RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.026e-7■■■■■ 30.6
NECAP1-219ENST00000639811 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
NECAP1-219ENST00000639811 EFCAB5A4FU69 1503 aa14.93□□□□□ -0.02
NECAP1-219ENST00000639811 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
NECAP1-219ENST00000639811 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
NECAP1-219ENST00000639811 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
NECAP1-219ENST00000639811 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
NECAP1-219ENST00000639811 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
NECAP1-219ENST00000639811 FHAD1B1AJZ9 1412 aa14.91□□□□□ -0.02
NECAP1-219ENST00000639811 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
NECAP1-219ENST00000639811 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
NECAP1-219ENST00000639811 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
NECAP1-219ENST00000639811 ADAMTS12P58397 1594 aa14.88□□□□□ -0.03
NECAP1-219ENST00000639811 THOC2Q8NI27 1593 aaKnown RBP14.87□□□□□ -0.03
NECAP1-219ENST00000639811 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
NECAP1-219ENST00000639811 SAMD9Q5K651 1589 aa14.87□□□□□ -0.03
NECAP1-219ENST00000639811 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
NECAP1-219ENST00000639811 CFAP43Q8NDM7 1665 aa14.85□□□□□ -0.03
NECAP1-219ENST00000639811 LRRC9Q6ZRR7 1453 aa14.84□□□□□ -0.03
NECAP1-219ENST00000639811 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
NECAP1-219ENST00000639811 FYCO1Q9BQS8 1478 aa14.84□□□□□ -0.03
NECAP1-219ENST00000639811 FMN1Q68DA7 1419 aa14.81□□□□□ -0.04
NECAP1-219ENST00000639811 SNAPC4Q5SXM2 1469 aa14.81□□□□□ -0.04
NECAP1-219ENST00000639811 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
NECAP1-219ENST00000639811 CCNB3Q8WWL7 1395 aa14.8□□□□□ -0.04
NECAP1-219ENST00000639811 ATP1B4Q9UN42 357 aaPredicted RBP14.8□□□□□ -0.04
NECAP1-219ENST00000639811 IQGAP2Q13576 1575 aa14.77□□□□□ -0.04
NECAP1-219ENST00000639811 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
NECAP1-219ENST00000639811 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
NECAP1-219ENST00000639811 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
NECAP1-219ENST00000639811 UGGT2Q9NYU1 1516 aa14.7□□□□□ -0.06
NECAP1-219ENST00000639811 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
NECAP1-219ENST00000639811 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
NECAP1-219ENST00000639811 ITGAEP38570 1179 aa14.68□□□□□ -0.06
NECAP1-219ENST00000639811 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
NECAP1-219ENST00000639811 DHX57Q6P158 1386 aaKnown RBP14.65□□□□□ -0.06
NECAP1-219ENST00000639811 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
NECAP1-219ENST00000639811 DISP1Q96F81 1524 aa14.64□□□□□ -0.07
NECAP1-219ENST00000639811 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
NECAP1-219ENST00000639811 KIAA0556O60303 1618 aa14.63□□□□□ -0.07
NECAP1-219ENST00000639811 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
NECAP1-219ENST00000639811 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
NECAP1-219ENST00000639811 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
NECAP1-219ENST00000639811 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
NECAP1-219ENST00000639811 CCDC18Q5T9S5 1454 aa14.61□□□□□ -0.07
NECAP1-219ENST00000639811 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
NECAP1-219ENST00000639811 FGD6Q6ZV73 1430 aa14.6□□□□□ -0.07
NECAP1-219ENST00000639811 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
NECAP1-219ENST00000639811 EPRSP07814 1512 aaKnown RBP14.6□□□□□ -0.07
NECAP1-219ENST00000639811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.6□□□□□ -0.07
NECAP1-219ENST00000639811 NUP160Q12769 1436 aa14.59□□□□□ -0.07
NECAP1-219ENST00000639811 FBLN2P98095 1184 aa14.58□□□□□ -0.07
NECAP1-219ENST00000639811 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.07
NECAP1-219ENST00000639811 RAB3GAP2Q9H2M9 1393 aa14.58□□□□□ -0.07
NECAP1-219ENST00000639811 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.08
NECAP1-219ENST00000639811 CDK13Q14004 1512 aaKnown RBP14.58□□□□□ -0.08
NECAP1-219ENST00000639811 ARHGEF11O15085 1522 aa14.57□□□□□ -0.08
NECAP1-219ENST00000639811 SETD5Q9C0A6 1442 aa14.57□□□□□ -0.08
NECAP1-219ENST00000639811 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
NECAP1-219ENST00000639811 MYOM3Q5VTT5 1437 aa14.55□□□□□ -0.08
NECAP1-219ENST00000639811 ARID3CA6NKF2 412 aa14.53□□□□□ -0.08
NECAP1-219ENST00000639811 NUP153P49790 1475 aaKnown RBP14.52□□□□□ -0.08
NECAP1-219ENST00000639811 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.08
NECAP1-219ENST00000639811 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
NECAP1-219ENST00000639811 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
NECAP1-219ENST00000639811 PTPN23Q9H3S7 1636 aa14.49□□□□□ -0.09
NECAP1-219ENST00000639811 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
NECAP1-219ENST00000639811 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
NECAP1-219ENST00000639811 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
NECAP1-219ENST00000639811 TCOF1Q13428 1488 aaKnown RBP14.47□□□□□ -0.09
NECAP1-219ENST00000639811 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
NECAP1-219ENST00000639811 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
NECAP1-219ENST00000639811 CHD1O14646 1710 aa14.43□□□□□ -0.1
NECAP1-219ENST00000639811 HFM1A2PYH4 1435 aa14.43□□□□□ -0.1
NECAP1-219ENST00000639811 MIA2Q96PC5 1412 aa14.42□□□□□ -0.1
NECAP1-219ENST00000639811 NAIPQ13075 1403 aa14.4□□□□□ -0.1
NECAP1-219ENST00000639811 ABCA8O94911 1581 aa14.4□□□□□ -0.1
NECAP1-219ENST00000639811 PRG4Q92954 1404 aaPredicted RBP14.4□□□□□ -0.1
NECAP1-219ENST00000639811 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
NECAP1-219ENST00000639811 CDK11AQ9UQ88 783 aaPredicted RBP14.39□□□□□ -0.11
NECAP1-219ENST00000639811 ADCY10Q96PN6 1610 aa14.35□□□□□ -0.11
NECAP1-219ENST00000639811 SIN3AQ96ST3 1273 aa14.34□□□□□ -0.11
NECAP1-219ENST00000639811 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
NECAP1-219ENST00000639811 KIF14Q15058 1648 aa14.34□□□□□ -0.11
NECAP1-219ENST00000639811 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
NECAP1-219ENST00000639811 ATP10BO94823 1461 aa14.34□□□□□ -0.11
NECAP1-219ENST00000639811 UACAQ9BZF9 1416 aa14.33□□□□□ -0.11
NECAP1-219ENST00000639811 RRP7BPQ9NSQ0 103 aa14.33□□□□□ -0.11
NECAP1-219ENST00000639811 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.12
NECAP1-219ENST00000639811 ZNF644Q9H582 1327 aaPredicted RBP14.33□□□□□ -0.12
NECAP1-219ENST00000639811 PTPRGP23470 1445 aa14.32□□□□□ -0.12
NECAP1-219ENST00000639811 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
NECAP1-219ENST00000639811 DAPK1P53355 1430 aa14.31□□□□□ -0.12
NECAP1-219ENST00000639811 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
NECAP1-219ENST00000639811 KDM6BO15054 1643 aa14.3□□□□□ -0.12
NECAP1-219ENST00000639811 DNMT1P26358 1616 aaKnown RBP14.3□□□□□ -0.12
NECAP1-219ENST00000639811 ABCC5O15440 1437 aa14.3□□□□□ -0.12
NECAP1-219ENST00000639811 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
NECAP1-219ENST00000639811 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
NECAP1-219ENST00000639811 ITSN2Q9NZM3 1697 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms