RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeastyeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APM3YBR288C GUT1P32190 709 aa9.55□□□□□ -0.88
APM3YBR288C NCR1Q12200 1170 aa9.54□□□□□ -0.88
APM3YBR288C YEL023CP39992 682 aa9.53□□□□□ -0.88
APM3YBR288C JIP4Q03361 876 aa9.53□□□□□ -0.88
APM3YBR288C SEC61P32915 480 aa9.53□□□□□ -0.88
APM3YBR288C SET1P38827 1080 aaKnown RBP9.53□□□□□ -0.88
APM3YBR288C NOP53Q12080 455 aaKnown RBP9.53□□□□□ -0.88
APM3YBR288C DAN4P47179 1161 aa9.52□□□□□ -0.89
APM3YBR288C PTC4P38089 393 aa9.5□□□□□ -0.89
APM3YBR288C BMT6Q12291 365 aa9.47□□□□□ -0.89
APM3YBR288C TFG1P41895 735 aaPredicted RBP9.46□□□□□ -0.9
APM3YBR288C SOL3P38858 249 aa9.45□□□□□ -0.9
APM3YBR288C NST1P53935 1240 aa9.42□□□□□ -0.9
APM3YBR288C YDL129WQ07555 291 aa9.38□□□□□ -0.91
APM3YBR288C SAP30P38429 201 aa9.37□□□□□ -0.91
APM3YBR288C YGR273CP53329 174 aa9.37□□□□□ -0.91
APM3YBR288C DMA1P38823 416 aa9.36□□□□□ -0.91
APM3YBR288C MPH3P0CE00 602 aa9.34□□□□□ -0.91
APM3YBR288C PML39Q03760 334 aa9.34□□□□□ -0.91
APM3YBR288C AI4P03878 556 aa9.33□□□□□ -0.92
APM3YBR288C ILV3P39522 585 aaKnown RBP9.32□□□□□ -0.92
APM3YBR288C IFH1P39520 1085 aa9.29□□□□□ -0.92
APM3YBR288C MID1P41821 548 aa9.28□□□□□ -0.92
APM3YBR288C YPR148CQ06523 435 aa9.25□□□□□ -0.93
APM3YBR288C VHR2P40041 505 aa9.23□□□□□ -0.93
APM3YBR288C KEX1P09620 729 aa9.22□□□□□ -0.93
APM3YBR288C UBP14P38237 781 aaKnown RBP9.21□□□□□ -0.93
APM3YBR288C VPS70P47161 811 aa9.21□□□□□ -0.93
APM3YBR288C YDR344CQ05510 147 aa9.21□□□□□ -0.94
APM3YBR288C YLR326WQ06170 240 aaKnown RBP9.21□□□□□ -0.94
APM3YBR288C SLI15P38283 698 aa9.19□□□□□ -0.94
APM3YBR288C PEX29Q03370 554 aa9.18□□□□□ -0.94
APM3YBR288C CHL1P22516 861 aaPredicted RBP9.17□□□□□ -0.94
APM3YBR288C PRE3P38624 215 aa9.17□□□□□ -0.94
APM3YBR288C ELP4Q02884 456 aaKnown RBP9.15□□□□□ -0.94
APM3YBR288C REF2P42073 533 aaPredicted RBP9.14□□□□□ -0.95
APM3YBR288C ARH1P48360 493 aa9.13□□□□□ -0.95
APM3YBR288C MPC54Q08550 464 aa9.13□□□□□ -0.95
APM3YBR288C RAD54P32863 898 aa9.12□□□□□ -0.95
APM3YBR288C PCS60P38137 543 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
APM3YBR288C YDR090CQ03193 310 aa9.1□□□□□ -0.95
APM3YBR288C DPL1Q05567 589 aa9.08□□□□□ -0.96
APM3YBR288C HAP5Q02516 242 aa9.07□□□□□ -0.96
APM3YBR288C SAS10Q12136 610 aaPredicted RBP9.07□□□□□ -0.96
APM3YBR288C KIC1P38692 1080 aa9.06□□□□□ -0.96
APM3YBR288C NMA111P53920 997 aa9.06□□□□□ -0.96
APM3YBR288C CDC73Q06697 393 aa9.06□□□□□ -0.96
APM3YBR288C RQC2Q12532 1038 aaKnown RBP9.04□□□□□ -0.96
APM3YBR288C CKB1P43639 278 aa9.02□□□□□ -0.96
APM3YBR288C BCK2P33306 851 aa9.02□□□□□ -0.97
APM3YBR288C SPT23P35210 1082 aa9.02□□□□□ -0.97
APM3YBR288C COX6P00427 148 aa8.99□□□□□ -0.97
APM3YBR288C MAK21Q12176 1025 aaKnown RBP8.99□□□□□ -0.97
APM3YBR288C BNI4P53858 892 aa8.98□□□□□ -0.97
APM3YBR288C ISU2Q12056 156 aa8.98□□□□□ -0.97
APM3YBR288C VRP1P37370 817 aa8.97□□□□□ -0.97
APM3YBR288C PBS2P08018 668 aa8.96□□□□□ -0.97
APM3YBR288C RPP1BP10622 106 aaKnown RBP8.96□□□□□ -0.97
APM3YBR288C PTC2P39966 464 aaKnown RBP8.94□□□□□ -0.98
APM3YBR288C ORC6P38826 435 aa8.89□□□□□ -0.99
APM3YBR288C YML082WQ04533 649 aaKnown RBP8.89□□□□□ -0.99
APM3YBR288C GAP1P19145 602 aaPredicted RBP8.88□□□□□ -0.99
APM3YBR288C PDR1P12383 1068 aa8.87□□□□□ -0.99
APM3YBR288C SPB4P25808 606 aaPredicted RBP8.87□□□□□ -0.99
APM3YBR288C PEX21P50091 288 aa8.87□□□□□ -0.99
APM3YBR288C CSC1Q06538 782 aa8.86□□□□□ -0.99
APM3YBR288C MAM3Q12296 706 aa8.85□□□□□ -0.99
APM3YBR288C RAM1P22007 431 aa8.84□□□□□ -0.99
APM3YBR288C DSF2P38213 736 aa8.84□□□□□ -0.99
APM3YBR288C XDJ1P39102 459 aa8.84□□□□□ -0.99
APM3YBR288C YRR1Q12172 810 aa8.84□□□□□ -0.99
APM3YBR288C YPR015CQ12531 247 aa8.84□□□□□ -0.99
APM3YBR288C TFB4Q12004 338 aa8.83□□□□□ -1
APM3YBR288C TUM1Q08686 304 aaKnown RBP8.82□□□□□ -1
APM3YBR288C IES2P40154 320 aa8.8□□□□□ -1
APM3YBR288C MVP1P40959 511 aaKnown RBP8.8□□□□□ -1
APM3YBR288C RGR1P19263 1082 aa8.78□□□□□ -1
APM3YBR288C YPR109WQ06104 294 aa8.75□□□□□ -1.01
APM3YBR288C NUP42P49686 430 aaKnown RBP8.74□□□□□ -1.01
APM3YBR288C PSE1P32337 1089 aaKnown RBP8.73□□□□□ -1.01
APM3YBR288C NUD1P32336 851 aa8.72□□□□□ -1.01
APM3YBR288C DIT2P21595 489 aa8.7□□□□□ -1.02
APM3YBR288C STR2P47164 639 aa8.7□□□□□ -1.02
APM3YBR288C GYP1Q08484 637 aa8.7□□□□□ -1.02
APM3YBR288C ISM1P48526 1002 aa8.7□□□□□ -1.02
APM3YBR288C BUD20Q08004 166 aaPredicted RBP8.7□□□□□ -1.02
APM3YBR288C NPL4P33755 580 aa8.67□□□□□ -1.02
APM3YBR288C DPS1P04802 557 aaKnown RBP8.65□□□□□ -1.02
APM3YBR288C PRT1P06103 763 aaKnown RBP8.64□□□□□ -1.03
APM3YBR288C SAS4Q04003 481 aa8.64□□□□□ -1.03
APM3YBR288C GCD11P32481 527 aaKnown RBP8.62□□□□□ -1.03
APM3YBR288C CLB5P30283 435 aa8.61□□□□□ -1.03
APM3YBR288C TY1A-DR4O74302 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-HP0C2I4 478 aaKnown RBP8.59□□□□□ -1.03
APM3YBR288C TY1A-AP0CX57 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-PR1P0CX58 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-ORP0CX59 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-PR2P0CX60 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-DR5P0CX65 440 aa8.59□□□□□ -1.03
APM3YBR288C TY1A-ER2P0CX66 440 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms