RNA–Protein interactions for RNA: ENST00000638999.1

KCNMA1-249, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,527 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-249ENST00000638999 APLP2Q06481 763 aa16.45■□□□□ 0.22
KCNMA1-249ENST00000638999 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
KCNMA1-249ENST00000638999 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
KCNMA1-249ENST00000638999 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
KCNMA1-249ENST00000638999 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
KCNMA1-249ENST00000638999 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
KCNMA1-249ENST00000638999 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
KCNMA1-249ENST00000638999 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
KCNMA1-249ENST00000638999 FBLN2P98095 1184 aa16.32■□□□□ 0.2
KCNMA1-249ENST00000638999 EFCAB5A4FU69 1503 aa16.31■□□□□ 0.2
KCNMA1-249ENST00000638999 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
KCNMA1-249ENST00000638999 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
KCNMA1-249ENST00000638999 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
KCNMA1-249ENST00000638999 GRIN2AQ12879 1464 aa16.27■□□□□ 0.19
KCNMA1-249ENST00000638999 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
KCNMA1-249ENST00000638999 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
KCNMA1-249ENST00000638999 SYNJ2O15056 1496 aa16.25■□□□□ 0.19
KCNMA1-249ENST00000638999 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
KCNMA1-249ENST00000638999 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
KCNMA1-249ENST00000638999 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
KCNMA1-249ENST00000638999 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
KCNMA1-249ENST00000638999 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
KCNMA1-249ENST00000638999 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
KCNMA1-249ENST00000638999 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
KCNMA1-249ENST00000638999 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
KCNMA1-249ENST00000638999 UGGT2Q9NYU1 1516 aa16.14■□□□□ 0.17
KCNMA1-249ENST00000638999 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
KCNMA1-249ENST00000638999 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
KCNMA1-249ENST00000638999 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
KCNMA1-249ENST00000638999 NUP160Q12769 1436 aa16.11■□□□□ 0.17
KCNMA1-249ENST00000638999 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
KCNMA1-249ENST00000638999 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
KCNMA1-249ENST00000638999 DISP1Q96F81 1524 aa16.08■□□□□ 0.17
KCNMA1-249ENST00000638999 CHD1O14646 1710 aa16.07■□□□□ 0.16
KCNMA1-249ENST00000638999 JPH4Q96JJ6 628 aa16.07■□□□□ 0.16
KCNMA1-249ENST00000638999 ARID3CA6NKF2 412 aa16.05■□□□□ 0.16
KCNMA1-249ENST00000638999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
KCNMA1-249ENST00000638999 LRRIQ1Q96JM4 1722 aa16.04■□□□□ 0.16
KCNMA1-249ENST00000638999 MTUS2Q5JR59 1369 aa16.03■□□□□ 0.16
KCNMA1-249ENST00000638999 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
KCNMA1-249ENST00000638999 HECW1Q76N89 1606 aa16.02■□□□□ 0.15
KCNMA1-249ENST00000638999 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
KCNMA1-249ENST00000638999 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
KCNMA1-249ENST00000638999 PHLDB1Q86UU1 1377 aa15.99■□□□□ 0.15
KCNMA1-249ENST00000638999 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
KCNMA1-249ENST00000638999 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
KCNMA1-249ENST00000638999 ITGAEP38570 1179 aa15.98■□□□□ 0.15
KCNMA1-249ENST00000638999 EPRSP07814 1512 aaKnown RBP15.97■□□□□ 0.15
KCNMA1-249ENST00000638999 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
KCNMA1-249ENST00000638999 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
KCNMA1-249ENST00000638999 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
KCNMA1-249ENST00000638999 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
KCNMA1-249ENST00000638999 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
KCNMA1-249ENST00000638999 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
KCNMA1-249ENST00000638999 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
KCNMA1-249ENST00000638999 MAGI3Q5TCQ9 1506 aa15.92■□□□□ 0.14
KCNMA1-249ENST00000638999 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
KCNMA1-249ENST00000638999 SUPT6HQ7KZ85 1726 aaKnown RBP15.9■□□□□ 0.14
KCNMA1-249ENST00000638999 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
KCNMA1-249ENST00000638999 PTPRGP23470 1445 aa15.87■□□□□ 0.13
KCNMA1-249ENST00000638999 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
KCNMA1-249ENST00000638999 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
KCNMA1-249ENST00000638999 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
KCNMA1-249ENST00000638999 MYOM3Q5VTT5 1437 aa15.84■□□□□ 0.13
KCNMA1-249ENST00000638999 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.12
KCNMA1-249ENST00000638999 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
KCNMA1-249ENST00000638999 ABCA8O94911 1581 aa15.82■□□□□ 0.12
KCNMA1-249ENST00000638999 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
KCNMA1-249ENST00000638999 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.11
KCNMA1-249ENST00000638999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.11
KCNMA1-249ENST00000638999 ATP10BO94823 1461 aa15.76■□□□□ 0.11
KCNMA1-249ENST00000638999 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
KCNMA1-249ENST00000638999 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
KCNMA1-249ENST00000638999 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
KCNMA1-249ENST00000638999 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
KCNMA1-249ENST00000638999 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
KCNMA1-249ENST00000638999 SETD5Q9C0A6 1442 aa15.71■□□□□ 0.11
KCNMA1-249ENST00000638999 KIF14Q15058 1648 aa15.71■□□□□ 0.11
KCNMA1-249ENST00000638999 MIA2Q96PC5 1412 aa15.7■□□□□ 0.1
KCNMA1-249ENST00000638999 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
KCNMA1-249ENST00000638999 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
KCNMA1-249ENST00000638999 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
KCNMA1-249ENST00000638999 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
KCNMA1-249ENST00000638999 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
KCNMA1-249ENST00000638999 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
KCNMA1-249ENST00000638999 CFDP1Q9UEE9 299 aaPredicted RBP15.67■□□□□ 0.1
KCNMA1-249ENST00000638999 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
KCNMA1-249ENST00000638999 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
KCNMA1-249ENST00000638999 ITSN2Q9NZM3 1697 aa15.64■□□□□ 0.09
KCNMA1-249ENST00000638999 GPATCH8Q9UKJ3 1502 aaKnown RBP15.64■□□□□ 0.09
KCNMA1-249ENST00000638999 RRP7BPQ9NSQ0 103 aa15.62■□□□□ 0.09
KCNMA1-249ENST00000638999 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
KCNMA1-249ENST00000638999 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
KCNMA1-249ENST00000638999 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
KCNMA1-249ENST00000638999 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
KCNMA1-249ENST00000638999 ABCC10Q5T3U5 1492 aa15.6■□□□□ 0.09
KCNMA1-249ENST00000638999 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
KCNMA1-249ENST00000638999 UHRF1BP1LA0JNW5 1464 aa15.59■□□□□ 0.09
KCNMA1-249ENST00000638999 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
KCNMA1-249ENST00000638999 DAPK1P53355 1430 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms