RNA–Protein interactions for RNA: ENST00000640148.1

CCNT1-206, Transcript of cyclin T1, humanhuman

TSL 5 BASIC

Gene CCNT1, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-206ENST00000640148 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
CCNT1-206ENST00000640148 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
CCNT1-206ENST00000640148 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
CCNT1-206ENST00000640148 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
CCNT1-206ENST00000640148 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
CCNT1-206ENST00000640148 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
CCNT1-206ENST00000640148 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
CCNT1-206ENST00000640148 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
CCNT1-206ENST00000640148 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
CCNT1-206ENST00000640148 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCNT1-206ENST00000640148 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
CCNT1-206ENST00000640148 NUP160Q12769 1436 aa13.19□□□□□ -0.3
CCNT1-206ENST00000640148 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
CCNT1-206ENST00000640148 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
CCNT1-206ENST00000640148 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
CCNT1-206ENST00000640148 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
CCNT1-206ENST00000640148 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
CCNT1-206ENST00000640148 KIF27Q86VH2 1401 aa13.1□□□□□ -0.31
CCNT1-206ENST00000640148 TTBK1Q5TCY1 1321 aaPredicted RBP13.1□□□□□ -0.31
CCNT1-206ENST00000640148 FAM69CQ0P6D2 419 aa13.06□□□□□ -0.32
CCNT1-206ENST00000640148 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
CCNT1-206ENST00000640148 CUL7Q14999 1698 aa13.05□□□□□ -0.32
CCNT1-206ENST00000640148 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
CCNT1-206ENST00000640148 KIAA0586Q9BVV6 1533 aa13.02□□□□□ -0.33
CCNT1-206ENST00000640148 IGF1RP08069 1367 aa13.01□□□□□ -0.33
CCNT1-206ENST00000640148 CARMIL2Q6F5E8 1435 aa13.01□□□□□ -0.33
CCNT1-206ENST00000640148 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
CCNT1-206ENST00000640148 KIF13AQ9H1H9 1805 aa12.98□□□□□ -0.33
CCNT1-206ENST00000640148 PTPRGP23470 1445 aa12.97□□□□□ -0.33
CCNT1-206ENST00000640148 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
CCNT1-206ENST00000640148 ADCY10Q96PN6 1610 aa12.95□□□□□ -0.34
CCNT1-206ENST00000640148 MAPKBP1O60336 1514 aa12.94□□□□□ -0.34
CCNT1-206ENST00000640148 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
CCNT1-206ENST00000640148 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
CCNT1-206ENST00000640148 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
CCNT1-206ENST00000640148 IQGAP2Q13576 1575 aa12.92□□□□□ -0.34
CCNT1-206ENST00000640148 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
CCNT1-206ENST00000640148 DIP2BQ9P265 1576 aa12.91□□□□□ -0.34
CCNT1-206ENST00000640148 KDM6BO15054 1643 aa12.9□□□□□ -0.34
CCNT1-206ENST00000640148 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
CCNT1-206ENST00000640148 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
CCNT1-206ENST00000640148 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
CCNT1-206ENST00000640148 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
CCNT1-206ENST00000640148 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
CCNT1-206ENST00000640148 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
CCNT1-206ENST00000640148 ASXL2Q76L83 1435 aa12.83□□□□□ -0.36
CCNT1-206ENST00000640148 UHRF1BP1LA0JNW5 1464 aa12.79□□□□□ -0.36
CCNT1-206ENST00000640148 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
CCNT1-206ENST00000640148 DISP1Q96F81 1524 aa12.78□□□□□ -0.36
CCNT1-206ENST00000640148 UGGT2Q9NYU1 1516 aa12.78□□□□□ -0.36
CCNT1-206ENST00000640148 TEX14Q8IWB6 1497 aa12.77□□□□□ -0.37
CCNT1-206ENST00000640148 KIAA0556O60303 1618 aa12.77□□□□□ -0.37
CCNT1-206ENST00000640148 CTTNBP2Q8WZ74 1663 aa12.76□□□□□ -0.37
CCNT1-206ENST00000640148 GLI2P10070 1586 aa12.75□□□□□ -0.37
CCNT1-206ENST00000640148 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
CCNT1-206ENST00000640148 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
CCNT1-206ENST00000640148 EPRSP07814 1512 aaKnown RBP12.73□□□□□ -0.37
CCNT1-206ENST00000640148 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
CCNT1-206ENST00000640148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
CCNT1-206ENST00000640148 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
CCNT1-206ENST00000640148 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
CCNT1-206ENST00000640148 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
CCNT1-206ENST00000640148 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
CCNT1-206ENST00000640148 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
CCNT1-206ENST00000640148 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
CCNT1-206ENST00000640148 MAP3K4Q9Y6R4 1608 aa12.68□□□□□ -0.38
CCNT1-206ENST00000640148 CD109Q6YHK3 1445 aa12.67□□□□□ -0.38
CCNT1-206ENST00000640148 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
CCNT1-206ENST00000640148 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
CCNT1-206ENST00000640148 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
CCNT1-206ENST00000640148 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
CCNT1-206ENST00000640148 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
CCNT1-206ENST00000640148 ABCA8O94911 1581 aa12.61□□□□□ -0.39
CCNT1-206ENST00000640148 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
CCNT1-206ENST00000640148 MAGI3Q5TCQ9 1506 aa12.58□□□□□ -0.4
CCNT1-206ENST00000640148 EEA1Q15075 1411 aa12.57□□□□□ -0.4
CCNT1-206ENST00000640148 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
CCNT1-206ENST00000640148 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
CCNT1-206ENST00000640148 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
CCNT1-206ENST00000640148 ATP1B4Q9UN42 357 aaPredicted RBP12.54□□□□□ -0.4
CCNT1-206ENST00000640148 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
CCNT1-206ENST00000640148 ATP10BO94823 1461 aa12.53□□□□□ -0.4
CCNT1-206ENST00000640148 PHLDB1Q86UU1 1377 aa12.53□□□□□ -0.4
CCNT1-206ENST00000640148 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
CCNT1-206ENST00000640148 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
CCNT1-206ENST00000640148 KIF21BO75037 1637 aa12.5□□□□□ -0.41
CCNT1-206ENST00000640148 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
CCNT1-206ENST00000640148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCNT1-206ENST00000640148 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
CCNT1-206ENST00000640148 HECW2Q9P2P5 1572 aa12.48□□□□□ -0.41
CCNT1-206ENST00000640148 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
CCNT1-206ENST00000640148 RAPGEF3O95398 923 aa12.48□□□□□ -0.41
CCNT1-206ENST00000640148 NEO1Q92859 1461 aa12.46□□□□□ -0.41
CCNT1-206ENST00000640148 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
CCNT1-206ENST00000640148 EFCAB5A4FU69 1503 aa12.45□□□□□ -0.42
CCNT1-206ENST00000640148 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
CCNT1-206ENST00000640148 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
CCNT1-206ENST00000640148 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
CCNT1-206ENST00000640148 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
CCNT1-206ENST00000640148 FANCAO15360 1455 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms