RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
RBMS3-220ENST00000637842 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
RBMS3-220ENST00000637842 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
RBMS3-220ENST00000637842 ADGRL1O94910 1474 aa17.16■□□□□ 0.34
RBMS3-220ENST00000637842 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
RBMS3-220ENST00000637842 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
RBMS3-220ENST00000637842 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
RBMS3-220ENST00000637842 TSPOAP1O95153 1857 aa17.06■□□□□ 0.32
RBMS3-220ENST00000637842 ADCY10Q96PN6 1610 aa17■□□□□ 0.31
RBMS3-220ENST00000637842 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
RBMS3-220ENST00000637842 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
RBMS3-220ENST00000637842 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
RBMS3-220ENST00000637842 SOCS7O14512 581 aa16.9■□□□□ 0.3
RBMS3-220ENST00000637842 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.3
RBMS3-220ENST00000637842 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
RBMS3-220ENST00000637842 GLI2P10070 1586 aa16.86■□□□□ 0.29
RBMS3-220ENST00000637842 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
RBMS3-220ENST00000637842 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
RBMS3-220ENST00000637842 PTPRGP23470 1445 aa16.85■□□□□ 0.29
RBMS3-220ENST00000637842 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
RBMS3-220ENST00000637842 PPRC1Q5VV67 1664 aaKnown RBP16.82■□□□□ 0.28
RBMS3-220ENST00000637842 TEX14Q8IWB6 1497 aa16.81■□□□□ 0.28
RBMS3-220ENST00000637842 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
RBMS3-220ENST00000637842 KIAA0586Q9BVV6 1533 aa16.8■□□□□ 0.28
RBMS3-220ENST00000637842 ILDR2Q71H61 639 aa16.8■□□□□ 0.28
RBMS3-220ENST00000637842 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
RBMS3-220ENST00000637842 DISP3Q9P2K9 1392 aa16.75■□□□□ 0.27
RBMS3-220ENST00000637842 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
RBMS3-220ENST00000637842 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
RBMS3-220ENST00000637842 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
RBMS3-220ENST00000637842 UHRF1BP1LA0JNW5 1464 aa16.69■□□□□ 0.26
RBMS3-220ENST00000637842 MAP3K4Q9Y6R4 1608 aa16.68■□□□□ 0.26
RBMS3-220ENST00000637842 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
RBMS3-220ENST00000637842 UACAQ9BZF9 1416 aa16.66■□□□□ 0.26
RBMS3-220ENST00000637842 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
RBMS3-220ENST00000637842 PTPRMP28827 1452 aa16.63■□□□□ 0.25
RBMS3-220ENST00000637842 CUL7Q14999 1698 aa16.62■□□□□ 0.25
RBMS3-220ENST00000637842 KDM5BQ9UGL1 1544 aa16.61■□□□□ 0.25
RBMS3-220ENST00000637842 IGF1RP08069 1367 aa16.58■□□□□ 0.25
RBMS3-220ENST00000637842 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
RBMS3-220ENST00000637842 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
RBMS3-220ENST00000637842 MAGI3Q5TCQ9 1506 aa16.56■□□□□ 0.24
RBMS3-220ENST00000637842 KIF21BO75037 1637 aa16.54■□□□□ 0.24
RBMS3-220ENST00000637842 WDR7Q9Y4E6 1490 aa16.52■□□□□ 0.24
RBMS3-220ENST00000637842 KCNH8Q96L42 1107 aa16.52■□□□□ 0.23
RBMS3-220ENST00000637842 HSPA2P54652 639 aa16.5■□□□□ 0.23
RBMS3-220ENST00000637842 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
RBMS3-220ENST00000637842 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
RBMS3-220ENST00000637842 ZCCHC11Q5TAX3 1644 aaKnown RBP16.49■□□□□ 0.23
RBMS3-220ENST00000637842 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
RBMS3-220ENST00000637842 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
RBMS3-220ENST00000637842 ARAP3Q8WWN8 1544 aa16.46■□□□□ 0.22
RBMS3-220ENST00000637842 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.22
RBMS3-220ENST00000637842 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
RBMS3-220ENST00000637842 IQGAP2Q13576 1575 aa16.43■□□□□ 0.22
RBMS3-220ENST00000637842 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
RBMS3-220ENST00000637842 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
RBMS3-220ENST00000637842 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
RBMS3-220ENST00000637842 RAPGEF3O95398 923 aa16.38■□□□□ 0.21
RBMS3-220ENST00000637842 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
RBMS3-220ENST00000637842 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
RBMS3-220ENST00000637842 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
RBMS3-220ENST00000637842 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
RBMS3-220ENST00000637842 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
RBMS3-220ENST00000637842 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
RBMS3-220ENST00000637842 RIMS1Q86UR5 1692 aaKnown RBP16.28■□□□□ 0.2
RBMS3-220ENST00000637842 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
RBMS3-220ENST00000637842 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
RBMS3-220ENST00000637842 YEATS2Q9ULM3 1422 aa16.26■□□□□ 0.19
RBMS3-220ENST00000637842 NEO1Q92859 1461 aa16.24■□□□□ 0.19
RBMS3-220ENST00000637842 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
RBMS3-220ENST00000637842 ABCA8O94911 1581 aa16.21■□□□□ 0.18
RBMS3-220ENST00000637842 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
RBMS3-220ENST00000637842 FANCAO15360 1455 aa16.18■□□□□ 0.18
RBMS3-220ENST00000637842 GOLGA3Q08378 1498 aa16.18■□□□□ 0.18
RBMS3-220ENST00000637842 RAPGEF2Q9Y4G8 1499 aa16.18■□□□□ 0.18
RBMS3-220ENST00000637842 MLECQ14165 292 aa16.17■□□□□ 0.18
RBMS3-220ENST00000637842 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
RBMS3-220ENST00000637842 AKNAQ7Z591 1439 aa16.16■□□□□ 0.18
RBMS3-220ENST00000637842 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
RBMS3-220ENST00000637842 FRMPD1Q5SYB0 1578 aa16.15■□□□□ 0.18
RBMS3-220ENST00000637842 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
RBMS3-220ENST00000637842 ARHGEF40Q8TER5 1519 aa16.14■□□□□ 0.17
RBMS3-220ENST00000637842 PTPRTO14522 1441 aa16.13■□□□□ 0.17
RBMS3-220ENST00000637842 ATP10BO94823 1461 aa16.13■□□□□ 0.17
RBMS3-220ENST00000637842 IQSEC2Q5JU85 1478 aa16.13■□□□□ 0.17
RBMS3-220ENST00000637842 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
RBMS3-220ENST00000637842 CEBPAP49715 358 aaPredicted RBP16.1■□□□□ 0.17
RBMS3-220ENST00000637842 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
RBMS3-220ENST00000637842 STRCQ7RTU9 1775 aa16.08■□□□□ 0.16
RBMS3-220ENST00000637842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
RBMS3-220ENST00000637842 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
RBMS3-220ENST00000637842 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
RBMS3-220ENST00000637842 UHRF1BP1Q6BDS2 1440 aa16.07■□□□□ 0.16
RBMS3-220ENST00000637842 UBAP1LF5GYI3 381 aa16.06■□□□□ 0.16
RBMS3-220ENST00000637842 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
RBMS3-220ENST00000637842 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
RBMS3-220ENST00000637842 ZFYVE16Q7Z3T8 1539 aa16.04■□□□□ 0.16
RBMS3-220ENST00000637842 EFCAB5A4FU69 1503 aa16.03■□□□□ 0.16
RBMS3-220ENST00000637842 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms