RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 BIVM-ERCC5R4GMW8 1640 aa32■■■□□ 2.71
VPS72-207ENST00000640458 NPM1P06748 294 aaKnown RBP eCLIP31.98■■■□□ 2.71
VPS72-207ENST00000640458 ABCC10Q5T3U5 1492 aa31.95■■■□□ 2.7
VPS72-207ENST00000640458 MAPKBP1O60336 1514 aa31.83■■■□□ 2.69
VPS72-207ENST00000640458 DIP2BQ9P265 1576 aa31.81■■■□□ 2.68
VPS72-207ENST00000640458 RUSC2Q8N2Y8 1516 aa31.81■■■□□ 2.68
VPS72-207ENST00000640458 KDM4FA0A1W2PPD8 638 aa31.8■■■□□ 2.68
VPS72-207ENST00000640458 ADCY10Q96PN6 1610 aa31.77■■■□□ 2.68
VPS72-207ENST00000640458 KDM6BO15054 1643 aa31.75■■■□□ 2.67
VPS72-207ENST00000640458 TSPOAP1O95153 1857 aa31.69■■■□□ 2.66
VPS72-207ENST00000640458 KIAA0586Q9BVV6 1533 aa31.62■■■□□ 2.65
VPS72-207ENST00000640458 ILDR1Q86SU0 546 aaPredicted RBP31.59■■■□□ 2.65
VPS72-207ENST00000640458 TTBK1Q5TCY1 1321 aaPredicted RBP31.57■■■□□ 2.64
VPS72-207ENST00000640458 IGF1RP08069 1367 aa31.52■■■□□ 2.64
VPS72-207ENST00000640458 PTPRGP23470 1445 aa31.51■■■□□ 2.64
VPS72-207ENST00000640458 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
VPS72-207ENST00000640458 CUL7Q14999 1698 aa31.41■■■□□ 2.62
VPS72-207ENST00000640458 ABCC2Q92887 1545 aa31.39■■■□□ 2.61
VPS72-207ENST00000640458 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
VPS72-207ENST00000640458 ASXL2Q76L83 1435 aa31.38■■■□□ 2.61
VPS72-207ENST00000640458 ADGRL1O94910 1474 aa31.35■■■□□ 2.61
VPS72-207ENST00000640458 PLB1Q6P1J6 1458 aa31.35■■■□□ 2.61
VPS72-207ENST00000640458 CARMIL2Q6F5E8 1435 aa31.35■■■□□ 2.61
VPS72-207ENST00000640458 PPRC1Q5VV67 1664 aaKnown RBP31.32■■■□□ 2.6
VPS72-207ENST00000640458 GLI2P10070 1586 aa31.31■■■□□ 2.6
VPS72-207ENST00000640458 CARMIL1Q5VZK9 1371 aa31.3■■■□□ 2.6
VPS72-207ENST00000640458 COL17A1Q9UMD9 1497 aaPredicted RBP31.23■■■□□ 2.59
VPS72-207ENST00000640458 UACAQ9BZF9 1416 aa31.23■■■□□ 2.59
VPS72-207ENST00000640458 UHRF1BP1LA0JNW5 1464 aa31.22■■■□□ 2.59
VPS72-207ENST00000640458 IQGAP2Q13576 1575 aa31.2■■■□□ 2.58
VPS72-207ENST00000640458 EPRSP07814 1512 aaKnown RBP31.17■■■□□ 2.58
VPS72-207ENST00000640458 HECW2Q9P2P5 1572 aa31.13■■■□□ 2.57
VPS72-207ENST00000640458 TEX14Q8IWB6 1497 aa31.12■■■□□ 2.57
VPS72-207ENST00000640458 DISP1Q96F81 1524 aa31.12■■■□□ 2.57
VPS72-207ENST00000640458 MAP3K4Q9Y6R4 1608 aa31.11■■■□□ 2.57
VPS72-207ENST00000640458 KDM5BQ9UGL1 1544 aa31.1■■■□□ 2.57
VPS72-207ENST00000640458 ZCCHC11Q5TAX3 1644 aaKnown RBP31.04■■■□□ 2.56
VPS72-207ENST00000640458 UGGT2Q9NYU1 1516 aa30.96■■■□□ 2.55
VPS72-207ENST00000640458 WDR7Q9Y4E6 1490 aa30.94■■■□□ 2.54
VPS72-207ENST00000640458 KIAA0556O60303 1618 aa30.91■■■□□ 2.54
VPS72-207ENST00000640458 RAPGEF2Q9Y4G8 1499 aa30.9■■■□□ 2.54
VPS72-207ENST00000640458 KCNH8Q96L42 1107 aa30.89■■■□□ 2.54
VPS72-207ENST00000640458 CD109Q6YHK3 1445 aa30.86■■■□□ 2.53
VPS72-207ENST00000640458 MAGI3Q5TCQ9 1506 aa30.81■■■□□ 2.52
VPS72-207ENST00000640458 CFAP43Q8NDM7 1665 aa30.77■■■□□ 2.52
VPS72-207ENST00000640458 FBXO41Q8TF61 875 aa30.72■■■□□ 2.51
VPS72-207ENST00000640458 KIF21BO75037 1637 aa30.72■■■□□ 2.51
VPS72-207ENST00000640458 ABCA8O94911 1581 aa30.68■■■□□ 2.5
VPS72-207ENST00000640458 GOLGA3Q08378 1498 aa30.68■■■□□ 2.5
VPS72-207ENST00000640458 CTTNBP2Q8WZ74 1663 aa30.64■■■□□ 2.5
VPS72-207ENST00000640458 ARID3CA6NKF2 412 aa30.62■■■□□ 2.49
VPS72-207ENST00000640458 ARAP3Q8WWN8 1544 aa30.59■■■□□ 2.49
VPS72-207ENST00000640458 PTPRMP28827 1452 aa30.54■■■□□ 2.48
VPS72-207ENST00000640458 FAM9AQ8IZU1 332 aaPredicted RBP30.51■■■□□ 2.47
VPS72-207ENST00000640458 RAPGEF3O95398 923 aa30.5■■■□□ 2.47
VPS72-207ENST00000640458 CHIC1Q5VXU3 224 aa30.49■■■□□ 2.47
VPS72-207ENST00000640458 P3H3Q8IVL6 736 aa30.48■■■□□ 2.47
VPS72-207ENST00000640458 ADAMTSL3P82987 1691 aa30.48■■■□□ 2.47
VPS72-207ENST00000640458 ATP10BO94823 1461 aa30.47■■■□□ 2.47
VPS72-207ENST00000640458 PHLDB1Q86UU1 1377 aa30.46■■■□□ 2.47
VPS72-207ENST00000640458 PRXQ9BXM0 1461 aa30.45■■■□□ 2.47
VPS72-207ENST00000640458 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.46
VPS72-207ENST00000640458 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
VPS72-207ENST00000640458 EEA1Q15075 1411 aa30.41■■■□□ 2.46
VPS72-207ENST00000640458 ABCA9Q8IUA7 1624 aa30.4■■■□□ 2.46
VPS72-207ENST00000640458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.36■■■□□ 2.45
VPS72-207ENST00000640458 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
VPS72-207ENST00000640458 NEO1Q92859 1461 aa30.35■■■□□ 2.45
VPS72-207ENST00000640458 PCF11O94913 1555 aaKnown RBP30.35■■■□□ 2.45
VPS72-207ENST00000640458 BCORL1Q5H9F3 1711 aa30.35■■■□□ 2.45
VPS72-207ENST00000640458 MADDQ8WXG6 1647 aa30.34■■■□□ 2.45
VPS72-207ENST00000640458 LMTK3Q96Q04 1460 aa30.31■■■□□ 2.44
VPS72-207ENST00000640458 FRMPD1Q5SYB0 1578 aa30.28■■■□□ 2.44
VPS72-207ENST00000640458 PLPPR3Q6T4P5 718 aa30.26■■■□□ 2.43
VPS72-207ENST00000640458 HSPA2P54652 639 aa30.24■■■□□ 2.43
VPS72-207ENST00000640458 RIMS1Q86UR5 1692 aaKnown RBP30.23■■■□□ 2.43
VPS72-207ENST00000640458 RAPGEF6Q8TEU7 1601 aa30.22■■■□□ 2.43
VPS72-207ENST00000640458 ARHGEF40Q8TER5 1519 aa30.17■■■□□ 2.42
VPS72-207ENST00000640458 DENND4BO75064 1496 aaPredicted RBP30.17■■■□□ 2.42
VPS72-207ENST00000640458 SAMD9Q5K651 1589 aa30.15■■■□□ 2.42
VPS72-207ENST00000640458 RANGAP1P46060 587 aaPredicted RBP30.13■■■□□ 2.41
VPS72-207ENST00000640458 NUP153P49790 1475 aaKnown RBP30.12■■■□□ 2.41
VPS72-207ENST00000640458 AKNAQ7Z591 1439 aa30.12■■■□□ 2.41
VPS72-207ENST00000640458 PLEKHD1A6NEE1 506 aa30.11■■■□□ 2.41
VPS72-207ENST00000640458 CERKQ8TCT0 537 aa30.1■■■□□ 2.41
VPS72-207ENST00000640458 POGZQ7Z3K3 1410 aa30.1■■■□□ 2.41
VPS72-207ENST00000640458 RICTORQ6R327 1708 aa30.1■■■□□ 2.41
VPS72-207ENST00000640458 FHOD3Q2V2M9 1422 aa30.08■■■□□ 2.41
VPS72-207ENST00000640458 FANCAO15360 1455 aa30.07■■■□□ 2.4
VPS72-207ENST00000640458 MLECQ14165 292 aa30.07■■■□□ 2.4
VPS72-207ENST00000640458 YEATS2Q9ULM3 1422 aa30.03■■■□□ 2.4
VPS72-207ENST00000640458 CFAP74Q9C0B2 1584 aa30.01■■■□□ 2.39
VPS72-207ENST00000640458 ZFYVE16Q7Z3T8 1539 aa30.01■■■□□ 2.39
VPS72-207ENST00000640458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.98■■■□□ 2.39
VPS72-207ENST00000640458 SIGLEC1Q9BZZ2 1709 aa29.98■■■□□ 2.39
VPS72-207ENST00000640458 EFCAB5A4FU69 1503 aa29.97■■■□□ 2.39
VPS72-207ENST00000640458 ZMYM4Q5VZL5 1548 aa29.97■■■□□ 2.39
VPS72-207ENST00000640458 TTC37Q6PGP7 1564 aa29.94■■■□□ 2.38
VPS72-207ENST00000640458 MAGI2Q86UL8 1455 aa29.93■■■□□ 2.38
VPS72-207ENST00000640458 FER1L4A9Z1Z3 1794 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms