RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C TY1B-LR1Q12088 1755 aaKnown RBP6.94□□□□□ -1.3
ROT2YBR229C TY1B-NL1Q12112 1755 aa6.94□□□□□ -1.3
ROT2YBR229C TY1B-GR1Q12141 1755 aa6.94□□□□□ -1.3
ROT2YBR229C TY1B-BLQ12490 1755 aa6.94□□□□□ -1.3
ROT2YBR229C YBT1P32386 1661 aa6.91□□□□□ -1.3
ROT2YBR229C ESC1Q03661 1658 aaKnown RBP6.9□□□□□ -1.3
ROT2YBR229C IRC20Q06554 1556 aa6.9□□□□□ -1.31
ROT2YBR229C VPS15P22219 1454 aa6.88□□□□□ -1.31
ROT2YBR229C RQC2Q12532 1038 aaKnown RBP6.87□□□□□ -1.31
ROT2YBR229C GEA2P39993 1459 aaKnown RBP6.87□□□□□ -1.31
ROT2YBR229C CAT8P39113 1433 aa6.87□□□□□ -1.31
ROT2YBR229C NTE1Q04958 1679 aa6.87□□□□□ -1.31
ROT2YBR229C RPO21P04050 1733 aaKnown RBP6.86□□□□□ -1.31
ROT2YBR229C RPA190P10964 1664 aaKnown RBP6.85□□□□□ -1.31
ROT2YBR229C NSR1P27476 414 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
ROT2YBR229C DNF1P32660 1571 aa6.82□□□□□ -1.32
ROT2YBR229C PDR10P51533 1564 aa6.82□□□□□ -1.32
ROT2YBR229C RTT106P40161 455 aa6.81□□□□□ -1.32
ROT2YBR229C POL5P39985 1022 aaKnown RBP6.8□□□□□ -1.32
ROT2YBR229C SRB8P25648 1427 aa6.79□□□□□ -1.32
ROT2YBR229C ARO1P08566 1588 aaKnown RBP6.78□□□□□ -1.32
ROT2YBR229C GCN2P15442 1659 aa6.78□□□□□ -1.32
ROT2YBR229C GDB1Q06625 1536 aa6.77□□□□□ -1.33
ROT2YBR229C PDR12Q02785 1511 aa6.76□□□□□ -1.33
ROT2YBR229C NUP159P40477 1460 aa6.75□□□□□ -1.33
ROT2YBR229C NOP2P40991 618 aaKnown RBP6.74□□□□□ -1.33
ROT2YBR229C ENP1P38333 483 aaKnown RBP6.73□□□□□ -1.33
ROT2YBR229C SPO14P36126 1683 aa6.72□□□□□ -1.33
ROT2YBR229C PDR5P33302 1511 aaKnown RBP6.72□□□□□ -1.33
ROT2YBR229C SEC3P33332 1336 aaKnown RBP6.71□□□□□ -1.33
ROT2YBR229C IQG1Q12280 1495 aa6.7□□□□□ -1.34
ROT2YBR229C MMS1Q06211 1407 aa6.7□□□□□ -1.34
ROT2YBR229C MET10P39692 1035 aa6.69□□□□□ -1.34
ROT2YBR229C YRF1-1P0CX20 1796 aa6.69□□□□□ -1.34
ROT2YBR229C YRF1-5P0CX21 1796 aa6.69□□□□□ -1.34
ROT2YBR229C YRF1-8P0CX22 1796 aa6.69□□□□□ -1.34
ROT2YBR229C NUP157P40064 1391 aaKnown RBP6.68□□□□□ -1.34
ROT2YBR229C CKB1P43639 278 aa6.67□□□□□ -1.34
ROT2YBR229C YSP2Q06681 1438 aa6.67□□□□□ -1.34
ROT2YBR229C BUD3P25558 1636 aa6.66□□□□□ -1.34
ROT2YBR229C BUD21Q08492 214 aaPredicted RBP6.65□□□□□ -1.34
ROT2YBR229C SPT7P35177 1332 aa6.64□□□□□ -1.35
ROT2YBR229C MET5P47169 1442 aa6.64□□□□□ -1.35
ROT2YBR229C NOP7P53261 605 aaKnown RBP6.63□□□□□ -1.35
ROT2YBR229C YOR093CQ12275 1648 aa6.63□□□□□ -1.35
ROT2YBR229C CHC1P22137 1653 aaKnown RBP6.59□□□□□ -1.35
ROT2YBR229C MHP1P43638 1398 aa6.59□□□□□ -1.35
ROT2YBR229C TY3B-IQ7LHG5 1498 aaKnown RBP6.58□□□□□ -1.36
ROT2YBR229C PAF1P38351 445 aa6.58□□□□□ -1.36
ROT2YBR229C MTC1P47018 478 aaKnown RBP6.57□□□□□ -1.36
ROT2YBR229C LTE1P07866 1435 aa6.57□□□□□ -1.36
ROT2YBR229C SEC7P11075 2009 aaKnown RBP6.57□□□□□ -1.36
ROT2YBR229C BNR1P40450 1375 aa6.56□□□□□ -1.36
ROT2YBR229C BFR2Q06631 534 aaKnown RBP6.56□□□□□ -1.36
ROT2YBR229C YLR419WQ06698 1435 aaKnown RBP6.56□□□□□ -1.36
ROT2YBR229C RAV1P47104 1357 aa6.54□□□□□ -1.36
ROT2YBR229C PRS1P32895 427 aaKnown RBP6.53□□□□□ -1.36
ROT2YBR229C RTC1Q08281 1341 aa6.52□□□□□ -1.36
ROT2YBR229C VMR1P38735 1592 aa6.51□□□□□ -1.37
ROT2YBR229C PSD2P53037 1138 aaKnown RBP6.5□□□□□ -1.37
ROT2YBR229C PDR11P40550 1411 aa6.5□□□□□ -1.37
ROT2YBR229C NUP188P52593 1655 aaKnown RBP6.5□□□□□ -1.37
ROT2YBR229C TRM3Q07527 1436 aa6.49□□□□□ -1.37
ROT2YBR229C DOP1Q03921 1698 aa6.49□□□□□ -1.37
ROT2YBR229C IML1P47170 1584 aa6.48□□□□□ -1.37
ROT2YBR229C DRS2P39524 1355 aa6.46□□□□□ -1.37
ROT2YBR229C ORC1P54784 914 aaPredicted RBP6.46□□□□□ -1.38
ROT2YBR229C NUP192P47054 1683 aa6.46□□□□□ -1.38
ROT2YBR229C LEU3P08638 886 aa6.45□□□□□ -1.38
ROT2YBR229C ESL2P36168 1195 aa6.45□□□□□ -1.38
ROT2YBR229C PDS5Q04264 1277 aa6.45□□□□□ -1.38
ROT2YBR229C TAF5P38129 798 aa6.44□□□□□ -1.38
ROT2YBR229C SCT1P32784 759 aa6.43□□□□□ -1.38
ROT2YBR229C DNF2Q12675 1612 aa6.42□□□□□ -1.38
ROT2YBR229C KIP3P53086 805 aaKnown RBP6.41□□□□□ -1.38
ROT2YBR229C TFA1P36100 482 aa6.4□□□□□ -1.38
ROT2YBR229C NST1P53935 1240 aa6.37□□□□□ -1.39
ROT2YBR229C RPP0P05317 312 aaKnown RBP6.36□□□□□ -1.39
ROT2YBR229C IOC4Q04213 475 aa6.36□□□□□ -1.39
ROT2YBR229C MLP1Q02455 1875 aaKnown RBP6.35□□□□□ -1.39
ROT2YBR229C SPE2P21182 396 aa6.35□□□□□ -1.39
ROT2YBR229C BCK1Q01389 1478 aa6.34□□□□□ -1.39
ROT2YBR229C IPL1P38991 367 aa6.33□□□□□ -1.4
ROT2YBR229C URN1Q06525 465 aaKnown RBP6.33□□□□□ -1.4
ROT2YBR229C CDC45Q08032 650 aa6.32□□□□□ -1.4
ROT2YBR229C YAP3P38749 330 aa6.32□□□□□ -1.4
ROT2YBR229C CFT1Q06632 1357 aaKnown RBP6.32□□□□□ -1.4
ROT2YBR229C VPS27P40343 622 aaKnown RBP6.32□□□□□ -1.4
ROT2YBR229C HAP1P0CE41 1502 aa6.31□□□□□ -1.4
ROT2YBR229C TYS1P36421 394 aaKnown RBP6.31□□□□□ -1.4
ROT2YBR229C FKH1P40466 484 aa6.31□□□□□ -1.4
ROT2YBR229C ALD4P46367 519 aaKnown RBP6.31□□□□□ -1.4
ROT2YBR229C RTG3P38165 486 aa6.3□□□□□ -1.4
ROT2YBR229C RAD9P14737 1309 aa6.29□□□□□ -1.4
ROT2YBR229C TAF8Q03750 510 aa6.29□□□□□ -1.4
ROT2YBR229C BNI1P41832 1953 aa6.29□□□□□ -1.4
ROT2YBR229C SNF2P22082 1703 aa6.28□□□□□ -1.4
ROT2YBR229C CHZ1P40019 153 aaPredicted RBP6.28□□□□□ -1.4
ROT2YBR229C YRB30P53107 440 aaPredicted RBP6.27□□□□□ -1.41
ROT2YBR229C RVB2Q12464 471 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms