RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-242ENST00000637485 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
CACNA1A-242ENST00000637485 NOP58Q9Y2X3 529 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-242ENST00000637485 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
CACNA1A-242ENST00000637485 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-242ENST00000637485 L1TD1Q5T7N2 865 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-242ENST00000637485 TNIKQ9UKE5 1360 aa12.78□□□□□ -0.36
CACNA1A-242ENST00000637485 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
CACNA1A-242ENST00000637485 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
CACNA1A-242ENST00000637485 KIF27Q86VH2 1401 aa12.75□□□□□ -0.37
CACNA1A-242ENST00000637485 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-242ENST00000637485 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
CACNA1A-242ENST00000637485 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-242ENST00000637485 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.37
CACNA1A-242ENST00000637485 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-242ENST00000637485 LAS1LQ9Y4W2 734 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-242ENST00000637485 MIER1Q8N108 512 aa12.7□□□□□ -0.38
CACNA1A-242ENST00000637485 DDX10Q13206 875 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-242ENST00000637485 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 TSPY4P0CV99 314 aa12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 TSPY10P0CW01 314 aa12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-242ENST00000637485 CHIC2Q9UKJ5 165 aa12.67□□□□□ -0.38
CACNA1A-242ENST00000637485 GOLGA6L6A8MZA4 724 aa12.66□□□□□ -0.38
CACNA1A-242ENST00000637485 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
CACNA1A-242ENST00000637485 ZRSR1Q15695 479 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-242ENST00000637485 NRDCO43847 1150 aa12.64□□□□□ -0.39
CACNA1A-242ENST00000637485 TMC1Q8TDI8 760 aa12.63□□□□□ -0.39
CACNA1A-242ENST00000637485 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-242ENST00000637485 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
CACNA1A-242ENST00000637485 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
CACNA1A-242ENST00000637485 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-242ENST00000637485 PTMSP20962 102 aa12.61□□□□□ -0.39
CACNA1A-242ENST00000637485 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
CACNA1A-242ENST00000637485 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-242ENST00000637485 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
CACNA1A-242ENST00000637485 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.39
CACNA1A-242ENST00000637485 ARID4BQ4LE39 1312 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-242ENST00000637485 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-242ENST00000637485 RBM19Q9Y4C8 960 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-242ENST00000637485 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
CACNA1A-242ENST00000637485 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
CACNA1A-242ENST00000637485 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
CACNA1A-242ENST00000637485 CALRP27797 417 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-242ENST00000637485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
CACNA1A-242ENST00000637485 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
CACNA1A-242ENST00000637485 PLEKHD1A6NEE1 506 aa12.56□□□□□ -0.4
CACNA1A-242ENST00000637485 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-242ENST00000637485 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
CACNA1A-242ENST00000637485 RRP7BPQ9NSQ0 103 aa12.54□□□□□ -0.4
CACNA1A-242ENST00000637485 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
CACNA1A-242ENST00000637485 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
CACNA1A-242ENST00000637485 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-242ENST00000637485 SOGA1O94964 1423 aa12.51□□□□□ -0.41
CACNA1A-242ENST00000637485 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
CACNA1A-242ENST00000637485 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
CACNA1A-242ENST00000637485 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
CACNA1A-242ENST00000637485 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
CACNA1A-242ENST00000637485 CUX2O14529 1486 aa12.49□□□□□ -0.41
CACNA1A-242ENST00000637485 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-242ENST00000637485 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
CACNA1A-242ENST00000637485 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
CACNA1A-242ENST00000637485 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
CACNA1A-242ENST00000637485 HSP90AB1P08238 724 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-242ENST00000637485 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
CACNA1A-242ENST00000637485 SETQ01105 290 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-242ENST00000637485 ARID3AQ99856 593 aa12.45□□□□□ -0.42
CACNA1A-242ENST00000637485 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
CACNA1A-242ENST00000637485 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
CACNA1A-242ENST00000637485 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
CACNA1A-242ENST00000637485 HSCBQ8IWL3 235 aa12.43□□□□□ -0.42
CACNA1A-242ENST00000637485 WIZO95785 1651 aa12.43□□□□□ -0.42
CACNA1A-242ENST00000637485 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
CACNA1A-242ENST00000637485 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-242ENST00000637485 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
CACNA1A-242ENST00000637485 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
CACNA1A-242ENST00000637485 GOLGA6L1Q8N7Z2 621 aa12.41□□□□□ -0.42
CACNA1A-242ENST00000637485 DRC7Q8IY82 874 aa12.41□□□□□ -0.42
CACNA1A-242ENST00000637485 HIRIP3Q9BW71 556 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-242ENST00000637485 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
CACNA1A-242ENST00000637485 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
CACNA1A-242ENST00000637485 GBP4Q96PP9 640 aa12.39□□□□□ -0.43
CACNA1A-242ENST00000637485 APPP05067 770 aa12.39□□□□□ -0.43
CACNA1A-242ENST00000637485 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-242ENST00000637485 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
CACNA1A-242ENST00000637485 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-242ENST00000637485 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
CACNA1A-242ENST00000637485 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
CACNA1A-242ENST00000637485 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
CACNA1A-242ENST00000637485 SETD5Q9C0A6 1442 aa12.36□□□□□ -0.43
CACNA1A-242ENST00000637485 RGS3P49796 1198 aa12.36□□□□□ -0.43
CACNA1A-242ENST00000637485 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
CACNA1A-242ENST00000637485 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
CACNA1A-242ENST00000637485 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-242ENST00000637485 CARD11Q9BXL7 1154 aa12.34□□□□□ -0.43
CACNA1A-242ENST00000637485 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms