaKnown RBP7.94□□□□□ -1.14
CDC50YCR094W NST1P53935 1240 aa7.92□□□□□ -1.14
CDC50YCR094W MID1P41821 548 aa7.89□□□□□ -1.15
CDC50YCR094W SOL3P38858 249 aa7.88□□□□□ -1.15
CDC50YCR094W ARH1P48360 493 aa7.88□□□□□ -1.15
CDC50YCR094W COQ8P27697 501 aa7.87□□□□□ -1.15
CDC50YCR094W MPH3P0CE00 602 aa7.82□□□□□ -1.16
CDC50YCR094W AI4P03878 556 aa7.81□□□□□ -1.16
CDC50YCR094W SPT23P35210 1082 aa7.79□□□□□ -1.16
CDC50YCR094W ILV3P39522 585 aaKnown RBP7.79□□□□□ -1.16
CDC50YCR094W PEX29Q03370 554 aa7.79□□□□□ -1.16
CDC50YCR094W DPS1P04802 557 aaKnown RBP7.78□□□□□ -1.16
CDC50YCR094W HAP5Q02516 242 aa7.75□□□□□ -1.17
CDC50YCR094W YGR273CP53329 174 aa7.71□□□□□ -1.18
CDC50YCR094W BNI4P53858 892 aa7.7□□□□□ -1.18
CDC50YCR094W MPC54Q08550 464 aa7.7□□□□□ -1.18
CDC50YCR094W NOP53Q12080 455 aaKnown RBP7.7□□□□□ -1.18
CDC50YCR094W YML082WQ04533 649 aaKnown RBP7.68□□□□□ -1.18
CDC50YCR094W PTC2P39966 464 aaKnown RBP7.66□□□□□ -1.18
CDC50YCR094W SLI15P38283 698 aa7.63□□□□□ -1.19
CDC50YCR094W NMA111P53920 997 aa7.63□□□□□ -1.19
CDC50YCR094W SRC1Q03707 834 aa7.63□□□□□ -1.19
CDC50YCR094W DPL1Q05567 589 aa7.59□□□□□ -1.19
CDC50YCR094W YPR015CQ12531 247 aa7.54□□□□□ -1.2
CDC50YCR094W KEX1P09620 729 aa7.53□□□□□ -1.2
CDC50YCR094W RAM1P22007 431 aa7.51□□□□□ -1.21
CDC50YCR094W ISU2Q12056 156 aa7.51□□□□□ -1.21
CDC50YCR094W RAS1P01119 309 aa7.5□□□□□ -1.21
CDC50YCR094W CDC73Q06697 393 aa7.48□□□□□ -1.21
CDC50YCR094W YLR326WQ06170 240 aaKnown RBP7.45□□□□□ -1.22
CDC50YCR094W UBP14P38237 781 aaKnown RBP7.44□□□□□ -1.22
CDC50YCR094W SET1P38827 1080 aaKnown RBP7.42□□□□□ -1.22
CDC50YCR094W GYP1Q08484 637 aa7.42□□□□□ -1.22
CDC50YCR094W PDR1P12383 1068 aa7.41□□□□□ -1.22
CDC50YCR094W RGA2Q06407 1009 aa7.41□□□□□ -1.22
CDC50YCR094W VHR2P40041 505 aa7.4□□□□□ -1.22
CDC50YCR094W AMS1P22855 1083 aa7.38□□□□□ -1.23
CDC50YCR094W PCS60P38137 543 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
CDC50YCR094W RGA1P39083 1007 aa7.38□□□□□ -1.23
CDC50YCR094W SDH2P21801 266 aa7.36□□□□□ -1.23
CDC50YCR094W RAD54P32863 898 aa7.36□□□□□ -1.23
CDC50YCR094W SAS4Q04003 481 aa7.34□□□□□ -1.23
CDC50YCR094W TRK1P12685 1235 aa7.33□□□□□ -1.24
CDC50YCR094W RPP1BP10622 106 aaKnown RBP7.3□□□□□ -1.24
CDC50YCR094W YDR090CQ03193 310 aa7.27□□□□□ -1.25
CDC50YCR094W YEL077CQ3E7X8 1277 aa7.27□□□□□ -1.25
CDC50YCR094W BUD20Q08004 166 aaPredicted RBP7.26□□□□□ -1.25
CDC50YCR094W YRR1Q12172 810 aa7.24□□□□□ -1.25
CDC50YCR094W MRF1P30775 413 aaPredicted RBP7.23□□□□□ -1.25
CDC50YCR094W PRT1P06103 763 aaKnown RBP7.22□□□□□ -1.25
CDC50YCR094W GAP1P19145 602 aaPredicted RBP7.22□□□□□ -1.25
CDC50YCR094W KIC1P38692 1080 aa7.21□□□□□ -1.26
CDC50YCR094W STR2P47164 639 aa7.21□□□□□ -1.26
CDC50YCR094W PEX21P50091 288 aa7.21□□□□□ -1.26
CDC50YCR094W ISM1P48526 1002 aa7.2□□□□□ -1.26
CDC50YCR094W IFH1P39520 1085 aa7.18□□□□□ -1.26
CDC50YCR094W CSC1Q06538 782 aa7.18□□□□□ -1.26
CDC50YCR094W TFB4Q12004 338 aa7.18□□□□□ -1.26
CDC50YCR094W NUD1P32336 851 aa7.16□□□□□ -1.26
CDC50YCR094W TUM1Q08686 304 aaKnown RBP7.16□□□□□ -1.26
CDC50YCR094W REF2P42073 533 aaPredicted RBP7.14□□□□□ -1.27
CDC50YCR094W ERG12P07277 443 aa7.13□□□□□ -1.27
CDC50YCR094W YPR148CQ06523 435 aa7.12□□□□□ -1.27
CDC50YCR094W ORC6P38826 435 aa7.11□□□□□ -1.27
CDC50YCR094W CST6P40535 587 aa7.11□□□□□ -1.27
CDC50YCR094W AIR1P40507 360 aaKnown RBP7.1□□□□□ -1.27
CDC50YCR094W CLA4P48562 842 aa7.1□□□□□ -1.27
CDC50YCR094W TY1A-DR4O74302 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-HP0C2I4 478 aaKnown RBP7.09□□□□□ -1.27
CDC50YCR094W TY1A-AP0CX57 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-PR1P0CX58 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-ORP0CX59 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-PR2P0CX60 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-DR5P0CX65 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-ER2P0CX66 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-GR3P0CX67 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-LR1P0CX68 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-MR2P0CX69 440 aa7.09□□□□□ -1.27
CDC50YCR094W SEC2P17065 759 aa7.09□□□□□ -1.27
CDC50YCR094W NPL4P33755 580 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-JR2P47099 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-DR1Q03856 440 aa7.09□□□□□ -1.27
CDC50YCR094W TY1A-ML1Q04706 440 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms