RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeastyeast

Gene CMD1, Length 444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMD1YBR109C PTC4P38089 393 aa8.24□□□□□ -1.09
CMD1YBR109C GYP5Q12344 894 aa8.22□□□□□ -1.09
CMD1YBR109C YEL023CP39992 682 aa8.2□□□□□ -1.1
CMD1YBR109C RTG3P38165 486 aa8.19□□□□□ -1.1
CMD1YBR109C YDR344CQ05510 147 aa8.17□□□□□ -1.1
CMD1YBR109C DCW1P36091 449 aa8.15□□□□□ -1.1
CMD1YBR109C SRC1Q03707 834 aa8.15□□□□□ -1.1
CMD1YBR109C ELP4Q02884 456 aaKnown RBP8.14□□□□□ -1.11
CMD1YBR109C PML39Q03760 334 aa8.06□□□□□ -1.12
CMD1YBR109C ARH1P48360 493 aa8.03□□□□□ -1.12
CMD1YBR109C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
CMD1YBR109C CST9Q06032 482 aa8.01□□□□□ -1.13
CMD1YBR109C RCR1P38212 213 aa7.96□□□□□ -1.14
CMD1YBR109C SPT23P35210 1082 aa7.95□□□□□ -1.14
CMD1YBR109C SSP1P38871 571 aa7.9□□□□□ -1.14
CMD1YBR109C MGA2P40578 1113 aa7.9□□□□□ -1.14
CMD1YBR109C GRE2Q12068 342 aaKnown RBP7.89□□□□□ -1.15
CMD1YBR109C MID1P41821 548 aa7.87□□□□□ -1.15
CMD1YBR109C YML082WQ04533 649 aaKnown RBP7.82□□□□□ -1.16
CMD1YBR109C BNI4P53858 892 aa7.81□□□□□ -1.16
CMD1YBR109C HAP5Q02516 242 aa7.81□□□□□ -1.16
CMD1YBR109C PEX29Q03370 554 aa7.81□□□□□ -1.16
CMD1YBR109C NST1P53935 1240 aa7.78□□□□□ -1.16
CMD1YBR109C PTC2P39966 464 aaKnown RBP7.77□□□□□ -1.17
CMD1YBR109C GUT1P32190 709 aa7.76□□□□□ -1.17
CMD1YBR109C RAS1P01119 309 aa7.75□□□□□ -1.17
CMD1YBR109C ATH1P48016 1211 aa7.75□□□□□ -1.17
CMD1YBR109C AI4P03878 556 aa7.69□□□□□ -1.18
CMD1YBR109C TRK1P12685 1235 aa7.69□□□□□ -1.18
CMD1YBR109C MPH3P0CE00 602 aa7.68□□□□□ -1.18
CMD1YBR109C PTC3P34221 468 aaKnown RBP7.67□□□□□ -1.18
CMD1YBR109C YPL062WQ02781 134 aa7.67□□□□□ -1.18
CMD1YBR109C SOL3P38858 249 aa7.65□□□□□ -1.18
CMD1YBR109C MIF2P35201 549 aa7.63□□□□□ -1.19
CMD1YBR109C EDS1P38073 919 aa7.61□□□□□ -1.19
CMD1YBR109C MPC54Q08550 464 aa7.61□□□□□ -1.19
CMD1YBR109C ILV3P39522 585 aaKnown RBP7.6□□□□□ -1.19
CMD1YBR109C AMS1P22855 1083 aa7.59□□□□□ -1.19
CMD1YBR109C MAK11P20484 414 aaKnown RBP7.55□□□□□ -1.2
CMD1YBR109C NMA111P53920 997 aa7.55□□□□□ -1.2
CMD1YBR109C YPR015CQ12531 247 aa7.54□□□□□ -1.2
CMD1YBR109C RAM1P22007 431 aa7.49□□□□□ -1.21
CMD1YBR109C DPL1Q05567 589 aa7.46□□□□□ -1.22
CMD1YBR109C GYP1Q08484 637 aa7.46□□□□□ -1.22
CMD1YBR109C SDH2P21801 266 aa7.42□□□□□ -1.22
CMD1YBR109C COQ8P27697 501 aa7.42□□□□□ -1.22
CMD1YBR109C SLI15P38283 698 aa7.42□□□□□ -1.22
CMD1YBR109C YGR273CP53329 174 aa7.42□□□□□ -1.22
CMD1YBR109C SAS4Q04003 481 aa7.4□□□□□ -1.22
CMD1YBR109C RAM2P29703 316 aa7.39□□□□□ -1.23
CMD1YBR109C YEL077CQ3E7X8 1277 aa7.38□□□□□ -1.23
CMD1YBR109C ISU2Q12056 156 aa7.37□□□□□ -1.23
CMD1YBR109C BRE2P43132 505 aa7.33□□□□□ -1.24
CMD1YBR109C GAR1P28007 205 aaKnown RBP7.32□□□□□ -1.24
CMD1YBR109C GBP2P25555 427 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
CMD1YBR109C NOP53Q12080 455 aaKnown RBP7.28□□□□□ -1.24
CMD1YBR109C GCR2Q01722 534 aa7.27□□□□□ -1.25
CMD1YBR109C MRF1P30775 413 aaPredicted RBP7.26□□□□□ -1.25
CMD1YBR109C PDR1P12383 1068 aa7.24□□□□□ -1.25
CMD1YBR109C CDC73Q06697 393 aa7.21□□□□□ -1.26
CMD1YBR109C AIR1P40507 360 aaKnown RBP7.18□□□□□ -1.26
CMD1YBR109C KEX1P09620 729 aa7.17□□□□□ -1.26
CMD1YBR109C RQC2Q12532 1038 aaKnown RBP7.17□□□□□ -1.26
CMD1YBR109C CLA4P48562 842 aa7.11□□□□□ -1.27
CMD1YBR109C ERG12P07277 443 aa7.1□□□□□ -1.27
CMD1YBR109C MET22P32179 357 aa7.1□□□□□ -1.27
CMD1YBR109C ENV9Q08651 330 aa7.1□□□□□ -1.27
CMD1YBR109C PRT1P06103 763 aaKnown RBP7.09□□□□□ -1.27
CMD1YBR109C BUD20Q08004 166 aaPredicted RBP7.09□□□□□ -1.27
CMD1YBR109C CST6P40535 587 aa7.07□□□□□ -1.28
CMD1YBR109C CDC4P07834 779 aa7.03□□□□□ -1.28
CMD1YBR109C RPP1BP10622 106 aaKnown RBP7.02□□□□□ -1.29
CMD1YBR109C LAM6Q08001 693 aa7.02□□□□□ -1.29
CMD1YBR109C YLR326WQ06170 240 aaKnown RBP7□□□□□ -1.29
CMD1YBR109C YDR444WQ04093 687 aa6.99□□□□□ -1.29
CMD1YBR109C STR2P47164 639 aa6.98□□□□□ -1.29
CMD1YBR109C YDL176WQ12027 708 aa6.97□□□□□ -1.29
CMD1YBR109C UBP14P38237 781 aaKnown RBP6.96□□□□□ -1.3
CMD1YBR109C PCS60P38137 543 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
CMD1YBR109C ISM1P48526 1002 aa6.95□□□□□ -1.3
CMD1YBR109C YRR1Q12172 810 aa6.94□□□□□ -1.3
CMD1YBR109C DMA1P38823 416 aa6.93□□□□□ -1.3
CMD1YBR109C MTC5Q03897 1148 aa6.93□□□□□ -1.3
CMD1YBR109C RAD54P32863 898 aa6.92□□□□□ -1.3
CMD1YBR109C LCB5Q06147 687 aaKnown RBP6.92□□□□□ -1.3
CMD1YBR109C FRK1Q03002 865 aaPredicted RBP6.91□□□□□ -1.3
CMD1YBR109C VHR2P40041 505 aa6.9□□□□□ -1.3
CMD1YBR109C NUD1P32336 851 aa6.88□□□□□ -1.31
CMD1YBR109C SPT16P32558 1035 aaKnown RBP6.88□□□□□ -1.31
CMD1YBR109C HED1Q03937 162 aa6.88□□□□□ -1.31
CMD1YBR109C PEX21P50091 288 aa6.87□□□□□ -1.31
CMD1YBR109C BDP1P46678 594 aa6.86□□□□□ -1.31
CMD1YBR109C TY1A-DR4O74302 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-HP0C2I4 478 aaKnown RBP6.84□□□□□ -1.31
CMD1YBR109C TY1A-AP0CX57 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-PR1P0CX58 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-ORP0CX59 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-PR2P0CX60 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-DR5P0CX65 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-ER2P0CX66 440 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms