RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W DCW1P36091 449 aa5.55□□□□□ -1.52
SWD3YBR175W TAF7Q05021 590 aa5.55□□□□□ -1.52
SWD3YBR175W YDL129WQ07555 291 aa5.55□□□□□ -1.52
SWD3YBR175W YEL023CP39992 682 aa5.53□□□□□ -1.52
SWD3YBR175W CHL1P22516 861 aaPredicted RBP5.51□□□□□ -1.53
SWD3YBR175W PRE3P38624 215 aa5.49□□□□□ -1.53
SWD3YBR175W BCK2P33306 851 aa5.48□□□□□ -1.53
SWD3YBR175W GRE2Q12068 342 aaKnown RBP5.48□□□□□ -1.53
SWD3YBR175W MAK11P20484 414 aaKnown RBP5.47□□□□□ -1.53
SWD3YBR175W RAM2P29703 316 aa5.47□□□□□ -1.53
SWD3YBR175W EDS1P38073 919 aa5.46□□□□□ -1.54
SWD3YBR175W PTC3P34221 468 aaKnown RBP5.45□□□□□ -1.54
SWD3YBR175W GUT1P32190 709 aa5.44□□□□□ -1.54
SWD3YBR175W MIF2P35201 549 aa5.44□□□□□ -1.54
SWD3YBR175W NST1P53935 1240 aa5.43□□□□□ -1.54
SWD3YBR175W PML39Q03760 334 aa5.43□□□□□ -1.54
SWD3YBR175W ATH1P48016 1211 aa5.42□□□□□ -1.54
SWD3YBR175W YDR344CQ05510 147 aa5.42□□□□□ -1.54
SWD3YBR175W DMA1P38823 416 aa5.41□□□□□ -1.54
SWD3YBR175W COQ8P27697 501 aa5.4□□□□□ -1.54
SWD3YBR175W SOL3P38858 249 aa5.4□□□□□ -1.54
SWD3YBR175W VRP1P37370 817 aa5.37□□□□□ -1.55
SWD3YBR175W XDJ1P39102 459 aa5.37□□□□□ -1.55
SWD3YBR175W ARH1P48360 493 aa5.37□□□□□ -1.55
SWD3YBR175W MPH3P0CE00 602 aa5.36□□□□□ -1.55
SWD3YBR175W MID1P41821 548 aa5.36□□□□□ -1.55
SWD3YBR175W ELP4Q02884 456 aaKnown RBP5.36□□□□□ -1.55
SWD3YBR175W AI4P03878 556 aa5.35□□□□□ -1.55
SWD3YBR175W NOP53Q12080 455 aaKnown RBP5.34□□□□□ -1.55
SWD3YBR175W ILV3P39522 585 aaKnown RBP5.32□□□□□ -1.56
SWD3YBR175W SPT23P35210 1082 aa5.3□□□□□ -1.56
SWD3YBR175W YGR273CP53329 174 aa5.29□□□□□ -1.56
SWD3YBR175W PEX29Q03370 554 aa5.28□□□□□ -1.56
SWD3YBR175W HAP5Q02516 242 aa5.27□□□□□ -1.57
SWD3YBR175W BNI4P53858 892 aa5.25□□□□□ -1.57
SWD3YBR175W YML082WQ04533 649 aaKnown RBP5.25□□□□□ -1.57
SWD3YBR175W MPC54Q08550 464 aa5.24□□□□□ -1.57
SWD3YBR175W DPS1P04802 557 aaKnown RBP5.23□□□□□ -1.57
SWD3YBR175W SLI15P38283 698 aa5.21□□□□□ -1.58
SWD3YBR175W LEO1P38439 464 aa5.21□□□□□ -1.58
SWD3YBR175W NMA111P53920 997 aa5.21□□□□□ -1.58
SWD3YBR175W PTC2P39966 464 aaKnown RBP5.2□□□□□ -1.58
SWD3YBR175W DPL1Q05567 589 aa5.18□□□□□ -1.58
SWD3YBR175W KEX1P09620 729 aa5.16□□□□□ -1.58
SWD3YBR175W RAM1P22007 431 aa5.14□□□□□ -1.59
SWD3YBR175W SRC1Q03707 834 aa5.14□□□□□ -1.59
SWD3YBR175W ISU2Q12056 156 aa5.14□□□□□ -1.59
SWD3YBR175W UBP14P38237 781 aaKnown RBP5.13□□□□□ -1.59
SWD3YBR175W SET1P38827 1080 aaKnown RBP5.13□□□□□ -1.59
SWD3YBR175W YPR015CQ12531 247 aa5.13□□□□□ -1.59
SWD3YBR175W YLR326WQ06170 240 aaKnown RBP5.11□□□□□ -1.59
SWD3YBR175W CDC73Q06697 393 aa5.11□□□□□ -1.59
SWD3YBR175W RAS1P01119 309 aa5.08□□□□□ -1.6
SWD3YBR175W PCS60P38137 543 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6 RIP-Chip
SWD3YBR175W VHR2P40041 505 aa5.07□□□□□ -1.6
SWD3YBR175W PDR1P12383 1068 aa5.05□□□□□ -1.6
SWD3YBR175W IFH1P39520 1085 aa5.05□□□□□ -1.6
SWD3YBR175W RAD54P32863 898 aa5.04□□□□□ -1.6
SWD3YBR175W GYP1Q08484 637 aa5.03□□□□□ -1.6
SWD3YBR175W SDH2P21801 266 aa5.02□□□□□ -1.61
SWD3YBR175W AMS1P22855 1083 aa5.02□□□□□ -1.61
SWD3YBR175W YDR090CQ03193 310 aa5.02□□□□□ -1.61
SWD3YBR175W SAS4Q04003 481 aa5.02□□□□□ -1.61
SWD3YBR175W RPP1BP10622 106 aaKnown RBP5.01□□□□□ -1.61
SWD3YBR175W YPR148CQ06523 435 aa5□□□□□ -1.61
SWD3YBR175W LEU3P08638 886 aa4.98□□□□□ -1.61
SWD3YBR175W GAP1P19145 602 aaPredicted RBP4.98□□□□□ -1.61
SWD3YBR175W SAS10Q12136 610 aaPredicted RBP4.98□□□□□ -1.61
SWD3YBR175W BUD20Q08004 166 aaPredicted RBP4.97□□□□□ -1.61
SWD3YBR175W TRK1P12685 1235 aa4.96□□□□□ -1.62
SWD3YBR175W RGA1P39083 1007 aa4.96□□□□□ -1.62
SWD3YBR175W RGA2Q06407 1009 aa4.96□□□□□ -1.62
SWD3YBR175W YRR1Q12172 810 aa4.95□□□□□ -1.62
SWD3YBR175W KIC1P38692 1080 aa4.94□□□□□ -1.62
SWD3YBR175W REF2P42073 533 aaPredicted RBP4.94□□□□□ -1.62
SWD3YBR175W CSC1Q06538 782 aa4.94□□□□□ -1.62
SWD3YBR175W TFB4Q12004 338 aa4.94□□□□□ -1.62
SWD3YBR175W PRT1P06103 763 aaKnown RBP4.93□□□□□ -1.62
SWD3YBR175W MRF1P30775 413 aaPredicted RBP4.93□□□□□ -1.62
SWD3YBR175W STR2P47164 639 aa4.93□□□□□ -1.62
SWD3YBR175W ISM1P48526 1002 aa4.93□□□□□ -1.62
SWD3YBR175W PEX21P50091 288 aa4.93□□□□□ -1.62
SWD3YBR175W YEL077CQ3E7X8 1277 aa4.93□□□□□ -1.62
SWD3YBR175W CKB1P43639 278 aa4.92□□□□□ -1.62
SWD3YBR175W TUM1Q08686 304 aaKnown RBP4.91□□□□□ -1.62
SWD3YBR175W ORC6P38826 435 aa4.9□□□□□ -1.63
SWD3YBR175W VPS70P47161 811 aa4.9□□□□□ -1.63
SWD3YBR175W NUD1P32336 851 aa4.89□□□□□ -1.63
SWD3YBR175W COX6P00427 148 aa4.88□□□□□ -1.63
SWD3YBR175W MAK21Q12176 1025 aaKnown RBP4.87□□□□□ -1.63
SWD3YBR175W TY1A-DR4O74302 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-HP0C2I4 478 aaKnown RBP4.86□□□□□ -1.63
SWD3YBR175W TY1A-AP0CX57 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-PR1P0CX58 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-ORP0CX59 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-PR2P0CX60 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-DR5P0CX65 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-ER2P0CX66 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-GR3P0CX67 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-LR1P0CX68 440 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms