RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 KIF27Q86VH2 1401 aa31.38■■■□□ 2.61
CIITA-215ENST00000637439 IGF1RP08069 1367 aa31.35■■■□□ 2.61
CIITA-215ENST00000637439 CUL7Q14999 1698 aa31.34■■■□□ 2.61
CIITA-215ENST00000637439 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
CIITA-215ENST00000637439 KIAA0586Q9BVV6 1533 aa31.33■■■□□ 2.61
CIITA-215ENST00000637439 NPM1P06748 294 aaKnown RBP eCLIP31.31■■■□□ 2.6
CIITA-215ENST00000637439 MAPKBP1O60336 1514 aa31.22■■■□□ 2.59
CIITA-215ENST00000637439 ABCC10Q5T3U5 1492 aa31.21■■■□□ 2.59
CIITA-215ENST00000637439 ADCY10Q96PN6 1610 aa31.19■■■□□ 2.58
CIITA-215ENST00000637439 FAM69CQ0P6D2 419 aa31.18■■■□□ 2.58
CIITA-215ENST00000637439 CARMIL1Q5VZK9 1371 aa31.15■■■□□ 2.58
CIITA-215ENST00000637439 DIP2BQ9P265 1576 aa31.1■■■□□ 2.57
CIITA-215ENST00000637439 PTPRGP23470 1445 aa31.06■■■□□ 2.56
CIITA-215ENST00000637439 CARMIL2Q6F5E8 1435 aa31.06■■■□□ 2.56
CIITA-215ENST00000637439 TNIKQ9UKE5 1360 aa31■■■□□ 2.55
CIITA-215ENST00000637439 IQGAP2Q13576 1575 aa30.99■■■□□ 2.55
CIITA-215ENST00000637439 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
CIITA-215ENST00000637439 ABCC2Q92887 1545 aa30.92■■■□□ 2.54
CIITA-215ENST00000637439 KDM6BO15054 1643 aa30.89■■■□□ 2.54
CIITA-215ENST00000637439 TSPOAP1O95153 1857 aa30.87■■■□□ 2.53
CIITA-215ENST00000637439 RAPGEF2Q9Y4G8 1499 aa30.86■■■□□ 2.53
CIITA-215ENST00000637439 UHRF1BP1LA0JNW5 1464 aa30.85■■■□□ 2.53
CIITA-215ENST00000637439 PLB1Q6P1J6 1458 aa30.83■■■□□ 2.53
CIITA-215ENST00000637439 DISP1Q96F81 1524 aa30.83■■■□□ 2.53
CIITA-215ENST00000637439 UACAQ9BZF9 1416 aa30.81■■■□□ 2.52
CIITA-215ENST00000637439 ASXL2Q76L83 1435 aa30.81■■■□□ 2.52
CIITA-215ENST00000637439 UGGT2Q9NYU1 1516 aa30.79■■■□□ 2.52
CIITA-215ENST00000637439 GLI2P10070 1586 aa30.76■■■□□ 2.52
CIITA-215ENST00000637439 KIAA0556O60303 1618 aa30.7■■■□□ 2.51
CIITA-215ENST00000637439 KDM5BQ9UGL1 1544 aa30.7■■■□□ 2.51
CIITA-215ENST00000637439 PPRC1Q5VV67 1664 aaKnown RBP30.65■■■□□ 2.5
CIITA-215ENST00000637439 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
CIITA-215ENST00000637439 CTTNBP2Q8WZ74 1663 aa30.62■■■□□ 2.49
CIITA-215ENST00000637439 ZCCHC11Q5TAX3 1644 aaKnown RBP30.62■■■□□ 2.49
CIITA-215ENST00000637439 KDM4FA0A1W2PPD8 638 aa30.61■■■□□ 2.49
CIITA-215ENST00000637439 GOLGA3Q08378 1498 aa30.57■■■□□ 2.48
CIITA-215ENST00000637439 MAP3K4Q9Y6R4 1608 aa30.57■■■□□ 2.48
CIITA-215ENST00000637439 TEX14Q8IWB6 1497 aa30.55■■■□□ 2.48
CIITA-215ENST00000637439 WDR7Q9Y4E6 1490 aa30.5■■■□□ 2.47
CIITA-215ENST00000637439 PRXQ9BXM0 1461 aa30.49■■■□□ 2.47
CIITA-215ENST00000637439 COL17A1Q9UMD9 1497 aaPredicted RBP30.44■■■□□ 2.46
CIITA-215ENST00000637439 ABCA8O94911 1581 aa30.43■■■□□ 2.46
CIITA-215ENST00000637439 FAM9AQ8IZU1 332 aaPredicted RBP30.39■■■□□ 2.46
CIITA-215ENST00000637439 ADGRL1O94910 1474 aa30.35■■■□□ 2.45
CIITA-215ENST00000637439 CFAP43Q8NDM7 1665 aa30.35■■■□□ 2.45
CIITA-215ENST00000637439 CD109Q6YHK3 1445 aa30.33■■■□□ 2.45
CIITA-215ENST00000637439 MAGI3Q5TCQ9 1506 aa30.32■■■□□ 2.44
CIITA-215ENST00000637439 KCNH8Q96L42 1107 aa30.31■■■□□ 2.44
CIITA-215ENST00000637439 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
CIITA-215ENST00000637439 P3H3Q8IVL6 736 aa30.2■■■□□ 2.43
CIITA-215ENST00000637439 ATP10BO94823 1461 aa30.17■■■□□ 2.42
CIITA-215ENST00000637439 SAMD9Q5K651 1589 aa30.16■■■□□ 2.42
CIITA-215ENST00000637439 EEA1Q15075 1411 aa30.13■■■□□ 2.41
CIITA-215ENST00000637439 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
CIITA-215ENST00000637439 ARAP3Q8WWN8 1544 aa30.1■■■□□ 2.41
CIITA-215ENST00000637439 RAPGEF6Q8TEU7 1601 aa30.08■■■□□ 2.41
CIITA-215ENST00000637439 ABCA9Q8IUA7 1624 aa30.07■■■□□ 2.4
CIITA-215ENST00000637439 PHLDB1Q86UU1 1377 aa30.07■■■□□ 2.4
CIITA-215ENST00000637439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30■■■□□ 2.39
CIITA-215ENST00000637439 HNRNPUL2Q1KMD3 747 aaKnown RBP30■■■□□ 2.39
CIITA-215ENST00000637439 HECW2Q9P2P5 1572 aa29.98■■■□□ 2.39
CIITA-215ENST00000637439 KIF21BO75037 1637 aa29.97■■■□□ 2.39
CIITA-215ENST00000637439 NEO1Q92859 1461 aa29.96■■■□□ 2.39
CIITA-215ENST00000637439 NUP153P49790 1475 aaKnown RBP29.95■■■□□ 2.39
CIITA-215ENST00000637439 RANGAP1P46060 587 aaPredicted RBP29.92■■■□□ 2.38
CIITA-215ENST00000637439 FHOD3Q2V2M9 1422 aa29.92■■■□□ 2.38
CIITA-215ENST00000637439 EFCAB5A4FU69 1503 aa29.87■■■□□ 2.37
CIITA-215ENST00000637439 PLEKHD1A6NEE1 506 aa29.87■■■□□ 2.37
CIITA-215ENST00000637439 RAPGEF3O95398 923 aa29.86■■■□□ 2.37
CIITA-215ENST00000637439 ILDR1Q86SU0 546 aaPredicted RBP29.83■■■□□ 2.37
CIITA-215ENST00000637439 FRMPD1Q5SYB0 1578 aa29.77■■■□□ 2.36
CIITA-215ENST00000637439 ADAMTSL3P82987 1691 aa29.76■■■□□ 2.36
CIITA-215ENST00000637439 CFAP74Q9C0B2 1584 aa29.75■■■□□ 2.35
CIITA-215ENST00000637439 DENND4BO75064 1496 aaPredicted RBP29.73■■■□□ 2.35
CIITA-215ENST00000637439 FANCAO15360 1455 aa29.72■■■□□ 2.35
CIITA-215ENST00000637439 PTPRMP28827 1452 aa29.72■■■□□ 2.35
CIITA-215ENST00000637439 AKNAQ7Z591 1439 aa29.71■■■□□ 2.35
CIITA-215ENST00000637439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.71■■■□□ 2.35
CIITA-215ENST00000637439 BCORL1Q5H9F3 1711 aa29.7■■■□□ 2.34
CIITA-215ENST00000637439 ARID4BQ4LE39 1312 aaPredicted RBP29.7■■■□□ 2.34
CIITA-215ENST00000637439 RICTORQ6R327 1708 aa29.68■■■□□ 2.34
CIITA-215ENST00000637439 ARHGEF40Q8TER5 1519 aa29.66■■■□□ 2.34
CIITA-215ENST00000637439 TTC37Q6PGP7 1564 aa29.65■■■□□ 2.34
CIITA-215ENST00000637439 UBTFP17480 764 aaKnown RBP29.64■■■□□ 2.34
CIITA-215ENST00000637439 CDK13Q14004 1512 aaKnown RBP29.63■■■□□ 2.33
CIITA-215ENST00000637439 FMN1Q68DA7 1419 aa29.62■■■□□ 2.33
CIITA-215ENST00000637439 MADDQ8WXG6 1647 aa29.61■■■□□ 2.33
CIITA-215ENST00000637439 ZMYM4Q5VZL5 1548 aa29.6■■■□□ 2.33
CIITA-215ENST00000637439 HECW1Q76N89 1606 aa29.57■■■□□ 2.32
CIITA-215ENST00000637439 MAGI2Q86UL8 1455 aa29.56■■■□□ 2.32
CIITA-215ENST00000637439 PLCH2O75038 1416 aa29.55■■■□□ 2.32
CIITA-215ENST00000637439 POGZQ7Z3K3 1410 aa29.55■■■□□ 2.32
CIITA-215ENST00000637439 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
CIITA-215ENST00000637439 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
CIITA-215ENST00000637439 ZFYVE16Q7Z3T8 1539 aa29.54■■■□□ 2.32
CIITA-215ENST00000637439 EHMT2Q96KQ7 1210 aa29.53■■■□□ 2.32
CIITA-215ENST00000637439 ARHGAP35Q9NRY4 1499 aa29.53■■■□□ 2.32
CIITA-215ENST00000637439 RIMS1Q86UR5 1692 aaKnown RBP29.5■■■□□ 2.31
CIITA-215ENST00000637439 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
CIITA-215ENST00000637439 SCAPERQ9BY12 1400 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms