RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 DSG3P32926 999 aa22.13■■□□□ 1.13
CACNA1A-244ENST00000637625 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-244ENST00000637625 CIZ1Q9ULV3 898 aaPredicted RBP22.02■■□□□ 1.12
CACNA1A-244ENST00000637625 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
CACNA1A-244ENST00000637625 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
CACNA1A-244ENST00000637625 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-244ENST00000637625 DNAJC5Q9H3Z4 198 aa21.91■■□□□ 1.1
CACNA1A-244ENST00000637625 RNF25Q96BH1 459 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-244ENST00000637625 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
CACNA1A-244ENST00000637625 HS6ST3Q8IZP7 471 aa21.81■■□□□ 1.08
CACNA1A-244ENST00000637625 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.07
CACNA1A-244ENST00000637625 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-244ENST00000637625 WIZO95785 1651 aa21.74■■□□□ 1.07
CACNA1A-244ENST00000637625 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
CACNA1A-244ENST00000637625 NKX1-1Q15270 411 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-244ENST00000637625 PLEKHG5O94827 1062 aa21.67■■□□□ 1.06
CACNA1A-244ENST00000637625 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
CACNA1A-244ENST00000637625 NBR1Q14596 966 aa21.6■■□□□ 1.05
CACNA1A-244ENST00000637625 NUBP1P53384 320 aa21.58■■□□□ 1.05
CACNA1A-244ENST00000637625 GTPBP6O43824 516 aaPredicted RBP21.54■■□□□ 1.04
CACNA1A-244ENST00000637625 GSE1Q14687 1217 aa21.49■■□□□ 1.03
CACNA1A-244ENST00000637625 RIOK3O14730 519 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-244ENST00000637625 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
CACNA1A-244ENST00000637625 POTEDQ86YR6 584 aa21.37■■□□□ 1.01
CACNA1A-244ENST00000637625 DCAF8Q5TAQ9 597 aa21.36■■□□□ 1.01
CACNA1A-244ENST00000637625 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
CACNA1A-244ENST00000637625 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
CACNA1A-244ENST00000637625 STK25O00506 426 aa21.34■■□□□ 1.01
CACNA1A-244ENST00000637625 MNX1P50219 401 aaPredicted RBP21.32■■□□□ 1
CACNA1A-244ENST00000637625 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
CACNA1A-244ENST00000637625 TIMELESSQ9UNS1 1208 aa21.28■■□□□ 1
CACNA1A-244ENST00000637625 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
CACNA1A-244ENST00000637625 CREBZFQ9NS37 354 aa21.25■□□□□ 0.99
CACNA1A-244ENST00000637625 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-244ENST00000637625 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
CACNA1A-244ENST00000637625 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
CACNA1A-244ENST00000637625 RASEFQ8IZ41 740 aa21.2■□□□□ 0.98
CACNA1A-244ENST00000637625 FAM212AQ96EL1 285 aa21.18■□□□□ 0.98
CACNA1A-244ENST00000637625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-244ENST00000637625 ZFP91Q96JP5 570 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-244ENST00000637625 BCL11BQ9C0K0 894 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-244ENST00000637625 TULP1O00294 542 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-244ENST00000637625 CHRM1P11229 460 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-244ENST00000637625 STK24Q9Y6E0 443 aa21.12■□□□□ 0.97
CACNA1A-244ENST00000637625 SGIP1Q9BQI5 828 aa21.11■□□□□ 0.97
CACNA1A-244ENST00000637625 SPDYE1Q8NFV5 336 aaPredicted RBP21.09■□□□□ 0.97
CACNA1A-244ENST00000637625 HMGXB3Q12766 1538 aa21.06■□□□□ 0.96
CACNA1A-244ENST00000637625 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
CACNA1A-244ENST00000637625 PYGBP11216 843 aa21.04■□□□□ 0.96
CACNA1A-244ENST00000637625 CLEC11AQ9Y240 323 aa21.04■□□□□ 0.96
CACNA1A-244ENST00000637625 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
CACNA1A-244ENST00000637625 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
CACNA1A-244ENST00000637625 PRR29P0C7W0 189 aa21■□□□□ 0.95
CACNA1A-244ENST00000637625 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
CACNA1A-244ENST00000637625 AKT1S1Q96B36 256 aa20.93■□□□□ 0.94
CACNA1A-244ENST00000637625 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
CACNA1A-244ENST00000637625 KCNV2Q8TDN2 545 aa20.89■□□□□ 0.93
CACNA1A-244ENST00000637625 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-244ENST00000637625 RYDENQ9NUL5 291 aaKnown RBP20.88■□□□□ 0.93
CACNA1A-244ENST00000637625 REM2Q8IYK8 340 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-244ENST00000637625 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
CACNA1A-244ENST00000637625 TMEM132AQ24JP5 1023 aa20.81■□□□□ 0.92
CACNA1A-244ENST00000637625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.77■□□□□ 0.92
CACNA1A-244ENST00000637625 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-244ENST00000637625 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
CACNA1A-244ENST00000637625 FAM9AQ8IZU1 332 aaPredicted RBP20.69■□□□□ 0.9
CACNA1A-244ENST00000637625 PITPNM1O00562 1244 aa20.65■□□□□ 0.9
CACNA1A-244ENST00000637625 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.89
CACNA1A-244ENST00000637625 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
CACNA1A-244ENST00000637625 MFRPQ9BY79 579 aa20.63■□□□□ 0.89
CACNA1A-244ENST00000637625 CFTRP13569 1480 aa20.62■□□□□ 0.89
CACNA1A-244ENST00000637625 WDR70Q9NW82 654 aa20.62■□□□□ 0.89
CACNA1A-244ENST00000637625 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
CACNA1A-244ENST00000637625 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
CACNA1A-244ENST00000637625 PCDHB8Q9UN66 801 aa20.6■□□□□ 0.89
CACNA1A-244ENST00000637625 PCDHB13Q9Y5F0 798 aa20.6■□□□□ 0.89
CACNA1A-244ENST00000637625 TSPYL2Q9H2G4 693 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-244ENST00000637625 ZNF467Q7Z7K2 595 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-244ENST00000637625 PDAP1Q13442 181 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-244ENST00000637625 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-244ENST00000637625 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
CACNA1A-244ENST00000637625 CHADLQ6NUI6 762 aa20.54■□□□□ 0.88
CACNA1A-244ENST00000637625 PPP1R37O75864 691 aa20.52■□□□□ 0.88
CACNA1A-244ENST00000637625 NESP48681 1621 aa20.48■□□□□ 0.87
CACNA1A-244ENST00000637625 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
CACNA1A-244ENST00000637625 SOGA1O94964 1423 aa20.46■□□□□ 0.87
CACNA1A-244ENST00000637625 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
CACNA1A-244ENST00000637625 ZC3H15Q8WU90 426 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-244ENST00000637625 CUX1P39880 1505 aa20.43■□□□□ 0.86
CACNA1A-244ENST00000637625 PSEN1P49768 467 aa20.43■□□□□ 0.86
CACNA1A-244ENST00000637625 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
CACNA1A-244ENST00000637625 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
CACNA1A-244ENST00000637625 ERICH6Q7L0X2 663 aa20.41■□□□□ 0.86
CACNA1A-244ENST00000637625 ARHGEF1Q92888 912 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-244ENST00000637625 SEMA3EO15041 775 aa20.39■□□□□ 0.86
CACNA1A-244ENST00000637625 ARXQ96QS3 562 aa20.39■□□□□ 0.86
CACNA1A-244ENST00000637625 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
CACNA1A-244ENST00000637625 FBXO22Q8NEZ5 403 aa20.39■□□□□ 0.85
CACNA1A-244ENST00000637625 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
CACNA1A-244ENST00000637625 LAMC3Q9Y6N6 1575 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms