RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ABCC10Q5T3U5 1492 aa13.61□□□□□ -0.23
PHGDH-225ENST00000641720 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
PHGDH-225ENST00000641720 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
PHGDH-225ENST00000641720 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
PHGDH-225ENST00000641720 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-225ENST00000641720 KDM6BO15054 1643 aa13.54□□□□□ -0.24
PHGDH-225ENST00000641720 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
PHGDH-225ENST00000641720 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
PHGDH-225ENST00000641720 CUL7Q14999 1698 aa13.43□□□□□ -0.26
PHGDH-225ENST00000641720 GLI2P10070 1586 aa13.42□□□□□ -0.26
PHGDH-225ENST00000641720 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
PHGDH-225ENST00000641720 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
PHGDH-225ENST00000641720 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
PHGDH-225ENST00000641720 COL17A1Q9UMD9 1497 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-225ENST00000641720 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
PHGDH-225ENST00000641720 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-225ENST00000641720 ADGRL1O94910 1474 aa13.34□□□□□ -0.27
PHGDH-225ENST00000641720 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
PHGDH-225ENST00000641720 IGF1RP08069 1367 aa13.31□□□□□ -0.28
PHGDH-225ENST00000641720 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
PHGDH-225ENST00000641720 ZCCHC11Q5TAX3 1644 aaKnown RBP13.3□□□□□ -0.28
PHGDH-225ENST00000641720 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
PHGDH-225ENST00000641720 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
PHGDH-225ENST00000641720 DISP1Q96F81 1524 aa13.28□□□□□ -0.28
PHGDH-225ENST00000641720 KDM5BQ9UGL1 1544 aa13.27□□□□□ -0.29
PHGDH-225ENST00000641720 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
PHGDH-225ENST00000641720 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
PHGDH-225ENST00000641720 PTPRGP23470 1445 aa13.23□□□□□ -0.29
PHGDH-225ENST00000641720 SUPT5HO00267 1087 aaKnown RBP13.23□□□□□ -0.29
PHGDH-225ENST00000641720 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
PHGDH-225ENST00000641720 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
PHGDH-225ENST00000641720 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
PHGDH-225ENST00000641720 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
PHGDH-225ENST00000641720 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.3
PHGDH-225ENST00000641720 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
PHGDH-225ENST00000641720 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
PHGDH-225ENST00000641720 CTTNBP2Q8WZ74 1663 aa13.18□□□□□ -0.3
PHGDH-225ENST00000641720 KIF21BO75037 1637 aa13.18□□□□□ -0.3
PHGDH-225ENST00000641720 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
PHGDH-225ENST00000641720 CARMIL2Q6F5E8 1435 aa13.15□□□□□ -0.3
PHGDH-225ENST00000641720 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
PHGDH-225ENST00000641720 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
PHGDH-225ENST00000641720 ABCA8O94911 1581 aa13.13□□□□□ -0.31
PHGDH-225ENST00000641720 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
PHGDH-225ENST00000641720 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
PHGDH-225ENST00000641720 FRMPD1Q5SYB0 1578 aa13.06□□□□□ -0.32
PHGDH-225ENST00000641720 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
PHGDH-225ENST00000641720 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
PHGDH-225ENST00000641720 ABCA9Q8IUA7 1624 aa13.04□□□□□ -0.32
PHGDH-225ENST00000641720 RAPGEF2Q9Y4G8 1499 aa13.04□□□□□ -0.32
PHGDH-225ENST00000641720 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-225ENST00000641720 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.33
PHGDH-225ENST00000641720 MADDQ8WXG6 1647 aa13□□□□□ -0.33
PHGDH-225ENST00000641720 CD109Q6YHK3 1445 aa13□□□□□ -0.33
PHGDH-225ENST00000641720 RICTORQ6R327 1708 aa12.98□□□□□ -0.33
PHGDH-225ENST00000641720 PTPRMP28827 1452 aa12.97□□□□□ -0.33
PHGDH-225ENST00000641720 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
PHGDH-225ENST00000641720 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.34
PHGDH-225ENST00000641720 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
PHGDH-225ENST00000641720 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
PHGDH-225ENST00000641720 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
PHGDH-225ENST00000641720 ARHGEF40Q8TER5 1519 aa12.93□□□□□ -0.34
PHGDH-225ENST00000641720 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
PHGDH-225ENST00000641720 ATP10BO94823 1461 aa12.91□□□□□ -0.34
PHGDH-225ENST00000641720 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
PHGDH-225ENST00000641720 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
PHGDH-225ENST00000641720 NEO1Q92859 1461 aa12.88□□□□□ -0.35
PHGDH-225ENST00000641720 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
PHGDH-225ENST00000641720 FER1L4A9Z1Z3 1794 aa12.85□□□□□ -0.35
PHGDH-225ENST00000641720 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
PHGDH-225ENST00000641720 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
PHGDH-225ENST00000641720 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
PHGDH-225ENST00000641720 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
PHGDH-225ENST00000641720 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
PHGDH-225ENST00000641720 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
PHGDH-225ENST00000641720 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
PHGDH-225ENST00000641720 RAPGEF3O95398 923 aa12.78□□□□□ -0.36
PHGDH-225ENST00000641720 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
PHGDH-225ENST00000641720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.366e-6■■■■■ 38.2
PHGDH-225ENST00000641720 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
PHGDH-225ENST00000641720 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
PHGDH-225ENST00000641720 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
PHGDH-225ENST00000641720 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
PHGDH-225ENST00000641720 ZFYVE16Q7Z3T8 1539 aa12.73□□□□□ -0.37
PHGDH-225ENST00000641720 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
PHGDH-225ENST00000641720 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-225ENST00000641720 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
PHGDH-225ENST00000641720 FANCAO15360 1455 aa12.71□□□□□ -0.38
PHGDH-225ENST00000641720 AKNAQ7Z591 1439 aa12.71□□□□□ -0.38
PHGDH-225ENST00000641720 MYO5CQ9NQX4 1742 aa12.7□□□□□ -0.38
PHGDH-225ENST00000641720 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
PHGDH-225ENST00000641720 HSPA2P54652 639 aa12.69□□□□□ -0.38
PHGDH-225ENST00000641720 C3P01024 1663 aa12.68□□□□□ -0.38
PHGDH-225ENST00000641720 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
PHGDH-225ENST00000641720 KDM5CP41229 1560 aa12.66□□□□□ -0.38
PHGDH-225ENST00000641720 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
PHGDH-225ENST00000641720 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
PHGDH-225ENST00000641720 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
PHGDH-225ENST00000641720 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
PHGDH-225ENST00000641720 CDK13Q14004 1512 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms