RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 JPH4Q96JJ6 628 aa29.24■■■□□ 2.27
PHGDH-227ENST00000641811 KIAA0586Q9BVV6 1533 aa29.2■■■□□ 2.27
PHGDH-227ENST00000641811 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.26
PHGDH-227ENST00000641811 CHIC1Q5VXU3 224 aa29.19■■■□□ 2.26
PHGDH-227ENST00000641811 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
PHGDH-227ENST00000641811 PRXQ9BXM0 1461 aa29.06■■■□□ 2.24
PHGDH-227ENST00000641811 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
PHGDH-227ENST00000641811 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
PHGDH-227ENST00000641811 IQGAP2Q13576 1575 aa29.02■■■□□ 2.24
PHGDH-227ENST00000641811 EEA1Q15075 1411 aa28.98■■■□□ 2.23
PHGDH-227ENST00000641811 CARMIL2Q6F5E8 1435 aa28.88■■■□□ 2.21
PHGDH-227ENST00000641811 CTTNBP2Q8WZ74 1663 aa28.88■■■□□ 2.21
PHGDH-227ENST00000641811 TTBK1Q5TCY1 1321 aaPredicted RBP28.87■■■□□ 2.21
PHGDH-227ENST00000641811 DISP1Q96F81 1524 aa28.86■■■□□ 2.21
PHGDH-227ENST00000641811 UGGT2Q9NYU1 1516 aa28.85■■■□□ 2.21
PHGDH-227ENST00000641811 TRHP20396 242 aaPredicted RBP28.85■■■□□ 2.21
PHGDH-227ENST00000641811 PTPRGP23470 1445 aa28.82■■■□□ 2.2
PHGDH-227ENST00000641811 TNIKQ9UKE5 1360 aa28.81■■■□□ 2.2
PHGDH-227ENST00000641811 KIAA0556O60303 1618 aa28.75■■■□□ 2.19
PHGDH-227ENST00000641811 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
PHGDH-227ENST00000641811 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
PHGDH-227ENST00000641811 KIF21BO75037 1637 aa28.71■■■□□ 2.19
PHGDH-227ENST00000641811 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
PHGDH-227ENST00000641811 NPM1P06748 294 aaKnown RBP eCLIP28.67■■■□□ 2.18
PHGDH-227ENST00000641811 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
PHGDH-227ENST00000641811 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
PHGDH-227ENST00000641811 UACAQ9BZF9 1416 aa28.61■■■□□ 2.17
PHGDH-227ENST00000641811 UHRF1BP1LA0JNW5 1464 aa28.57■■■□□ 2.16
PHGDH-227ENST00000641811 ABCC2Q92887 1545 aa28.55■■■□□ 2.16
PHGDH-227ENST00000641811 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
PHGDH-227ENST00000641811 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
PHGDH-227ENST00000641811 SAMD9Q5K651 1589 aa28.53■■■□□ 2.16
PHGDH-227ENST00000641811 PLB1Q6P1J6 1458 aa28.53■■■□□ 2.16
PHGDH-227ENST00000641811 KIF13AQ9H1H9 1805 aa28.45■■■□□ 2.14
PHGDH-227ENST00000641811 ABCC10Q5T3U5 1492 aa28.45■■■□□ 2.14
PHGDH-227ENST00000641811 ABCA8O94911 1581 aa28.45■■■□□ 2.14
PHGDH-227ENST00000641811 KDM5BQ9UGL1 1544 aa28.44■■■□□ 2.14
PHGDH-227ENST00000641811 FAM69CQ0P6D2 419 aa28.44■■■□□ 2.14
PHGDH-227ENST00000641811 FHOD3Q2V2M9 1422 aa28.42■■■□□ 2.14
PHGDH-227ENST00000641811 ASXL2Q76L83 1435 aa28.41■■■□□ 2.14
PHGDH-227ENST00000641811 DIP2BQ9P265 1576 aa28.4■■■□□ 2.14
PHGDH-227ENST00000641811 ZCCHC11Q5TAX3 1644 aaKnown RBP28.4■■■□□ 2.14
PHGDH-227ENST00000641811 EFCAB5A4FU69 1503 aa28.35■■■□□ 2.13
PHGDH-227ENST00000641811 ARID3CA6NKF2 412 aa28.34■■■□□ 2.13
PHGDH-227ENST00000641811 RAPGEF6Q8TEU7 1601 aa28.28■■■□□ 2.12
PHGDH-227ENST00000641811 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
PHGDH-227ENST00000641811 ATP10BO94823 1461 aa28.25■■■□□ 2.11
PHGDH-227ENST00000641811 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
PHGDH-227ENST00000641811 WDR7Q9Y4E6 1490 aa28.22■■■□□ 2.11
PHGDH-227ENST00000641811 NUP153P49790 1475 aaKnown RBP28.2■■■□□ 2.1
PHGDH-227ENST00000641811 GLI2P10070 1586 aa28.2■■■□□ 2.1
PHGDH-227ENST00000641811 TSPOAP1O95153 1857 aa28.19■■■□□ 2.1
PHGDH-227ENST00000641811 KCNH8Q96L42 1107 aa28.18■■■□□ 2.1
PHGDH-227ENST00000641811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
PHGDH-227ENST00000641811 HNRNPUL2Q1KMD3 747 aaKnown RBP28.15■■■□□ 2.1
PHGDH-227ENST00000641811 FMN1Q68DA7 1419 aa28.1■■■□□ 2.09
PHGDH-227ENST00000641811 MAP3K4Q9Y6R4 1608 aa28.08■■■□□ 2.09
PHGDH-227ENST00000641811 ATP1B4Q9UN42 357 aaPredicted RBP28.08■■■□□ 2.09
PHGDH-227ENST00000641811 PPRC1Q5VV67 1664 aaKnown RBP28.07■■■□□ 2.08
PHGDH-227ENST00000641811 CLIP1P30622 1438 aa28.07■■■□□ 2.08
PHGDH-227ENST00000641811 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
PHGDH-227ENST00000641811 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
PHGDH-227ENST00000641811 CD109Q6YHK3 1445 aa28■■■□□ 2.07
PHGDH-227ENST00000641811 HECW1Q76N89 1606 aa27.99■■■□□ 2.07
PHGDH-227ENST00000641811 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
PHGDH-227ENST00000641811 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
PHGDH-227ENST00000641811 KDM6BO15054 1643 aa27.96■■■□□ 2.07
PHGDH-227ENST00000641811 TEX14Q8IWB6 1497 aa27.93■■■□□ 2.06
PHGDH-227ENST00000641811 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
PHGDH-227ENST00000641811 PCF11O94913 1555 aaKnown RBP27.92■■■□□ 2.06
PHGDH-227ENST00000641811 ABCA9Q8IUA7 1624 aa27.91■■■□□ 2.06
PHGDH-227ENST00000641811 MAGI3Q5TCQ9 1506 aa27.91■■■□□ 2.06
PHGDH-227ENST00000641811 CASKIN1Q8WXD9 1431 aa27.91■■■□□ 2.06
PHGDH-227ENST00000641811 LRRIQ1Q96JM4 1722 aa27.88■■■□□ 2.05
PHGDH-227ENST00000641811 COL17A1Q9UMD9 1497 aaPredicted RBP27.88■■■□□ 2.05
PHGDH-227ENST00000641811 FYCO1Q9BQS8 1478 aa27.82■■■□□ 2.04
PHGDH-227ENST00000641811 CDK11AQ9UQ88 783 aaPredicted RBP27.81■■■□□ 2.04
PHGDH-227ENST00000641811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.81■■■□□ 2.04
PHGDH-227ENST00000641811 TTC37Q6PGP7 1564 aa27.77■■■□□ 2.04
PHGDH-227ENST00000641811 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.04
PHGDH-227ENST00000641811 TROQ12816 1431 aaPredicted RBP27.75■■■□□ 2.03
PHGDH-227ENST00000641811 KIF14Q15058 1648 aa27.71■■■□□ 2.03
PHGDH-227ENST00000641811 NEO1Q92859 1461 aa27.68■■■□□ 2.02
PHGDH-227ENST00000641811 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
PHGDH-227ENST00000641811 PHLDB1Q86UU1 1377 aa27.65■■■□□ 2.02
PHGDH-227ENST00000641811 FANCAO15360 1455 aa27.64■■■□□ 2.01
PHGDH-227ENST00000641811 PLCH2O75038 1416 aa27.63■■■□□ 2.01
PHGDH-227ENST00000641811 RAPGEF3O95398 923 aa27.61■■■□□ 2.01
PHGDH-227ENST00000641811 AKNAQ7Z591 1439 aa27.6■■■□□ 2.01
PHGDH-227ENST00000641811 MYO5CQ9NQX4 1742 aa27.58■■■□□ 2.01
PHGDH-227ENST00000641811 VPS8Q8N3P4 1428 aa27.58■■■□□ 2
PHGDH-227ENST00000641811 CFAP74Q9C0B2 1584 aa27.56■■■□□ 2
PHGDH-227ENST00000641811 EFCAB2Q5VUJ9 269 aa27.54■■■□□ 2
PHGDH-227ENST00000641811 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
PHGDH-227ENST00000641811 FRMPD1Q5SYB0 1578 aa27.52■■■□□ 2
PHGDH-227ENST00000641811 DENND4BO75064 1496 aaPredicted RBP27.51■■■□□ 2
PHGDH-227ENST00000641811 ARHGAP5Q13017 1502 aa27.51■■□□□ 1.99
PHGDH-227ENST00000641811 ADGRL1O94910 1474 aa27.49■■□□□ 1.99
PHGDH-227ENST00000641811 SCAPERQ9BY12 1400 aa27.48■■□□□ 1.99
PHGDH-227ENST00000641811 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms