RNA–Protein interactions for RNA: YCL037C

SRO9, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SRO9, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO9YCL037C IFH1P39520 1085 aa8.99□□□□□ -0.97
SRO9YCL037C YEL023CP39992 682 aa8.99□□□□□ -0.97
SRO9YCL037C RTG1P32607 177 aa8.97□□□□□ -0.97
SRO9YCL037C YNL035CP53962 389 aaKnown RBP8.96□□□□□ -0.98
SRO9YCL037C FKH1P40466 484 aa8.95□□□□□ -0.98
SRO9YCL037C JIP4Q03361 876 aa8.94□□□□□ -0.98
SRO9YCL037C VPS70P47161 811 aa8.93□□□□□ -0.98
SRO9YCL037C YPR148CQ06523 435 aa8.93□□□□□ -0.98
SRO9YCL037C PTC4P38089 393 aa8.92□□□□□ -0.98
SRO9YCL037C SOL3P38858 249 aa8.91□□□□□ -0.98
SRO9YCL037C AIR2Q12476 344 aaKnown RBP8.9□□□□□ -0.98
SRO9YCL037C SEC61P32915 480 aa8.89□□□□□ -0.99
SRO9YCL037C YGR273CP53329 174 aa8.89□□□□□ -0.99
SRO9YCL037C DAN4P47179 1161 aa8.88□□□□□ -0.99
SRO9YCL037C SAS10Q12136 610 aaPredicted RBP8.87□□□□□ -0.99
SRO9YCL037C NCR1Q12200 1170 aa8.87□□□□□ -0.99
SRO9YCL037C TFG1P41895 735 aaPredicted RBP8.86□□□□□ -0.99
SRO9YCL037C NST1P53935 1240 aa8.86□□□□□ -0.99
SRO9YCL037C YJL171CP46992 396 aa8.84□□□□□ -0.99
SRO9YCL037C VHR2P40041 505 aa8.83□□□□□ -1
SRO9YCL037C AI4P03878 556 aa8.82□□□□□ -1
SRO9YCL037C MPH3P0CE00 602 aa8.82□□□□□ -1
SRO9YCL037C ILV3P39522 585 aaKnown RBP8.8□□□□□ -1
SRO9YCL037C PML39Q03760 334 aa8.8□□□□□ -1
SRO9YCL037C KEX1P09620 729 aa8.79□□□□□ -1
SRO9YCL037C REF2P42073 533 aaPredicted RBP8.79□□□□□ -1
SRO9YCL037C CKB1P43639 278 aa8.78□□□□□ -1
SRO9YCL037C YLR326WQ06170 240 aaKnown RBP8.78□□□□□ -1
SRO9YCL037C BMT6Q12291 365 aa8.78□□□□□ -1
SRO9YCL037C UBP14P38237 781 aaKnown RBP8.77□□□□□ -1.01
SRO9YCL037C YDL129WQ07555 291 aa8.77□□□□□ -1.01
SRO9YCL037C SAP30P38429 201 aa8.76□□□□□ -1.01
SRO9YCL037C MID1P41821 548 aa8.73□□□□□ -1.01
SRO9YCL037C RAD54P32863 898 aa8.72□□□□□ -1.01
SRO9YCL037C KIC1P38692 1080 aa8.72□□□□□ -1.01
SRO9YCL037C PBS2P08018 668 aa8.7□□□□□ -1.02
SRO9YCL037C SLI15P38283 698 aa8.7□□□□□ -1.02
SRO9YCL037C PEX29Q03370 554 aa8.7□□□□□ -1.02
SRO9YCL037C PCS60P38137 543 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SRO9YCL037C YDR090CQ03193 310 aa8.69□□□□□ -1.02
SRO9YCL037C SPB4P25808 606 aaPredicted RBP8.67□□□□□ -1.02
SRO9YCL037C MAK21Q12176 1025 aaKnown RBP8.65□□□□□ -1.02
SRO9YCL037C COX6P00427 148 aa8.64□□□□□ -1.03
SRO9YCL037C MPC54Q08550 464 aa8.62□□□□□ -1.03
SRO9YCL037C DSF2P38213 736 aa8.59□□□□□ -1.03
SRO9YCL037C YDR344CQ05510 147 aa8.59□□□□□ -1.03
SRO9YCL037C CDC73Q06697 393 aa8.59□□□□□ -1.03
SRO9YCL037C MAM3Q12296 706 aa8.59□□□□□ -1.03
SRO9YCL037C ELP4Q02884 456 aaKnown RBP8.58□□□□□ -1.04
SRO9YCL037C DPL1Q05567 589 aa8.58□□□□□ -1.04
SRO9YCL037C RPP1BP10622 106 aaKnown RBP8.56□□□□□ -1.04
SRO9YCL037C PRE3P38624 215 aa8.55□□□□□ -1.04
SRO9YCL037C ARH1P48360 493 aa8.55□□□□□ -1.04
SRO9YCL037C IES2P40154 320 aa8.54□□□□□ -1.04
SRO9YCL037C NMA111P53920 997 aa8.54□□□□□ -1.04
SRO9YCL037C HAP5Q02516 242 aa8.54□□□□□ -1.04
SRO9YCL037C CHL1P22516 861 aaPredicted RBP8.53□□□□□ -1.04
SRO9YCL037C ORC6P38826 435 aa8.51□□□□□ -1.05
SRO9YCL037C ISU2Q12056 156 aa8.5□□□□□ -1.05
SRO9YCL037C PEX21P50091 288 aa8.49□□□□□ -1.05
SRO9YCL037C SPT23P35210 1082 aa8.46□□□□□ -1.06
SRO9YCL037C CSC1Q06538 782 aa8.46□□□□□ -1.06
SRO9YCL037C NUP42P49686 430 aaKnown RBP8.45□□□□□ -1.06
SRO9YCL037C GAP1P19145 602 aaPredicted RBP8.44□□□□□ -1.06
SRO9YCL037C BNI4P53858 892 aa8.44□□□□□ -1.06
SRO9YCL037C DIT2P21595 489 aa8.42□□□□□ -1.06
SRO9YCL037C PTC2P39966 464 aaKnown RBP8.42□□□□□ -1.06
SRO9YCL037C TFB4Q12004 338 aa8.42□□□□□ -1.06
SRO9YCL037C MVP1P40959 511 aaKnown RBP8.41□□□□□ -1.06
SRO9YCL037C TUM1Q08686 304 aaKnown RBP8.41□□□□□ -1.06
SRO9YCL037C YRR1Q12172 810 aa8.41□□□□□ -1.06
SRO9YCL037C PSE1P32337 1089 aaKnown RBP8.4□□□□□ -1.06
SRO9YCL037C LEU3P08638 886 aa8.39□□□□□ -1.07
SRO9YCL037C RGR1P19263 1082 aa8.39□□□□□ -1.07
SRO9YCL037C PDR1P12383 1068 aa8.38□□□□□ -1.07
SRO9YCL037C YPR109WQ06104 294 aa8.36□□□□□ -1.07
SRO9YCL037C BCK2P33306 851 aa8.35□□□□□ -1.07
SRO9YCL037C VRP1P37370 817 aa8.35□□□□□ -1.07
SRO9YCL037C GLC3P32775 704 aa8.33□□□□□ -1.08
SRO9YCL037C YNR021WP53723 404 aaKnown RBP8.33□□□□□ -1.08
SRO9YCL037C YML082WQ04533 649 aaKnown RBP8.33□□□□□ -1.08
SRO9YCL037C RAM1P22007 431 aa8.31□□□□□ -1.08
SRO9YCL037C NUD1P32336 851 aa8.3□□□□□ -1.08
SRO9YCL037C ATF2P53296 535 aa8.3□□□□□ -1.08
SRO9YCL037C YPR015CQ12531 247 aa8.3□□□□□ -1.08
SRO9YCL037C CLB5P30283 435 aa8.29□□□□□ -1.08
SRO9YCL037C TEA1P47988 759 aa8.29□□□□□ -1.08
SRO9YCL037C NPL4P33755 580 aa8.28□□□□□ -1.08
SRO9YCL037C STR2P47164 639 aa8.25□□□□□ -1.09
SRO9YCL037C ISM1P48526 1002 aa8.25□□□□□ -1.09
SRO9YCL037C TAF7Q05021 590 aa8.24□□□□□ -1.09
SRO9YCL037C RPN1P38764 993 aaKnown RBP8.23□□□□□ -1.09
SRO9YCL037C GYP1Q08484 637 aa8.23□□□□□ -1.09
SRO9YCL037C AIM7Q12156 149 aa8.22□□□□□ -1.09
SRO9YCL037C XDJ1P39102 459 aa8.21□□□□□ -1.1
SRO9YCL037C BUD20Q08004 166 aaPredicted RBP8.21□□□□□ -1.1
SRO9YCL037C NIS1P53939 407 aa8.2□□□□□ -1.1
SRO9YCL037C GCD11P32481 527 aaKnown RBP8.19□□□□□ -1.1
SRO9YCL037C LEO1P38439 464 aa8.19□□□□□ -1.1
SRO9YCL037C KEX2P13134 814 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms