RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 JPH4Q96JJ6 628 aa28.37■■■□□ 2.13
COLCA2-206ENST00000638573 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
COLCA2-206ENST00000638573 CUL7Q14999 1698 aa28.28■■■□□ 2.12
COLCA2-206ENST00000638573 KIAA0586Q9BVV6 1533 aa28.23■■■□□ 2.11
COLCA2-206ENST00000638573 TTBK1Q5TCY1 1321 aaPredicted RBP28.1■■■□□ 2.09
COLCA2-206ENST00000638573 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
COLCA2-206ENST00000638573 ADCY10Q96PN6 1610 aa28.02■■■□□ 2.08
COLCA2-206ENST00000638573 IQGAP2Q13576 1575 aa28■■■□□ 2.07
COLCA2-206ENST00000638573 PTPRGP23470 1445 aa27.95■■■□□ 2.07
COLCA2-206ENST00000638573 DISP1Q96F81 1524 aa27.93■■■□□ 2.06
COLCA2-206ENST00000638573 TNIKQ9UKE5 1360 aa27.9■■■□□ 2.06
COLCA2-206ENST00000638573 CARMIL2Q6F5E8 1435 aa27.89■■■□□ 2.06
COLCA2-206ENST00000638573 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
COLCA2-206ENST00000638573 NPM1P06748 294 aaKnown RBP eCLIP27.87■■■□□ 2.05
COLCA2-206ENST00000638573 FAM69CQ0P6D2 419 aa27.85■■■□□ 2.05
COLCA2-206ENST00000638573 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
COLCA2-206ENST00000638573 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
COLCA2-206ENST00000638573 UGGT2Q9NYU1 1516 aa27.83■■■□□ 2.05
COLCA2-206ENST00000638573 ABCC10Q5T3U5 1492 aa27.83■■■□□ 2.04
COLCA2-206ENST00000638573 DIP2BQ9P265 1576 aa27.78■■■□□ 2.04
COLCA2-206ENST00000638573 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
COLCA2-206ENST00000638573 ABCC2Q92887 1545 aa27.74■■■□□ 2.03
COLCA2-206ENST00000638573 UACAQ9BZF9 1416 aa27.74■■■□□ 2.03
COLCA2-206ENST00000638573 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
COLCA2-206ENST00000638573 FAM9AQ8IZU1 332 aaPredicted RBP27.7■■■□□ 2.02
COLCA2-206ENST00000638573 CSRNP3Q8WYN3 585 aa27.69■■■□□ 2.02
COLCA2-206ENST00000638573 UHRF1BP1LA0JNW5 1464 aa27.69■■■□□ 2.02
COLCA2-206ENST00000638573 ASXL2Q76L83 1435 aa27.67■■■□□ 2.02
COLCA2-206ENST00000638573 PLB1Q6P1J6 1458 aa27.64■■■□□ 2.02
COLCA2-206ENST00000638573 P3H3Q8IVL6 736 aa27.62■■■□□ 2.01
COLCA2-206ENST00000638573 KDM5BQ9UGL1 1544 aa27.59■■■□□ 2.01
COLCA2-206ENST00000638573 TSPOAP1O95153 1857 aa27.57■■■□□ 2
COLCA2-206ENST00000638573 ZCCHC11Q5TAX3 1644 aaKnown RBP27.56■■■□□ 2
COLCA2-206ENST00000638573 GOLGA3Q08378 1498 aa27.55■■■□□ 2
COLCA2-206ENST00000638573 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
COLCA2-206ENST00000638573 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
COLCA2-206ENST00000638573 ARID3CA6NKF2 412 aa27.51■■□□□ 1.99
COLCA2-206ENST00000638573 ABCA8O94911 1581 aa27.51■■□□□ 1.99
COLCA2-206ENST00000638573 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
COLCA2-206ENST00000638573 EEA1Q15075 1411 aa27.5■■□□□ 1.99
COLCA2-206ENST00000638573 EPRSP07814 1512 aaKnown RBP27.49■■□□□ 1.99
COLCA2-206ENST00000638573 GLI2P10070 1586 aa27.45■■□□□ 1.99
COLCA2-206ENST00000638573 PPRC1Q5VV67 1664 aaKnown RBP27.45■■□□□ 1.98
COLCA2-206ENST00000638573 KDM6BO15054 1643 aa27.44■■□□□ 1.98
COLCA2-206ENST00000638573 WDR7Q9Y4E6 1490 aa27.41■■□□□ 1.98
COLCA2-206ENST00000638573 SAMD9Q5K651 1589 aa27.4■■□□□ 1.98
COLCA2-206ENST00000638573 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
COLCA2-206ENST00000638573 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
COLCA2-206ENST00000638573 KCNH8Q96L42 1107 aa27.36■■□□□ 1.97
COLCA2-206ENST00000638573 MAP3K4Q9Y6R4 1608 aa27.35■■□□□ 1.97
COLCA2-206ENST00000638573 COL17A1Q9UMD9 1497 aaPredicted RBP27.35■■□□□ 1.97
COLCA2-206ENST00000638573 KIF21BO75037 1637 aa27.33■■□□□ 1.97
COLCA2-206ENST00000638573 ATP10BO94823 1461 aa27.32■■□□□ 1.96
COLCA2-206ENST00000638573 RAPGEF6Q8TEU7 1601 aa27.23■■□□□ 1.95
COLCA2-206ENST00000638573 NUP153P49790 1475 aaKnown RBP27.22■■□□□ 1.95
COLCA2-206ENST00000638573 CD109Q6YHK3 1445 aa27.22■■□□□ 1.95
COLCA2-206ENST00000638573 UBTFP17480 764 aaKnown RBP27.2■■□□□ 1.94
COLCA2-206ENST00000638573 TEX14Q8IWB6 1497 aa27.19■■□□□ 1.94
COLCA2-206ENST00000638573 KDM4FA0A1W2PPD8 638 aa27.18■■□□□ 1.94
COLCA2-206ENST00000638573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.16■■□□□ 1.94
COLCA2-206ENST00000638573 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
COLCA2-206ENST00000638573 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
COLCA2-206ENST00000638573 CFAP43Q8NDM7 1665 aa27.12■■□□□ 1.93
COLCA2-206ENST00000638573 EFCAB5A4FU69 1503 aa27.11■■□□□ 1.93
COLCA2-206ENST00000638573 ARHGAP35Q9NRY4 1499 aa27.07■■□□□ 1.92
COLCA2-206ENST00000638573 CDK13Q14004 1512 aaKnown RBP27.04■■□□□ 1.92
COLCA2-206ENST00000638573 ABCA9Q8IUA7 1624 aa27.03■■□□□ 1.92
COLCA2-206ENST00000638573 ATP1B4Q9UN42 357 aaPredicted RBP26.98■■□□□ 1.91
COLCA2-206ENST00000638573 ADGRL1O94910 1474 aa26.97■■□□□ 1.91
COLCA2-206ENST00000638573 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
COLCA2-206ENST00000638573 RAPGEF3O95398 923 aa26.92■■□□□ 1.9
COLCA2-206ENST00000638573 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
COLCA2-206ENST00000638573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.89
COLCA2-206ENST00000638573 TTC37Q6PGP7 1564 aa26.88■■□□□ 1.89
COLCA2-206ENST00000638573 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
COLCA2-206ENST00000638573 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
COLCA2-206ENST00000638573 NEO1Q92859 1461 aa26.83■■□□□ 1.89
COLCA2-206ENST00000638573 FRMPD1Q5SYB0 1578 aa26.83■■□□□ 1.89
COLCA2-206ENST00000638573 LRRIQ1Q96JM4 1722 aa26.77■■□□□ 1.88
COLCA2-206ENST00000638573 FANCAO15360 1455 aa26.77■■□□□ 1.88
COLCA2-206ENST00000638573 PCF11O94913 1555 aaKnown RBP26.76■■□□□ 1.87
COLCA2-206ENST00000638573 AKNAQ7Z591 1439 aa26.76■■□□□ 1.87
COLCA2-206ENST00000638573 PHLDB1Q86UU1 1377 aa26.76■■□□□ 1.87
COLCA2-206ENST00000638573 KIF14Q15058 1648 aa26.74■■□□□ 1.87
COLCA2-206ENST00000638573 CLIP1P30622 1438 aa26.71■■□□□ 1.87
COLCA2-206ENST00000638573 DENND4BO75064 1496 aaPredicted RBP26.7■■□□□ 1.87
COLCA2-206ENST00000638573 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
COLCA2-206ENST00000638573 PLCH2O75038 1416 aa26.68■■□□□ 1.86
COLCA2-206ENST00000638573 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
COLCA2-206ENST00000638573 RICTORQ6R327 1708 aa26.65■■□□□ 1.86
COLCA2-206ENST00000638573 CDK11AQ9UQ88 783 aaPredicted RBP26.63■■□□□ 1.85
COLCA2-206ENST00000638573 YEATS2Q9ULM3 1422 aa26.63■■□□□ 1.85
COLCA2-206ENST00000638573 SCAPERQ9BY12 1400 aa26.62■■□□□ 1.85
COLCA2-206ENST00000638573 CFAP74Q9C0B2 1584 aa26.61■■□□□ 1.85
COLCA2-206ENST00000638573 ARHGEF40Q8TER5 1519 aa26.6■■□□□ 1.85
COLCA2-206ENST00000638573 ARID4BQ4LE39 1312 aaPredicted RBP26.58■■□□□ 1.85
COLCA2-206ENST00000638573 POGZQ7Z3K3 1410 aa26.56■■□□□ 1.84
COLCA2-206ENST00000638573 FYCO1Q9BQS8 1478 aa26.56■■□□□ 1.84
COLCA2-206ENST00000638573 CCDC18Q5T9S5 1454 aa26.55■■□□□ 1.84
COLCA2-206ENST00000638573 EFCAB2Q5VUJ9 269 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms