RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 DIP2BQ9P265 1576 aa13.53□□□□□ -0.24
PRICKLE1-221ENST00000640946 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
PRICKLE1-221ENST00000640946 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
PRICKLE1-221ENST00000640946 MAPKBP1O60336 1514 aa13.51□□□□□ -0.25
PRICKLE1-221ENST00000640946 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
PRICKLE1-221ENST00000640946 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
PRICKLE1-221ENST00000640946 FAM69CQ0P6D2 419 aa13.48□□□□□ -0.25
PRICKLE1-221ENST00000640946 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
PRICKLE1-221ENST00000640946 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
PRICKLE1-221ENST00000640946 KDM6BO15054 1643 aa13.44□□□□□ -0.26
PRICKLE1-221ENST00000640946 IGF1RP08069 1367 aa13.44□□□□□ -0.26
PRICKLE1-221ENST00000640946 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
PRICKLE1-221ENST00000640946 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
PRICKLE1-221ENST00000640946 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
PRICKLE1-221ENST00000640946 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
PRICKLE1-221ENST00000640946 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRICKLE1-221ENST00000640946 CUL7Q14999 1698 aa13.34□□□□□ -0.27
PRICKLE1-221ENST00000640946 EEA1Q15075 1411 aa13.34□□□□□ -0.27
PRICKLE1-221ENST00000640946 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.27
PRICKLE1-221ENST00000640946 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
PRICKLE1-221ENST00000640946 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
PRICKLE1-221ENST00000640946 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
PRICKLE1-221ENST00000640946 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
PRICKLE1-221ENST00000640946 GLI2P10070 1586 aa13.28□□□□□ -0.28
PRICKLE1-221ENST00000640946 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
PRICKLE1-221ENST00000640946 PTPRGP23470 1445 aa13.27□□□□□ -0.29
PRICKLE1-221ENST00000640946 ASXL2Q76L83 1435 aa13.27□□□□□ -0.29
PRICKLE1-221ENST00000640946 RAPGEF2Q9Y4G8 1499 aa13.26□□□□□ -0.29
PRICKLE1-221ENST00000640946 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
PRICKLE1-221ENST00000640946 HECW2Q9P2P5 1572 aa13.23□□□□□ -0.29
PRICKLE1-221ENST00000640946 UHRF1BP1LA0JNW5 1464 aa13.23□□□□□ -0.29
PRICKLE1-221ENST00000640946 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
PRICKLE1-221ENST00000640946 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
PRICKLE1-221ENST00000640946 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
PRICKLE1-221ENST00000640946 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
PRICKLE1-221ENST00000640946 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
PRICKLE1-221ENST00000640946 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
PRICKLE1-221ENST00000640946 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
PRICKLE1-221ENST00000640946 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
PRICKLE1-221ENST00000640946 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
PRICKLE1-221ENST00000640946 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
PRICKLE1-221ENST00000640946 FAM9AQ8IZU1 332 aaPredicted RBP13.16□□□□□ -0.3
PRICKLE1-221ENST00000640946 KIF21BO75037 1637 aa13.16□□□□□ -0.3
PRICKLE1-221ENST00000640946 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
PRICKLE1-221ENST00000640946 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
PRICKLE1-221ENST00000640946 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
PRICKLE1-221ENST00000640946 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
PRICKLE1-221ENST00000640946 WDR7Q9Y4E6 1490 aa13.08□□□□□ -0.32
PRICKLE1-221ENST00000640946 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
PRICKLE1-221ENST00000640946 MAGI3Q5TCQ9 1506 aa13.04□□□□□ -0.32
PRICKLE1-221ENST00000640946 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
PRICKLE1-221ENST00000640946 ABCA8O94911 1581 aa13.02□□□□□ -0.33
PRICKLE1-221ENST00000640946 CD109Q6YHK3 1445 aa13.01□□□□□ -0.33
PRICKLE1-221ENST00000640946 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
PRICKLE1-221ENST00000640946 ADAMTSL3P82987 1691 aa12.97□□□□□ -0.33
PRICKLE1-221ENST00000640946 SAMD9Q5K651 1589 aa12.97□□□□□ -0.33
PRICKLE1-221ENST00000640946 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
PRICKLE1-221ENST00000640946 ARAP3Q8WWN8 1544 aa12.96□□□□□ -0.33
PRICKLE1-221ENST00000640946 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
PRICKLE1-221ENST00000640946 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
PRICKLE1-221ENST00000640946 PTPRMP28827 1452 aa12.93□□□□□ -0.34
PRICKLE1-221ENST00000640946 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
PRICKLE1-221ENST00000640946 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
PRICKLE1-221ENST00000640946 ABCA9Q8IUA7 1624 aa12.9□□□□□ -0.34
PRICKLE1-221ENST00000640946 ATP10BO94823 1461 aa12.9□□□□□ -0.34
PRICKLE1-221ENST00000640946 ARHGAP35Q9NRY4 1499 aa12.9□□□□□ -0.34
PRICKLE1-221ENST00000640946 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
PRICKLE1-221ENST00000640946 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
PRICKLE1-221ENST00000640946 LMTK3Q96Q04 1460 aa12.89□□□□□ -0.35
PRICKLE1-221ENST00000640946 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
PRICKLE1-221ENST00000640946 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
PRICKLE1-221ENST00000640946 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
PRICKLE1-221ENST00000640946 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
PRICKLE1-221ENST00000640946 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
PRICKLE1-221ENST00000640946 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
PRICKLE1-221ENST00000640946 CLIP1P30622 1438 aa12.84□□□□□ -0.35
PRICKLE1-221ENST00000640946 SIGLEC1Q9BZZ2 1709 aa12.83□□□□□ -0.36
PRICKLE1-221ENST00000640946 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
PRICKLE1-221ENST00000640946 FMN1Q68DA7 1419 aa12.82□□□□□ -0.36
PRICKLE1-221ENST00000640946 NEO1Q92859 1461 aa12.82□□□□□ -0.36
PRICKLE1-221ENST00000640946 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
PRICKLE1-221ENST00000640946 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
PRICKLE1-221ENST00000640946 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
PRICKLE1-221ENST00000640946 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
PRICKLE1-221ENST00000640946 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
PRICKLE1-221ENST00000640946 RAPGEF6Q8TEU7 1601 aa12.78□□□□□ -0.36
PRICKLE1-221ENST00000640946 NUP153P49790 1475 aaKnown RBP12.77□□□□□ -0.37
PRICKLE1-221ENST00000640946 HSPA2P54652 639 aa12.76□□□□□ -0.37
PRICKLE1-221ENST00000640946 CASKIN1Q8WXD9 1431 aa12.74□□□□□ -0.37
PRICKLE1-221ENST00000640946 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
PRICKLE1-221ENST00000640946 ARID4BQ4LE39 1312 aaPredicted RBP12.72□□□□□ -0.37
PRICKLE1-221ENST00000640946 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
PRICKLE1-221ENST00000640946 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.37
PRICKLE1-221ENST00000640946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.71□□□□□ -0.38
PRICKLE1-221ENST00000640946 AKNAQ7Z591 1439 aa12.71□□□□□ -0.38
PRICKLE1-221ENST00000640946 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
PRICKLE1-221ENST00000640946 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
PRICKLE1-221ENST00000640946 FYCO1Q9BQS8 1478 aa12.7□□□□□ -0.38
PRICKLE1-221ENST00000640946 FANCAO15360 1455 aa12.69□□□□□ -0.38
PRICKLE1-221ENST00000640946 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms