RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SENP3-EIF4A1A0A087X0R7 540 aa21.37■■□□□ 1.01
CLN5-218ENST00000637397 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
CLN5-218ENST00000637397 KDM2AQ9Y2K7 1162 aa21.36■■□□□ 1.01
CLN5-218ENST00000637397 CCNB3Q8WWL7 1395 aa21.35■■□□□ 1.01
CLN5-218ENST00000637397 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
CLN5-218ENST00000637397 KIF27Q86VH2 1401 aa21.33■■□□□ 1.01
CLN5-218ENST00000637397 VPS8Q8N3P4 1428 aa21.33■■□□□ 1
CLN5-218ENST00000637397 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
CLN5-218ENST00000637397 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
CLN5-218ENST00000637397 PPP4R2Q9NY27 417 aa21.22■□□□□ 0.99
CLN5-218ENST00000637397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLN5-218ENST00000637397 RBM19Q9Y4C8 960 aaKnown RBP21.22■□□□□ 0.99
CLN5-218ENST00000637397 TSPY4P0CV99 314 aa21.19■□□□□ 0.98
CLN5-218ENST00000637397 TSPY10P0CW01 314 aa21.19■□□□□ 0.98
CLN5-218ENST00000637397 TSHZ2Q9NRE2 1034 aa21.19■□□□□ 0.98
CLN5-218ENST00000637397 B4GALNT3Q6L9W6 998 aa21.19■□□□□ 0.98
CLN5-218ENST00000637397 WDR43Q15061 677 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLN5-218ENST00000637397 UPF2Q9HAU5 1272 aaKnown RBP21.16■□□□□ 0.98
CLN5-218ENST00000637397 CCER2I3L3R5 266 aa21.16■□□□□ 0.98
CLN5-218ENST00000637397 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.15■□□□□ 0.98
CLN5-218ENST00000637397 NEFMP07197 916 aa21.15■□□□□ 0.98
CLN5-218ENST00000637397 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
CLN5-218ENST00000637397 WIZO95785 1651 aa21.12■□□□□ 0.97
CLN5-218ENST00000637397 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
CLN5-218ENST00000637397 CHGAP10645 457 aaKnown RBP21.09■□□□□ 0.97
CLN5-218ENST00000637397 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
CLN5-218ENST00000637397 ARXQ96QS3 562 aa21.09■□□□□ 0.97
CLN5-218ENST00000637397 HSP90AA1P07900 732 aaKnown RBP21.07■□□□□ 0.96
CLN5-218ENST00000637397 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
CLN5-218ENST00000637397 NOP58Q9Y2X3 529 aaKnown RBP21.05■□□□□ 0.96
CLN5-218ENST00000637397 RGL3Q3MIN7 710 aa21.05■□□□□ 0.96
CLN5-218ENST00000637397 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
CLN5-218ENST00000637397 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
CLN5-218ENST00000637397 CARD11Q9BXL7 1154 aa21.03■□□□□ 0.96
CLN5-218ENST00000637397 RUSC2Q8N2Y8 1516 aa21.02■□□□□ 0.95
CLN5-218ENST00000637397 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
CLN5-218ENST00000637397 DDRGK1Q96HY6 314 aa20.99■□□□□ 0.95
CLN5-218ENST00000637397 LAS1LQ9Y4W2 734 aaKnown RBP20.99■□□□□ 0.95
CLN5-218ENST00000637397 SLC24A1O60721 1099 aa20.99■□□□□ 0.95
CLN5-218ENST00000637397 DHX57Q6P158 1386 aaKnown RBP20.99■□□□□ 0.95
CLN5-218ENST00000637397 CUX2O14529 1486 aa20.98■□□□□ 0.95
CLN5-218ENST00000637397 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
CLN5-218ENST00000637397 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
CLN5-218ENST00000637397 ANP32BQ92688 251 aaKnown RBP20.95■□□□□ 0.94
CLN5-218ENST00000637397 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
CLN5-218ENST00000637397 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
CLN5-218ENST00000637397 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
CLN5-218ENST00000637397 RTN4Q9NQC3 1192 aaKnown RBP20.91■□□□□ 0.94
CLN5-218ENST00000637397 DEKP35659 375 aaKnown RBP20.9■□□□□ 0.94
CLN5-218ENST00000637397 PPM1GO15355 546 aaPredicted RBP20.9■□□□□ 0.94
CLN5-218ENST00000637397 PLEKHD1A6NEE1 506 aa20.9■□□□□ 0.94
CLN5-218ENST00000637397 FOXD1Q16676 465 aa20.89■□□□□ 0.94
CLN5-218ENST00000637397 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
CLN5-218ENST00000637397 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
CLN5-218ENST00000637397 RGS3P49796 1198 aa20.84■□□□□ 0.93
CLN5-218ENST00000637397 BECN1Q14457 450 aa20.83■□□□□ 0.93
CLN5-218ENST00000637397 ERICH6BQ5W0A0 696 aa20.83■□□□□ 0.93
CLN5-218ENST00000637397 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
CLN5-218ENST00000637397 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
CLN5-218ENST00000637397 GLIPR1L2Q4G1C9 344 aa20.76■□□□□ 0.91
CLN5-218ENST00000637397 MPHOSPH9Q99550 1183 aa20.75■□□□□ 0.91
CLN5-218ENST00000637397 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
CLN5-218ENST00000637397 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
CLN5-218ENST00000637397 L3MBTL2Q969R5 705 aa20.72■□□□□ 0.91
CLN5-218ENST00000637397 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
CLN5-218ENST00000637397 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
CLN5-218ENST00000637397 PKD2Q13563 968 aa20.68■□□□□ 0.9
CLN5-218ENST00000637397 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
CLN5-218ENST00000637397 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
CLN5-218ENST00000637397 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
CLN5-218ENST00000637397 FMN1Q68DA7 1419 aa20.65■□□□□ 0.9
CLN5-218ENST00000637397 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
CLN5-218ENST00000637397 RCAN3Q9UKA8 241 aa20.65■□□□□ 0.9
CLN5-218ENST00000637397 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
CLN5-218ENST00000637397 TRIM44Q96DX7 344 aaPredicted RBP20.62■□□□□ 0.89
CLN5-218ENST00000637397 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
CLN5-218ENST00000637397 TMF1P82094 1093 aa20.61■□□□□ 0.89
CLN5-218ENST00000637397 MYH16Q9H6N6 1097 aa20.61■□□□□ 0.89
CLN5-218ENST00000637397 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
CLN5-218ENST00000637397 FTSJ3Q8IY81 847 aaKnown RBP20.61■□□□□ 0.89
CLN5-218ENST00000637397 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
CLN5-218ENST00000637397 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLN5-218ENST00000637397 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
CLN5-218ENST00000637397 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.88
CLN5-218ENST00000637397 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
CLN5-218ENST00000637397 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
CLN5-218ENST00000637397 KTN1Q86UP2 1357 aaKnown RBP20.55■□□□□ 0.88
CLN5-218ENST00000637397 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
CLN5-218ENST00000637397 ATAD2BQ9ULI0 1458 aa20.54■□□□□ 0.88
CLN5-218ENST00000637397 RALBP1Q15311 655 aa20.53■□□□□ 0.88
CLN5-218ENST00000637397 GOLGA6L22H0YM25 854 aa20.52■□□□□ 0.88
CLN5-218ENST00000637397 NCLP19338 710 aaKnown RBP20.5■□□□□ 0.87
CLN5-218ENST00000637397 KIF21BO75037 1637 aa20.5■□□□□ 0.87
CLN5-218ENST00000637397 NUP155O75694 1391 aa20.48■□□□□ 0.87
CLN5-218ENST00000637397 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
CLN5-218ENST00000637397 NAP1L5Q96NT1 182 aaPredicted RBP20.47■□□□□ 0.87
CLN5-218ENST00000637397 ZBED9Q6R2W3 1325 aa20.46■□□□□ 0.87
CLN5-218ENST00000637397 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
CLN5-218ENST00000637397 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
CLN5-218ENST00000637397 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms