RNA–Protein interactions for RNA: YCR039C

MATALPHA2, Transcript of Homeobox-domain protein, yeastyeast

Gene MATALPHA2, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA2YCR039C PTC4P38089 393 aa9.21□□□□□ -0.94
MATALPHA2YCR039C RAM2P29703 316 aa9.2□□□□□ -0.94
MATALPHA2YCR039C GRE2Q12068 342 aaKnown RBP9.2□□□□□ -0.94
MATALPHA2YCR039C MIF2P35201 549 aa9.19□□□□□ -0.94
MATALPHA2YCR039C SAP30P38429 201 aa9.19□□□□□ -0.94
MATALPHA2YCR039C YDL129WQ07555 291 aa9.19□□□□□ -0.94
MATALPHA2YCR039C ATH1P48016 1211 aa9.13□□□□□ -0.95
MATALPHA2YCR039C PTC3P34221 468 aaKnown RBP9.12□□□□□ -0.95
MATALPHA2YCR039C EDS1P38073 919 aa9.12□□□□□ -0.95
MATALPHA2YCR039C GUT1P32190 709 aa9.11□□□□□ -0.95
MATALPHA2YCR039C COQ8P27697 501 aa9.09□□□□□ -0.95
MATALPHA2YCR039C CHL1P22516 861 aaPredicted RBP9.08□□□□□ -0.96
MATALPHA2YCR039C PRE3P38624 215 aa9.05□□□□□ -0.96
MATALPHA2YCR039C PML39Q03760 334 aa9.03□□□□□ -0.96
MATALPHA2YCR039C BCK2P33306 851 aa9.01□□□□□ -0.97
MATALPHA2YCR039C NST1P53935 1240 aa8.97□□□□□ -0.97
MATALPHA2YCR039C NOP53Q12080 455 aaKnown RBP8.97□□□□□ -0.97
MATALPHA2YCR039C SOL3P38858 249 aa8.94□□□□□ -0.98
MATALPHA2YCR039C ELP4Q02884 456 aaKnown RBP8.93□□□□□ -0.98
MATALPHA2YCR039C AI4P03878 556 aa8.92□□□□□ -0.98
MATALPHA2YCR039C MPH3P0CE00 602 aa8.91□□□□□ -0.98
MATALPHA2YCR039C YDR344CQ05510 147 aa8.9□□□□□ -0.98
MATALPHA2YCR039C MID1P41821 548 aa8.89□□□□□ -0.99
MATALPHA2YCR039C ARH1P48360 493 aa8.88□□□□□ -0.99
MATALPHA2YCR039C PEX29Q03370 554 aa8.87□□□□□ -0.99
MATALPHA2YCR039C YGR273CP53329 174 aa8.86□□□□□ -0.99
MATALPHA2YCR039C VRP1P37370 817 aa8.85□□□□□ -0.99
MATALPHA2YCR039C ILV3P39522 585 aaKnown RBP8.84□□□□□ -0.99
MATALPHA2YCR039C XDJ1P39102 459 aa8.8□□□□□ -1
MATALPHA2YCR039C SPT23P35210 1082 aa8.78□□□□□ -1
MATALPHA2YCR039C HAP5Q02516 242 aa8.77□□□□□ -1.01
MATALPHA2YCR039C MPC54Q08550 464 aa8.75□□□□□ -1.01
MATALPHA2YCR039C SET1P38827 1080 aaKnown RBP8.74□□□□□ -1.01
MATALPHA2YCR039C BNI4P53858 892 aa8.72□□□□□ -1.01
MATALPHA2YCR039C SLI15P38283 698 aa8.71□□□□□ -1.02
MATALPHA2YCR039C PTC2P39966 464 aaKnown RBP8.68□□□□□ -1.02
MATALPHA2YCR039C KEX1P09620 729 aa8.67□□□□□ -1.02
MATALPHA2YCR039C NMA111P53920 997 aa8.67□□□□□ -1.02
MATALPHA2YCR039C DPL1Q05567 589 aa8.67□□□□□ -1.02
MATALPHA2YCR039C YML082WQ04533 649 aaKnown RBP8.66□□□□□ -1.02
MATALPHA2YCR039C DPS1P04802 557 aaKnown RBP8.63□□□□□ -1.03
MATALPHA2YCR039C YLR326WQ06170 240 aaKnown RBP8.59□□□□□ -1.03
MATALPHA2YCR039C UBP14P38237 781 aaKnown RBP8.58□□□□□ -1.04
MATALPHA2YCR039C VHR2P40041 505 aa8.58□□□□□ -1.04
MATALPHA2YCR039C ISU2Q12056 156 aa8.58□□□□□ -1.04
MATALPHA2YCR039C IFH1P39520 1085 aa8.56□□□□□ -1.04
MATALPHA2YCR039C CDC73Q06697 393 aa8.55□□□□□ -1.04
MATALPHA2YCR039C RAD54P32863 898 aa8.53□□□□□ -1.04
MATALPHA2YCR039C PCS60P38137 543 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
MATALPHA2YCR039C RPP1BP10622 106 aaKnown RBP8.51□□□□□ -1.05
MATALPHA2YCR039C YPR015CQ12531 247 aa8.49□□□□□ -1.05
MATALPHA2YCR039C RAM1P22007 431 aa8.48□□□□□ -1.05
MATALPHA2YCR039C KIC1P38692 1080 aa8.45□□□□□ -1.06
MATALPHA2YCR039C YPR148CQ06523 435 aa8.44□□□□□ -1.06
MATALPHA2YCR039C YDR090CQ03193 310 aa8.43□□□□□ -1.06
MATALPHA2YCR039C PDR1P12383 1068 aa8.42□□□□□ -1.06
MATALPHA2YCR039C GYP1Q08484 637 aa8.42□□□□□ -1.06
MATALPHA2YCR039C REF2P42073 533 aaPredicted RBP8.4□□□□□ -1.06
MATALPHA2YCR039C SRC1Q03707 834 aa8.38□□□□□ -1.07
MATALPHA2YCR039C PEX21P50091 288 aa8.37□□□□□ -1.07
MATALPHA2YCR039C SAS4Q04003 481 aa8.37□□□□□ -1.07
MATALPHA2YCR039C RAS1P01119 309 aa8.34□□□□□ -1.07
MATALPHA2YCR039C VPS70P47161 811 aa8.34□□□□□ -1.07
MATALPHA2YCR039C CSC1Q06538 782 aa8.34□□□□□ -1.07
MATALPHA2YCR039C TFB4Q12004 338 aa8.33□□□□□ -1.08
MATALPHA2YCR039C GAP1P19145 602 aaPredicted RBP8.32□□□□□ -1.08
MATALPHA2YCR039C YRR1Q12172 810 aa8.32□□□□□ -1.08
MATALPHA2YCR039C AMS1P22855 1083 aa8.31□□□□□ -1.08
MATALPHA2YCR039C MAK21Q12176 1025 aaKnown RBP8.31□□□□□ -1.08
MATALPHA2YCR039C TUM1Q08686 304 aaKnown RBP8.28□□□□□ -1.08
MATALPHA2YCR039C COX6P00427 148 aa8.27□□□□□ -1.09
MATALPHA2YCR039C ORC6P38826 435 aa8.27□□□□□ -1.09
MATALPHA2YCR039C SDH2P21801 266 aa8.26□□□□□ -1.09
MATALPHA2YCR039C BUD20Q08004 166 aaPredicted RBP8.26□□□□□ -1.09
MATALPHA2YCR039C PRT1P06103 763 aaKnown RBP8.25□□□□□ -1.09
MATALPHA2YCR039C MRF1P30775 413 aaPredicted RBP8.25□□□□□ -1.09
MATALPHA2YCR039C YEL077CQ3E7X8 1277 aa8.25□□□□□ -1.09
MATALPHA2YCR039C NUD1P32336 851 aa8.24□□□□□ -1.09
MATALPHA2YCR039C STR2P47164 639 aa8.24□□□□□ -1.09
MATALPHA2YCR039C NPL4P33755 580 aa8.22□□□□□ -1.09
MATALPHA2YCR039C ISM1P48526 1002 aa8.22□□□□□ -1.09
MATALPHA2YCR039C TRK1P12685 1235 aa8.2□□□□□ -1.1
MATALPHA2YCR039C MVP1P40959 511 aaKnown RBP8.19□□□□□ -1.1
MATALPHA2YCR039C CKB1P43639 278 aa8.17□□□□□ -1.1
MATALPHA2YCR039C ERG12P07277 443 aa8.16□□□□□ -1.1
MATALPHA2YCR039C RGR1P19263 1082 aa8.14□□□□□ -1.11
MATALPHA2YCR039C GCD11P32481 527 aaKnown RBP8.14□□□□□ -1.11
MATALPHA2YCR039C YPR109WQ06104 294 aa8.13□□□□□ -1.11
MATALPHA2YCR039C TY1A-DR4O74302 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C PBS2P08018 668 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-HP0C2I4 478 aaKnown RBP8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-AP0CX57 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-PR1P0CX58 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-ORP0CX59 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-PR2P0CX60 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-DR5P0CX65 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-ER2P0CX66 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-GR3P0CX67 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-LR1P0CX68 440 aa8.11□□□□□ -1.11
MATALPHA2YCR039C TY1A-MR2P0CX69 440 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms