RNA–Protein interactions for RNA: ENST00000639859.1

EPM2A-223, Transcript of EPM2A, laforin glucan phosphatase, human

TSL 3

Gene EPM2A, Length 6,926 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPM2A-223	ENST00000639859	BECN1	Q14457	450 aa		11.5	□□□□□ -0.57
EPM2A-223	ENST00000639859	C14orf37	Q86TY3	774 aa		11.5	□□□□□ -0.57
EPM2A-223	ENST00000639859	CHAF1A	Q13111	956 aa	Predicted RBP	11.5	□□□□□ -0.57
EPM2A-223	ENST00000639859	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.5	□□□□□ -0.57
EPM2A-223	ENST00000639859	SALL2	Q9Y467	1007 aa	Predicted RBP	11.49	□□□□□ -0.57
EPM2A-223	ENST00000639859	GOLGA6L6	A8MZA4	724 aa		11.49	□□□□□ -0.57
EPM2A-223	ENST00000639859	DDRGK1	Q96HY6	314 aa		11.47	□□□□□ -0.57
EPM2A-223	ENST00000639859	TAOK2	Q9UL54	1235 aa		11.46	□□□□□ -0.58
EPM2A-223	ENST00000639859	NOC3L	Q8WTT2	800 aa	Known RBP	11.45	□□□□□ -0.58
EPM2A-223	ENST00000639859	MSN	P26038	577 aa	Known RBP	11.42	□□□□□ -0.58
EPM2A-223	ENST00000639859	NRDC	O43847	1150 aa		11.42	□□□□□ -0.58
EPM2A-223	ENST00000639859	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
EPM2A-223	ENST00000639859	LAS1L	Q9Y4W2	734 aa	Known RBP	11.41	□□□□□ -0.58
EPM2A-223	ENST00000639859	ARID3C	A6NKF2	412 aa		11.4	□□□□□ -0.58
EPM2A-223	ENST00000639859	IRX6	P78412	446 aa	Predicted RBP	11.39	□□□□□ -0.59
EPM2A-223	ENST00000639859	MYH16	Q9H6N6	1097 aa		11.39	□□□□□ -0.59
EPM2A-223	ENST00000639859	PNN	Q9H307	717 aa	Known RBP	11.39	□□□□□ -0.59
EPM2A-223	ENST00000639859	FAM9B	Q8IZU0	186 aa		11.39	□□□□□ -0.59
EPM2A-223	ENST00000639859	SET	Q01105	290 aa	Predicted RBP	11.38	□□□□□ -0.59
EPM2A-223	ENST00000639859		A0A0U1RQG5	324 aa	Predicted RBP	11.37	□□□□□ -0.59
EPM2A-223	ENST00000639859	PATL2	C9JE40	543 aa	Known RBP	11.37	□□□□□ -0.59
EPM2A-223	ENST00000639859	DRC7	Q8IY82	874 aa		11.36	□□□□□ -0.59
EPM2A-223	ENST00000639859	APP	P05067	770 aa		11.36	□□□□□ -0.59
EPM2A-223	ENST00000639859	L1TD1	Q5T7N2	865 aa	Known RBP	11.36	□□□□□ -0.59
EPM2A-223	ENST00000639859	GOLGA6L1	Q8N7Z2	621 aa		11.35	□□□□□ -0.59
EPM2A-223	ENST00000639859	PTMS	P20962	102 aa		11.35	□□□□□ -0.59
EPM2A-223	ENST00000639859	FBXO3	Q9UK99	471 aa		11.35	□□□□□ -0.59
EPM2A-223	ENST00000639859	PDE4C	Q08493	712 aa		11.34	□□□□□ -0.59
EPM2A-223	ENST00000639859	TAF7L	Q5H9L4	462 aa		11.34	□□□□□ -0.59
EPM2A-223	ENST00000639859	PPM1G	O15355	546 aa	Predicted RBP	11.34	□□□□□ -0.59
EPM2A-223	ENST00000639859	NPM1	P06748	294 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
EPM2A-223	ENST00000639859	ISY1	Q9ULR0	285 aa	Known RBP	11.32	□□□□□ -0.6
EPM2A-223	ENST00000639859	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.31	□□□□□ -0.6
EPM2A-223	ENST00000639859	VSIG10	Q8N0Z9	540 aa		11.3	□□□□□ -0.6
EPM2A-223	ENST00000639859	MYO15B	Q96JP2	1530 aa		11.29	□□□□□ -0.6
EPM2A-223	ENST00000639859	DEK	P35659	375 aa	Known RBP	11.29	□□□□□ -0.6
EPM2A-223	ENST00000639859	KIAA2012	Q0VF49	1180 aa		11.28	□□□□□ -0.6
EPM2A-223	ENST00000639859	GOLGA2	Q08379	1002 aa		11.27	□□□□□ -0.61
EPM2A-223	ENST00000639859	CASC1	Q6TDU7	716 aa		11.25	□□□□□ -0.61
EPM2A-223	ENST00000639859	LMOD2	Q6P5Q4	547 aa		11.24	□□□□□ -0.61
EPM2A-223	ENST00000639859	MEX3C	Q5U5Q3	659 aa	Known RBP	11.24	□□□□□ -0.61
EPM2A-223	ENST00000639859	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.24	□□□□□ -0.61
EPM2A-223	ENST00000639859	GOLGA6L4	A6NEF3	574 aa		11.23	□□□□□ -0.61
EPM2A-223	ENST00000639859	WDR43	Q15061	677 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
EPM2A-223	ENST00000639859	HSP90AB1	P08238	724 aa	Known RBP	11.23	□□□□□ -0.61
EPM2A-223	ENST00000639859	NOP58	Q9Y2X3	529 aa	Known RBP	11.22	□□□□□ -0.61
EPM2A-223	ENST00000639859	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.21	□□□□□ -0.61
EPM2A-223	ENST00000639859	TMC1	Q8TDI8	760 aa		11.2	□□□□□ -0.62
EPM2A-223	ENST00000639859	FGD1	P98174	961 aa		11.19	□□□□□ -0.62
EPM2A-223	ENST00000639859	RRP12	Q5JTH9	1297 aa	Known RBP	11.19	□□□□□ -0.62
EPM2A-223	ENST00000639859	STK11IP	Q8N1F8	1099 aa		11.19	□□□□□ -0.62
EPM2A-223	ENST00000639859	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.18	□□□□□ -0.62
EPM2A-223	ENST00000639859	PPP1R15A	O75807	674 aa	Predicted RBP	11.18	□□□□□ -0.62
EPM2A-223	ENST00000639859	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.17	□□□□□ -0.62
EPM2A-223	ENST00000639859	DDX10	Q13206	875 aa	Known RBP	11.15	□□□□□ -0.62
EPM2A-223	ENST00000639859	SPRYD3	Q8NCJ5	442 aa		11.15	□□□□□ -0.62
EPM2A-223	ENST00000639859	PODXL2	Q9NZ53	605 aa		11.15	□□□□□ -0.63
EPM2A-223	ENST00000639859	USP35	Q9P2H5	1018 aa		11.13	□□□□□ -0.63
EPM2A-223	ENST00000639859	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
EPM2A-223	ENST00000639859	CNKSR2	Q8WXI2	1034 aa		11.12	□□□□□ -0.63
EPM2A-223	ENST00000639859	TRH	P20396	242 aa	Predicted RBP	11.11	□□□□□ -0.63
EPM2A-223	ENST00000639859	KCNJ4	P48050	445 aa		11.11	□□□□□ -0.63
EPM2A-223	ENST00000639859	DCAF8L1	A6NGE4	600 aa		11.1	□□□□□ -0.63
EPM2A-223	ENST00000639859	ABCC9	O60706	1549 aa		11.1	□□□□□ -0.63
EPM2A-223	ENST00000639859	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
EPM2A-223	ENST00000639859	GZF1	Q9H116	711 aa	Predicted RBP	11.1	□□□□□ -0.63
EPM2A-223	ENST00000639859	TMX4	Q9H1E5	349 aa	Predicted RBP	11.1	□□□□□ -0.63
EPM2A-223	ENST00000639859	RGS3	P49796	1198 aa		11.09	□□□□□ -0.63
EPM2A-223	ENST00000639859	MRS2	Q9HD23	443 aa		11.09	□□□□□ -0.63
EPM2A-223	ENST00000639859	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.08	□□□□□ -0.64
EPM2A-223	ENST00000639859	DCAF1	Q9Y4B6	1507 aa		11.08	□□□□□ -0.64
EPM2A-223	ENST00000639859	HSCB	Q8IWL3	235 aa		11.07	□□□□□ -0.64
EPM2A-223	ENST00000639859	PLCD4	Q9BRC7	762 aa		11.07	□□□□□ -0.64
EPM2A-223	ENST00000639859	GNL2	Q13823	731 aa	Known RBP	11.06	□□□□□ -0.64
EPM2A-223	ENST00000639859	CCDC9	Q9Y3X0	531 aa	Known RBP	11.06	□□□□□ -0.64
EPM2A-223	ENST00000639859	CEP89	Q96ST8	783 aa		11.05	□□□□□ -0.64
EPM2A-223	ENST00000639859	PHF23	Q9BUL5	403 aa	Predicted RBP	11.05	□□□□□ -0.64
EPM2A-223	ENST00000639859	SENP3-EIF4A1	A0A087X0R7	540 aa		11.04	□□□□□ -0.64
EPM2A-223	ENST00000639859	P3H3	Q8IVL6	736 aa		11.04	□□□□□ -0.64
EPM2A-223	ENST00000639859	FTSJ3	Q8IY81	847 aa	Known RBP	11.04	□□□□□ -0.64
EPM2A-223	ENST00000639859	MAP7D2	Q96T17	732 aa		11.04	□□□□□ -0.64
EPM2A-223	ENST00000639859	CREBRF	Q8IUR6	639 aa		11.03	□□□□□ -0.64
EPM2A-223	ENST00000639859	CCAR2	Q8N163	923 aa	Known RBP	11.03	□□□□□ -0.64
EPM2A-223	ENST00000639859	SCRIB	Q14160	1630 aa		11.03	□□□□□ -0.64
EPM2A-223	ENST00000639859	TIMELESS	Q9UNS1	1208 aa		11.03	□□□□□ -0.64
EPM2A-223	ENST00000639859		G3V3G9	751 aa		11.02	□□□□□ -0.65
EPM2A-223	ENST00000639859	DCAF8	Q5TAQ9	597 aa		11.02	□□□□□ -0.65
EPM2A-223	ENST00000639859	WWC1	Q8IX03	1113 aa		11.02	□□□□□ -0.65
EPM2A-223	ENST00000639859	TPM4	P67936	248 aa		11.01	□□□□□ -0.65
EPM2A-223	ENST00000639859	TPM3	P06753	285 aa		11.01	□□□□□ -0.65
EPM2A-223	ENST00000639859	OS9	Q13438	667 aa	Predicted RBP	11.01	□□□□□ -0.65
EPM2A-223	ENST00000639859	HTATSF1	O43719	755 aa	Known RBP	11	□□□□□ -0.65
EPM2A-223	ENST00000639859	RSPH6A	Q9H0K4	717 aa		11	□□□□□ -0.65
EPM2A-223	ENST00000639859	GPS2	Q13227	327 aa		10.99	□□□□□ -0.65
EPM2A-223	ENST00000639859	GOLGA6L3	A6NEY3	463 aa		10.99	□□□□□ -0.65
EPM2A-223	ENST00000639859	NOM1	Q5C9Z4	860 aa	Known RBP	10.99	□□□□□ -0.65
EPM2A-223	ENST00000639859	PKNOX2	Q96KN3	472 aa		10.99	□□□□□ -0.65
EPM2A-223	ENST00000639859	KLHL34	Q8N239	644 aa		10.99	□□□□□ -0.65
EPM2A-223	ENST00000639859	HSP90AB3P	Q58FF7	597 aa		10.98	□□□□□ -0.65
EPM2A-223	ENST00000639859	NEFH	P12036	1026 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms