RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W ATH1P48016 1211 aa7.79□□□□□ -1.16
CDC28YBR160W NST1P53935 1240 aa7.79□□□□□ -1.16
CDC28YBR160W HTA1P04911 132 aaKnown RBP7.78□□□□□ -1.16
CDC28YBR160W HTA2P04912 132 aa7.78□□□□□ -1.16
CDC28YBR160W SIS1P25294 352 aaKnown RBP7.78□□□□□ -1.16
CDC28YBR160W LDB19Q12502 818 aa7.78□□□□□ -1.16
CDC28YBR160W SOL3P38858 249 aa7.77□□□□□ -1.17
CDC28YBR160W FKH1P40466 484 aa7.77□□□□□ -1.17
CDC28YBR160W IFH1P39520 1085 aa7.75□□□□□ -1.17
CDC28YBR160W SAS10Q12136 610 aaPredicted RBP7.75□□□□□ -1.17
CDC28YBR160W DAN4P47179 1161 aa7.73□□□□□ -1.17
CDC28YBR160W YEL023CP39992 682 aa7.72□□□□□ -1.17
CDC28YBR160W YNL035CP53962 389 aaKnown RBP7.72□□□□□ -1.17
CDC28YBR160W JIP4Q03361 876 aa7.71□□□□□ -1.18
CDC28YBR160W AIR2Q12476 344 aaKnown RBP7.71□□□□□ -1.18
CDC28YBR160W RTG1P32607 177 aa7.7□□□□□ -1.18
CDC28YBR160W YGR273CP53329 174 aa7.7□□□□□ -1.18
CDC28YBR160W PTC4P38089 393 aa7.68□□□□□ -1.18
CDC28YBR160W SEC61P32915 480 aa7.67□□□□□ -1.18
CDC28YBR160W ILV3P39522 585 aaKnown RBP7.67□□□□□ -1.18
CDC28YBR160W AI4P03878 556 aa7.65□□□□□ -1.18
CDC28YBR160W MPH3P0CE00 602 aa7.65□□□□□ -1.18
CDC28YBR160W VPS70P47161 811 aa7.65□□□□□ -1.18
CDC28YBR160W UBP14P38237 781 aaKnown RBP7.61□□□□□ -1.19
CDC28YBR160W YLR326WQ06170 240 aaKnown RBP7.61□□□□□ -1.19
CDC28YBR160W NCR1Q12200 1170 aa7.61□□□□□ -1.19
CDC28YBR160W KEX1P09620 729 aa7.59□□□□□ -1.19
CDC28YBR160W REF2P42073 533 aaPredicted RBP7.58□□□□□ -1.2
CDC28YBR160W VHR2P40041 505 aa7.57□□□□□ -1.2
CDC28YBR160W CKB1P43639 278 aa7.57□□□□□ -1.2
CDC28YBR160W YDR090CQ03193 310 aa7.56□□□□□ -1.2
CDC28YBR160W YDL129WQ07555 291 aa7.56□□□□□ -1.2
CDC28YBR160W TCB3Q03640 1545 aaKnown RBP7.53□□□□□ -1.2
CDC28YBR160W PML39Q03760 334 aa7.53□□□□□ -1.2
CDC28YBR160W PCS60P38137 543 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21 RIP-Chip
CDC28YBR160W TFG1P41895 735 aaPredicted RBP7.52□□□□□ -1.21
CDC28YBR160W BMT6Q12291 365 aa7.52□□□□□ -1.21
CDC28YBR160W SLI15P38283 698 aa7.51□□□□□ -1.21
CDC28YBR160W MID1P41821 548 aa7.5□□□□□ -1.21
CDC28YBR160W YJL171CP46992 396 aa7.5□□□□□ -1.21
CDC28YBR160W MAK21Q12176 1025 aaKnown RBP7.5□□□□□ -1.21
CDC28YBR160W RAD54P32863 898 aa7.49□□□□□ -1.21
CDC28YBR160W SAP30P38429 201 aa7.49□□□□□ -1.21
CDC28YBR160W PBS2P08018 668 aa7.48□□□□□ -1.21
CDC28YBR160W TAF7Q05021 590 aa7.48□□□□□ -1.21
CDC28YBR160W COX6P00427 148 aa7.47□□□□□ -1.21
CDC28YBR160W DSF2P38213 736 aa7.47□□□□□ -1.21
CDC28YBR160W YDR344CQ05510 147 aa7.46□□□□□ -1.22
CDC28YBR160W SKI3P17883 1432 aaKnown RBP7.44□□□□□ -1.22
CDC28YBR160W MPC54Q08550 464 aa7.44□□□□□ -1.22
CDC28YBR160W ARH1P48360 493 aa7.41□□□□□ -1.22
CDC28YBR160W CDC73Q06697 393 aa7.41□□□□□ -1.22
CDC28YBR160W GAP1P19145 602 aaPredicted RBP7.4□□□□□ -1.22
CDC28YBR160W KIC1P38692 1080 aa7.4□□□□□ -1.22
CDC28YBR160W ORC6P38826 435 aa7.4□□□□□ -1.22
CDC28YBR160W PEX29Q03370 554 aa7.4□□□□□ -1.22
CDC28YBR160W TY1B-DR4Q07793 1604 aa7.4□□□□□ -1.22
CDC28YBR160W LEO1P38439 464 aa7.39□□□□□ -1.23
CDC28YBR160W DPL1Q05567 589 aa7.39□□□□□ -1.23
CDC28YBR160W PRE3P38624 215 aa7.38□□□□□ -1.23
CDC28YBR160W MAM3Q12296 706 aa7.38□□□□□ -1.23
CDC28YBR160W SPB4P25808 606 aaPredicted RBP7.36□□□□□ -1.23
CDC28YBR160W CHL1P22516 861 aaPredicted RBP7.35□□□□□ -1.23
CDC28YBR160W IES2P40154 320 aa7.35□□□□□ -1.23
CDC28YBR160W NUP42P49686 430 aaKnown RBP7.35□□□□□ -1.23
CDC28YBR160W HAP5Q02516 242 aa7.35□□□□□ -1.23
CDC28YBR160W NMA111P53920 997 aa7.34□□□□□ -1.23
CDC28YBR160W ELP4Q02884 456 aaKnown RBP7.33□□□□□ -1.24
CDC28YBR160W HSL1P34244 1518 aa7.32□□□□□ -1.24
CDC28YBR160W ISU2Q12056 156 aa7.32□□□□□ -1.24
CDC28YBR160W LEU3P08638 886 aa7.31□□□□□ -1.24
CDC28YBR160W RPP1BP10622 106 aaKnown RBP7.31□□□□□ -1.24
CDC28YBR160W BNI4P53858 892 aa7.31□□□□□ -1.24
CDC28YBR160W CSC1Q06538 782 aa7.31□□□□□ -1.24
CDC28YBR160W PSE1P32337 1089 aaKnown RBP7.29□□□□□ -1.24
CDC28YBR160W SPT23P35210 1082 aa7.29□□□□□ -1.24
CDC28YBR160W TFB4Q12004 338 aa7.29□□□□□ -1.24
CDC28YBR160W CHD1P32657 1468 aa7.28□□□□□ -1.24
CDC28YBR160W RGR1P19263 1082 aa7.27□□□□□ -1.25
CDC28YBR160W DIT2P21595 489 aa7.27□□□□□ -1.25
CDC28YBR160W MVP1P40959 511 aaKnown RBP7.27□□□□□ -1.25
CDC28YBR160W SPT6P23615 1451 aaKnown RBP7.27□□□□□ -1.25
CDC28YBR160W RAM1P22007 431 aa7.26□□□□□ -1.25
CDC28YBR160W YNR021WP53723 404 aaKnown RBP7.23□□□□□ -1.25
CDC28YBR160W YML082WQ04533 649 aaKnown RBP7.23□□□□□ -1.25
CDC28YBR160W YPR015CQ12531 247 aa7.23□□□□□ -1.25
CDC28YBR160W PDR1P12383 1068 aa7.22□□□□□ -1.25
CDC28YBR160W PTC2P39966 464 aaKnown RBP7.22□□□□□ -1.25
CDC28YBR160W PEX21P50091 288 aa7.21□□□□□ -1.26
CDC28YBR160W YRR1Q12172 810 aa7.21□□□□□ -1.26
CDC28YBR160W TUM1Q08686 304 aaKnown RBP7.2□□□□□ -1.26
CDC28YBR160W HIR3P47171 1648 aa7.19□□□□□ -1.26
CDC28YBR160W MMS22Q06164 1454 aa7.19□□□□□ -1.26
CDC28YBR160W BCK2P33306 851 aa7.19□□□□□ -1.26
CDC28YBR160W YPR109WQ06104 294 aa7.19□□□□□ -1.26
CDC28YBR160W XRN1P22147 1528 aaKnown RBP7.18□□□□□ -1.26
CDC28YBR160W SIN3P22579 1536 aa7.17□□□□□ -1.26
CDC28YBR160W CLB5P30283 435 aa7.17□□□□□ -1.26
CDC28YBR160W GLC3P32775 704 aa7.16□□□□□ -1.26
CDC28YBR160W NUD1P32336 851 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms