RNA–Protein interactions for RNA: YCR063W

BUD31, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene BUD31, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD31YCR063W YCK3P39962 524 aa11.65□□□□□ -0.54
BUD31YCR063W SNQ2P32568 1501 aaKnown RBP11.63□□□□□ -0.55
BUD31YCR063W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.59□□□□□ -0.55not detected
BUD31YCR063W YAH1Q12184 172 aaKnown RBP11.58□□□□□ -0.56
BUD31YCR063W PDR15Q04182 1529 aaKnown RBP11.55□□□□□ -0.56
BUD31YCR063W CDC25P04821 1589 aa11.55□□□□□ -0.56
BUD31YCR063W MRPL32P25348 183 aa11.55□□□□□ -0.56
BUD31YCR063W TAF7Q05021 590 aa11.54□□□□□ -0.56
BUD31YCR063W ULS1Q08562 1619 aa11.53□□□□□ -0.56
BUD31YCR063W TRM732Q03496 1420 aa11.53□□□□□ -0.56
BUD31YCR063W ESC1Q03661 1658 aaKnown RBP11.53□□□□□ -0.56
BUD31YCR063W YIL055CP40523 627 aaKnown RBP11.53□□□□□ -0.56
BUD31YCR063W STH1P32597 1359 aa11.53□□□□□ -0.56
BUD31YCR063W SPP41P38904 1435 aa11.52□□□□□ -0.56
BUD31YCR063W YKR023WP36119 530 aaKnown RBP11.5□□□□□ -0.57
BUD31YCR063W VTH1P40438 1549 aa11.5□□□□□ -0.57
BUD31YCR063W VTH2P40890 1549 aa11.5□□□□□ -0.57
BUD31YCR063W YLR271WQ06152 274 aa11.49□□□□□ -0.57
BUD31YCR063W TY1B-JR2P47100 1755 aaKnown RBP11.49□□□□□ -0.57
BUD31YCR063W TY1B-ER2Q03619 1755 aa11.49□□□□□ -0.57
BUD31YCR063W TY1B-MR1Q04214 1755 aa11.49□□□□□ -0.57
BUD31YCR063W TY1B-MR2Q04670 1755 aaKnown RBP11.49□□□□□ -0.57
BUD31YCR063W TY1B-LR1Q12088 1755 aaKnown RBP11.49□□□□□ -0.57
BUD31YCR063W TY1B-NL1Q12112 1755 aa11.49□□□□□ -0.57
BUD31YCR063W TY1B-GR1Q12141 1755 aa11.49□□□□□ -0.57
BUD31YCR063W TY1B-BLQ12490 1755 aa11.49□□□□□ -0.57
BUD31YCR063W NTE1Q04958 1679 aa11.43□□□□□ -0.58
BUD31YCR063W PAN1P32521 1480 aa11.42□□□□□ -0.58
BUD31YCR063W TSC11P40061 1430 aa11.42□□□□□ -0.58
BUD31YCR063W LEO1P38439 464 aa11.41□□□□□ -0.58
BUD31YCR063W NUP170P38181 1502 aa11.4□□□□□ -0.58
BUD31YCR063W IKI3Q06706 1349 aaKnown RBP11.4□□□□□ -0.58
BUD31YCR063W GEA1P47102 1408 aaPredicted RBP11.39□□□□□ -0.59
BUD31YCR063W RPA190P10964 1664 aaKnown RBP11.38□□□□□ -0.59
BUD31YCR063W RPO21P04050 1733 aaKnown RBP11.38□□□□□ -0.59
BUD31YCR063W RSM7P47150 247 aa11.36□□□□□ -0.59
BUD31YCR063W IFH1P39520 1085 aa11.35□□□□□ -0.59
BUD31YCR063W MGA2P40578 1113 aa11.35□□□□□ -0.59
BUD31YCR063W YBT1P32386 1661 aa11.35□□□□□ -0.59
BUD31YCR063W TY3B-GQ99315 1547 aa11.32□□□□□ -0.6
BUD31YCR063W SNT2P53127 1403 aa11.29□□□□□ -0.6
BUD31YCR063W TFC8Q12308 588 aa11.28□□□□□ -0.6
BUD31YCR063W DNF1P32660 1571 aa11.28□□□□□ -0.6
BUD31YCR063W GEA2P39993 1459 aaKnown RBP11.26□□□□□ -0.61
BUD31YCR063W IRC20Q06554 1556 aa11.26□□□□□ -0.61
BUD31YCR063W HOP09932 586 aa11.24□□□□□ -0.61
BUD31YCR063W SSM4P40318 1319 aa11.23□□□□□ -0.61
BUD31YCR063W RTT106P40161 455 aa11.17□□□□□ -0.62
BUD31YCR063W LEU3P08638 886 aa11.16□□□□□ -0.62
BUD31YCR063W CST9Q06032 482 aa11.16□□□□□ -0.62
BUD31YCR063W NUP159P40477 1460 aa11.16□□□□□ -0.62
BUD31YCR063W CAT8P39113 1433 aa11.16□□□□□ -0.62
BUD31YCR063W VPS15P22219 1454 aa11.15□□□□□ -0.62
BUD31YCR063W YRF1-1P0CX20 1796 aa11.13□□□□□ -0.63
BUD31YCR063W YRF1-5P0CX21 1796 aa11.13□□□□□ -0.63
BUD31YCR063W YRF1-8P0CX22 1796 aa11.13□□□□□ -0.63
BUD31YCR063W SPO14P36126 1683 aa11.12□□□□□ -0.63
BUD31YCR063W DCD1P06773 312 aa11.12□□□□□ -0.63
BUD31YCR063W PSD2P53037 1138 aaKnown RBP11.12□□□□□ -0.63
BUD31YCR063W ARO1P08566 1588 aaKnown RBP11.11□□□□□ -0.63
BUD31YCR063W AI2P03876 854 aa11.09□□□□□ -0.63
BUD31YCR063W GDB1Q06625 1536 aa11.09□□□□□ -0.63
BUD31YCR063W CDC27P38042 758 aa11.07□□□□□ -0.64
BUD31YCR063W PDR12Q02785 1511 aa11.07□□□□□ -0.64
BUD31YCR063W PDR10P51533 1564 aa11.07□□□□□ -0.64
BUD31YCR063W GCN2P15442 1659 aa11.04□□□□□ -0.64
BUD31YCR063W SRB8P25648 1427 aa11.02□□□□□ -0.64
BUD31YCR063W BUD3P25558 1636 aa10.99□□□□□ -0.65
BUD31YCR063W BBC1P47068 1157 aa10.99□□□□□ -0.65
BUD31YCR063W MET5P47169 1442 aa10.99□□□□□ -0.65
BUD31YCR063W NUP157P40064 1391 aaKnown RBP10.97□□□□□ -0.65
BUD31YCR063W BCH2P36122 765 aa10.96□□□□□ -0.65
BUD31YCR063W MET10P39692 1035 aa10.95□□□□□ -0.66
BUD31YCR063W YGL015CP33199 130 aa10.94□□□□□ -0.66
BUD31YCR063W CKB1P43639 278 aa10.93□□□□□ -0.66
BUD31YCR063W RAM2P29703 316 aa10.88□□□□□ -0.67
BUD31YCR063W IQG1Q12280 1495 aa10.87□□□□□ -0.67
BUD31YCR063W MMS1Q06211 1407 aa10.86□□□□□ -0.67
BUD31YCR063W YOR093CQ12275 1648 aa10.86□□□□□ -0.67
BUD31YCR063W CHC1P22137 1653 aaKnown RBP10.84□□□□□ -0.67
BUD31YCR063W YSP2Q06681 1438 aa10.84□□□□□ -0.67
BUD31YCR063W EPS1P40557 701 aa10.83□□□□□ -0.68
BUD31YCR063W DOP1Q03921 1698 aa10.82□□□□□ -0.68
BUD31YCR063W POL5P39985 1022 aaKnown RBP10.82□□□□□ -0.68
BUD31YCR063W BUD21Q08492 214 aaPredicted RBP10.82□□□□□ -0.68
BUD31YCR063W RPN1P38764 993 aaKnown RBP10.81□□□□□ -0.68
BUD31YCR063W SEC7P11075 2009 aaKnown RBP10.8□□□□□ -0.68
BUD31YCR063W SET1P38827 1080 aaKnown RBP10.8□□□□□ -0.68
BUD31YCR063W PDR5P33302 1511 aaKnown RBP10.79□□□□□ -0.68
BUD31YCR063W MRM1P25270 412 aa10.78□□□□□ -0.68
BUD31YCR063W NOP7P53261 605 aaKnown RBP10.76□□□□□ -0.69
BUD31YCR063W YPR148CQ06523 435 aa10.76□□□□□ -0.69
BUD31YCR063W BDF1P35817 686 aa10.74□□□□□ -0.69
BUD31YCR063W BNR1P40450 1375 aa10.74□□□□□ -0.69
BUD31YCR063W LTE1P07866 1435 aa10.72□□□□□ -0.69
BUD31YCR063W RTG3P38165 486 aa10.71□□□□□ -0.69
BUD31YCR063W RCR1P38212 213 aa10.71□□□□□ -0.69
BUD31YCR063W TRM3Q07527 1436 aa10.71□□□□□ -0.69
BUD31YCR063W SPB4P25808 606 aaPredicted RBP10.7□□□□□ -0.7
BUD31YCR063W VPS70P47161 811 aa10.7□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 233.2 ms