RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
SCARB2-226ENST00000640916 ABCA10Q8WWZ4 1543 aa15.35■□□□□ 0.05
SCARB2-226ENST00000640916 ABCC10Q5T3U5 1492 aa15.31■□□□□ 0.04
SCARB2-226ENST00000640916 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
SCARB2-226ENST00000640916 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
SCARB2-226ENST00000640916 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
SCARB2-226ENST00000640916 KDM6BO15054 1643 aa15.25■□□□□ 0.03
SCARB2-226ENST00000640916 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
SCARB2-226ENST00000640916 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-226ENST00000640916 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
SCARB2-226ENST00000640916 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
SCARB2-226ENST00000640916 ADCY10Q96PN6 1610 aa15.19■□□□□ 0.02
SCARB2-226ENST00000640916 JPH4Q96JJ6 628 aa15.18■□□□□ 0.02
SCARB2-226ENST00000640916 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
SCARB2-226ENST00000640916 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
SCARB2-226ENST00000640916 ADGRL1O94910 1474 aa15.11■□□□□ 0.01
SCARB2-226ENST00000640916 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
SCARB2-226ENST00000640916 HECW2Q9P2P5 1572 aa15.11■□□□□ 0.01
SCARB2-226ENST00000640916 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCARB2-226ENST00000640916 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
SCARB2-226ENST00000640916 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
SCARB2-226ENST00000640916 TOP2BQ02880 1626 aa15.05■□□□□ -0
SCARB2-226ENST00000640916 COL17A1Q9UMD9 1497 aaPredicted RBP15.02■□□□□ -0
SCARB2-226ENST00000640916 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
SCARB2-226ENST00000640916 GLI2P10070 1586 aa14.98□□□□□ -0.01
SCARB2-226ENST00000640916 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
SCARB2-226ENST00000640916 FBXO41Q8TF61 875 aa14.93□□□□□ -0.02
SCARB2-226ENST00000640916 ASXL2Q76L83 1435 aa14.92□□□□□ -0.02
SCARB2-226ENST00000640916 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
SCARB2-226ENST00000640916 MAP3K4Q9Y6R4 1608 aa14.9□□□□□ -0.02
SCARB2-226ENST00000640916 CUL7Q14999 1698 aa14.89□□□□□ -0.03
SCARB2-226ENST00000640916 PTPRGP23470 1445 aa14.89□□□□□ -0.03
SCARB2-226ENST00000640916 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
SCARB2-226ENST00000640916 EPRSP07814 1512 aaKnown RBP14.85□□□□□ -0.03
SCARB2-226ENST00000640916 UHRF1BP1LA0JNW5 1464 aa14.83□□□□□ -0.03
SCARB2-226ENST00000640916 IGF1RP08069 1367 aa14.83□□□□□ -0.04
SCARB2-226ENST00000640916 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
SCARB2-226ENST00000640916 TTBK1Q5TCY1 1321 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-226ENST00000640916 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
SCARB2-226ENST00000640916 KDM5BQ9UGL1 1544 aa14.79□□□□□ -0.04
SCARB2-226ENST00000640916 UACAQ9BZF9 1416 aa14.77□□□□□ -0.04
SCARB2-226ENST00000640916 ZCCHC11Q5TAX3 1644 aaKnown RBP14.76□□□□□ -0.05
SCARB2-226ENST00000640916 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
SCARB2-226ENST00000640916 DISP1Q96F81 1524 aa14.74□□□□□ -0.05
SCARB2-226ENST00000640916 KIF21BO75037 1637 aa14.74□□□□□ -0.05
SCARB2-226ENST00000640916 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
SCARB2-226ENST00000640916 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-226ENST00000640916 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
SCARB2-226ENST00000640916 KCNA4P22459 653 aa14.69□□□□□ -0.06
SCARB2-226ENST00000640916 LMTK3Q96Q04 1460 aa14.69□□□□□ -0.06
SCARB2-226ENST00000640916 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
SCARB2-226ENST00000640916 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
SCARB2-226ENST00000640916 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
SCARB2-226ENST00000640916 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
SCARB2-226ENST00000640916 WDR7Q9Y4E6 1490 aa14.67□□□□□ -0.06
SCARB2-226ENST00000640916 PTPRMP28827 1452 aa14.66□□□□□ -0.06
SCARB2-226ENST00000640916 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
SCARB2-226ENST00000640916 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
SCARB2-226ENST00000640916 CD109Q6YHK3 1445 aa14.64□□□□□ -0.07
SCARB2-226ENST00000640916 ILDR2Q71H61 639 aa14.63□□□□□ -0.07
SCARB2-226ENST00000640916 UGGT2Q9NYU1 1516 aa14.62□□□□□ -0.07
SCARB2-226ENST00000640916 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
SCARB2-226ENST00000640916 KIAA0556O60303 1618 aa14.6□□□□□ -0.07
SCARB2-226ENST00000640916 ARAP3Q8WWN8 1544 aa14.6□□□□□ -0.07
SCARB2-226ENST00000640916 SOCS7O14512 581 aa14.57□□□□□ -0.08
SCARB2-226ENST00000640916 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
SCARB2-226ENST00000640916 BCORL1Q5H9F3 1711 aa14.57□□□□□ -0.08
SCARB2-226ENST00000640916 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
SCARB2-226ENST00000640916 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
SCARB2-226ENST00000640916 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
SCARB2-226ENST00000640916 ABCA8O94911 1581 aa14.53□□□□□ -0.08
SCARB2-226ENST00000640916 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
SCARB2-226ENST00000640916 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
SCARB2-226ENST00000640916 HSPA2P54652 639 aa14.49□□□□□ -0.09
SCARB2-226ENST00000640916 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
SCARB2-226ENST00000640916 FRMPD1Q5SYB0 1578 aa14.48□□□□□ -0.09
SCARB2-226ENST00000640916 RIMS1Q86UR5 1692 aaKnown RBP14.47□□□□□ -0.09
SCARB2-226ENST00000640916 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
SCARB2-226ENST00000640916 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.09
SCARB2-226ENST00000640916 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
SCARB2-226ENST00000640916 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
SCARB2-226ENST00000640916 NPM3O75607 178 aaKnown RBP14.43□□□□□ -0.1
SCARB2-226ENST00000640916 CTTNBP2Q8WZ74 1663 aa14.42□□□□□ -0.1
SCARB2-226ENST00000640916 SIGLEC1Q9BZZ2 1709 aa14.41□□□□□ -0.1
SCARB2-226ENST00000640916 ATP10BO94823 1461 aa14.4□□□□□ -0.1
SCARB2-226ENST00000640916 NEO1Q92859 1461 aa14.39□□□□□ -0.11
SCARB2-226ENST00000640916 ARID4BQ4LE39 1312 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-226ENST00000640916 ARHGEF40Q8TER5 1519 aa14.38□□□□□ -0.11
SCARB2-226ENST00000640916 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
SCARB2-226ENST00000640916 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
SCARB2-226ENST00000640916 RICTORQ6R327 1708 aa14.36□□□□□ -0.11
SCARB2-226ENST00000640916 STRCQ7RTU9 1775 aa14.35□□□□□ -0.11
SCARB2-226ENST00000640916 ARID3CA6NKF2 412 aa14.34□□□□□ -0.11
SCARB2-226ENST00000640916 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-226ENST00000640916 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-226ENST00000640916 TTC37Q6PGP7 1564 aa14.3□□□□□ -0.12
SCARB2-226ENST00000640916 FER1L4A9Z1Z3 1794 aa14.3□□□□□ -0.12
SCARB2-226ENST00000640916 FHOD3Q2V2M9 1422 aa14.29□□□□□ -0.12
SCARB2-226ENST00000640916 PREX1Q8TCU6 1659 aa14.28□□□□□ -0.12
SCARB2-226ENST00000640916 ZMYM4Q5VZL5 1548 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms