RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
PNKP-229ENST00000637897 AEBP2Q6ZN18 517 aaPredicted RBP13.69□□□□□ -0.22
PNKP-229ENST00000637897 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
PNKP-229ENST00000637897 CUL7Q14999 1698 aa13.67□□□□□ -0.22
PNKP-229ENST00000637897 KIAA0586Q9BVV6 1533 aa13.67□□□□□ -0.22
PNKP-229ENST00000637897 ADCY10Q96PN6 1610 aa13.59□□□□□ -0.23
PNKP-229ENST00000637897 KIF13AQ9H1H9 1805 aa13.56□□□□□ -0.24
PNKP-229ENST00000637897 DISP1Q96F81 1524 aa13.55□□□□□ -0.24
PNKP-229ENST00000637897 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
PNKP-229ENST00000637897 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
PNKP-229ENST00000637897 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
PNKP-229ENST00000637897 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
PNKP-229ENST00000637897 PTPRGP23470 1445 aa13.5□□□□□ -0.25
PNKP-229ENST00000637897 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
PNKP-229ENST00000637897 ABCC10Q5T3U5 1492 aa13.49□□□□□ -0.25
PNKP-229ENST00000637897 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
PNKP-229ENST00000637897 DIP2BQ9P265 1576 aa13.47□□□□□ -0.25
PNKP-229ENST00000637897 TTBK1Q5TCY1 1321 aaPredicted RBP13.45□□□□□ -0.26
PNKP-229ENST00000637897 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
PNKP-229ENST00000637897 FAM69CQ0P6D2 419 aa13.44□□□□□ -0.26
PNKP-229ENST00000637897 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
PNKP-229ENST00000637897 UHRF1BP1LA0JNW5 1464 aa13.43□□□□□ -0.26
PNKP-229ENST00000637897 ABCC2Q92887 1545 aa13.43□□□□□ -0.26
PNKP-229ENST00000637897 UACAQ9BZF9 1416 aa13.41□□□□□ -0.26
PNKP-229ENST00000637897 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
PNKP-229ENST00000637897 KDM5BQ9UGL1 1544 aa13.39□□□□□ -0.27
PNKP-229ENST00000637897 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
PNKP-229ENST00000637897 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
PNKP-229ENST00000637897 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
PNKP-229ENST00000637897 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
PNKP-229ENST00000637897 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
PNKP-229ENST00000637897 ABCA8O94911 1581 aa13.34□□□□□ -0.27
PNKP-229ENST00000637897 ZCCHC11Q5TAX3 1644 aaKnown RBP13.34□□□□□ -0.27
PNKP-229ENST00000637897 TSPOAP1O95153 1857 aa13.33□□□□□ -0.27
PNKP-229ENST00000637897 GLI2P10070 1586 aa13.33□□□□□ -0.28
PNKP-229ENST00000637897 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
PNKP-229ENST00000637897 COL17A1Q9UMD9 1497 aaPredicted RBP13.31□□□□□ -0.28
PNKP-229ENST00000637897 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
PNKP-229ENST00000637897 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
PNKP-229ENST00000637897 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
PNKP-229ENST00000637897 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
PNKP-229ENST00000637897 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
PNKP-229ENST00000637897 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
PNKP-229ENST00000637897 MAP3K4Q9Y6R4 1608 aa13.27□□□□□ -0.29
PNKP-229ENST00000637897 EEA1Q15075 1411 aa13.26□□□□□ -0.29
PNKP-229ENST00000637897 KDM6BO15054 1643 aa13.25□□□□□ -0.29
PNKP-229ENST00000637897 WDR7Q9Y4E6 1490 aa13.25□□□□□ -0.29
PNKP-229ENST00000637897 ATP10BO94823 1461 aa13.24□□□□□ -0.29
PNKP-229ENST00000637897 KIF21BO75037 1637 aa13.21□□□□□ -0.29
PNKP-229ENST00000637897 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
PNKP-229ENST00000637897 ARID3CA6NKF2 412 aa13.21□□□□□ -0.29
PNKP-229ENST00000637897 FHOD3Q2V2M9 1422 aa13.2□□□□□ -0.3
PNKP-229ENST00000637897 NUP153P49790 1475 aaKnown RBP13.18□□□□□ -0.3
PNKP-229ENST00000637897 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
PNKP-229ENST00000637897 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
PNKP-229ENST00000637897 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
PNKP-229ENST00000637897 RAPGEF6Q8TEU7 1601 aa13.16□□□□□ -0.3
PNKP-229ENST00000637897 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
PNKP-229ENST00000637897 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
PNKP-229ENST00000637897 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
PNKP-229ENST00000637897 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
PNKP-229ENST00000637897 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
PNKP-229ENST00000637897 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
PNKP-229ENST00000637897 EFCAB5A4FU69 1503 aa13.09□□□□□ -0.31
PNKP-229ENST00000637897 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
PNKP-229ENST00000637897 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
PNKP-229ENST00000637897 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
PNKP-229ENST00000637897 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
PNKP-229ENST00000637897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
PNKP-229ENST00000637897 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
PNKP-229ENST00000637897 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
PNKP-229ENST00000637897 TTC37Q6PGP7 1564 aa13.01□□□□□ -0.33
PNKP-229ENST00000637897 LRRIQ1Q96JM4 1722 aa13.01□□□□□ -0.33
PNKP-229ENST00000637897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
PNKP-229ENST00000637897 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
PNKP-229ENST00000637897 NEO1Q92859 1461 aa12.98□□□□□ -0.33
PNKP-229ENST00000637897 PLEKHD1A6NEE1 506 aa12.98□□□□□ -0.33
PNKP-229ENST00000637897 FMN1Q68DA7 1419 aa12.96□□□□□ -0.34
PNKP-229ENST00000637897 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
PNKP-229ENST00000637897 KIF14Q15058 1648 aa12.94□□□□□ -0.34
PNKP-229ENST00000637897 AKNAQ7Z591 1439 aa12.94□□□□□ -0.34
PNKP-229ENST00000637897 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
PNKP-229ENST00000637897 HECW1Q76N89 1606 aa12.93□□□□□ -0.34
PNKP-229ENST00000637897 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
PNKP-229ENST00000637897 FANCAO15360 1455 aa12.92□□□□□ -0.34
PNKP-229ENST00000637897 PLCH2O75038 1416 aa12.92□□□□□ -0.34
PNKP-229ENST00000637897 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
PNKP-229ENST00000637897 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
PNKP-229ENST00000637897 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
PNKP-229ENST00000637897 ATP1B4Q9UN42 357 aaPredicted RBP12.89□□□□□ -0.35
PNKP-229ENST00000637897 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
PNKP-229ENST00000637897 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
PNKP-229ENST00000637897 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
PNKP-229ENST00000637897 ZMYM4Q5VZL5 1548 aa12.87□□□□□ -0.35
PNKP-229ENST00000637897 ARHGEF40Q8TER5 1519 aa12.87□□□□□ -0.35
PNKP-229ENST00000637897 CLIP1P30622 1438 aa12.86□□□□□ -0.35
PNKP-229ENST00000637897 POGZQ7Z3K3 1410 aa12.85□□□□□ -0.35
PNKP-229ENST00000637897 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
PNKP-229ENST00000637897 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
PNKP-229ENST00000637897 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms