RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
CTSD-211ENST00000637387 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
CTSD-211ENST00000637387 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
CTSD-211ENST00000637387 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
CTSD-211ENST00000637387 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
CTSD-211ENST00000637387 GRIN2AQ12879 1464 aa24.69■■□□□ 1.54
CTSD-211ENST00000637387 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
CTSD-211ENST00000637387 CTTNBP2Q8WZ74 1663 aa24.69■■□□□ 1.54
CTSD-211ENST00000637387 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
CTSD-211ENST00000637387 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
CTSD-211ENST00000637387 NUP160Q12769 1436 aa24.63■■□□□ 1.53
CTSD-211ENST00000637387 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
CTSD-211ENST00000637387 CLIP1P30622 1438 aa24.52■■□□□ 1.52
CTSD-211ENST00000637387 SHROOM2Q13796 1616 aa24.49■■□□□ 1.51
CTSD-211ENST00000637387 ERCC6L2Q5T890 1561 aa24.48■■□□□ 1.51
CTSD-211ENST00000637387 ARHGAP35Q9NRY4 1499 aa24.43■■□□□ 1.5
CTSD-211ENST00000637387 IQGAP2Q13576 1575 aa24.4■■□□□ 1.5
CTSD-211ENST00000637387 SAMD9Q5K651 1589 aa24.38■■□□□ 1.49
CTSD-211ENST00000637387 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
CTSD-211ENST00000637387 JPH4Q96JJ6 628 aa24.37■■□□□ 1.49
CTSD-211ENST00000637387 EFCAB5A4FU69 1503 aa24.35■■□□□ 1.49
CTSD-211ENST00000637387 PRG4Q92954 1404 aaPredicted RBP24.34■■□□□ 1.49
CTSD-211ENST00000637387 VPS8Q8N3P4 1428 aa24.32■■□□□ 1.48
CTSD-211ENST00000637387 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
CTSD-211ENST00000637387 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
CTSD-211ENST00000637387 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
CTSD-211ENST00000637387 FHOD3Q2V2M9 1422 aa24.19■■□□□ 1.46
CTSD-211ENST00000637387 KIAA0556O60303 1618 aa24.19■■□□□ 1.46
CTSD-211ENST00000637387 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
CTSD-211ENST00000637387 DISP1Q96F81 1524 aa24.16■■□□□ 1.46
CTSD-211ENST00000637387 LRRIQ1Q96JM4 1722 aa24.08■■□□□ 1.45
CTSD-211ENST00000637387 P3H3Q8IVL6 736 aa24.08■■□□□ 1.44
CTSD-211ENST00000637387 CFAP43Q8NDM7 1665 aa24.06■■□□□ 1.44
CTSD-211ENST00000637387 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
CTSD-211ENST00000637387 FYCO1Q9BQS8 1478 aa24.03■■□□□ 1.44
CTSD-211ENST00000637387 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
CTSD-211ENST00000637387 CASKIN1Q8WXD9 1431 aa24■■□□□ 1.43
CTSD-211ENST00000637387 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
CTSD-211ENST00000637387 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
CTSD-211ENST00000637387 PTPRGP23470 1445 aa23.99■■□□□ 1.43
CTSD-211ENST00000637387 MAPKBP1O60336 1514 aa23.97■■□□□ 1.43
CTSD-211ENST00000637387 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
CTSD-211ENST00000637387 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
CTSD-211ENST00000637387 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
CTSD-211ENST00000637387 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
CTSD-211ENST00000637387 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
CTSD-211ENST00000637387 ABCC10Q5T3U5 1492 aa23.92■■□□□ 1.42
CTSD-211ENST00000637387 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
CTSD-211ENST00000637387 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
CTSD-211ENST00000637387 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
CTSD-211ENST00000637387 DIP2BQ9P265 1576 aa23.85■■□□□ 1.41
CTSD-211ENST00000637387 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
CTSD-211ENST00000637387 ABCC2Q92887 1545 aa23.84■■□□□ 1.41
CTSD-211ENST00000637387 ABCA8O94911 1581 aa23.83■■□□□ 1.41
CTSD-211ENST00000637387 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
CTSD-211ENST00000637387 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
CTSD-211ENST00000637387 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
CTSD-211ENST00000637387 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
CTSD-211ENST00000637387 APLP2Q06481 763 aa23.8■■□□□ 1.4
CTSD-211ENST00000637387 PLB1Q6P1J6 1458 aa23.8■■□□□ 1.4
CTSD-211ENST00000637387 CCDC18Q5T9S5 1454 aa23.79■■□□□ 1.4
CTSD-211ENST00000637387 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
CTSD-211ENST00000637387 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
CTSD-211ENST00000637387 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
CTSD-211ENST00000637387 MAGI3Q5TCQ9 1506 aa23.76■■□□□ 1.39
CTSD-211ENST00000637387 KDM5BQ9UGL1 1544 aa23.74■■□□□ 1.39
CTSD-211ENST00000637387 ASXL2Q76L83 1435 aa23.72■■□□□ 1.39
CTSD-211ENST00000637387 EHBP1L1Q8N3D4 1523 aa23.71■■□□□ 1.39
CTSD-211ENST00000637387 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
CTSD-211ENST00000637387 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
CTSD-211ENST00000637387 GLI2P10070 1586 aa23.66■■□□□ 1.38
CTSD-211ENST00000637387 SUPT6HQ7KZ85 1726 aaKnown RBP23.65■■□□□ 1.38
CTSD-211ENST00000637387 ZCCHC11Q5TAX3 1644 aaKnown RBP23.64■■□□□ 1.38
CTSD-211ENST00000637387 TSPOAP1O95153 1857 aa23.61■■□□□ 1.37
CTSD-211ENST00000637387 ATP10BO94823 1461 aa23.58■■□□□ 1.37
CTSD-211ENST00000637387 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.36
CTSD-211ENST00000637387 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
CTSD-211ENST00000637387 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
CTSD-211ENST00000637387 PPRC1Q5VV67 1664 aaKnown RBP23.56■■□□□ 1.36
CTSD-211ENST00000637387 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
CTSD-211ENST00000637387 ARID3CA6NKF2 412 aa23.55■■□□□ 1.36
CTSD-211ENST00000637387 KDM6BO15054 1643 aa23.55■■□□□ 1.36
CTSD-211ENST00000637387 WDR7Q9Y4E6 1490 aa23.53■■□□□ 1.36
CTSD-211ENST00000637387 KIF14Q15058 1648 aa23.52■■□□□ 1.36
CTSD-211ENST00000637387 MAP3K4Q9Y6R4 1608 aa23.51■■□□□ 1.35
CTSD-211ENST00000637387 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
CTSD-211ENST00000637387 MYOM3Q5VTT5 1437 aa23.43■■□□□ 1.34
CTSD-211ENST00000637387 CCNB3Q8WWL7 1395 aa23.43■■□□□ 1.34
CTSD-211ENST00000637387 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
CTSD-211ENST00000637387 FGD6Q6ZV73 1430 aa23.42■■□□□ 1.34
CTSD-211ENST00000637387 TEX14Q8IWB6 1497 aa23.41■■□□□ 1.34
CTSD-211ENST00000637387 ITSN2Q9NZM3 1697 aa23.4■■□□□ 1.34
CTSD-211ENST00000637387 CDC42BPAQ5VT25 1732 aa23.4■■□□□ 1.34
CTSD-211ENST00000637387 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
CTSD-211ENST00000637387 PTPN23Q9H3S7 1636 aa23.38■■□□□ 1.33
CTSD-211ENST00000637387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
CTSD-211ENST00000637387 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
CTSD-211ENST00000637387 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
CTSD-211ENST00000637387 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
CTSD-211ENST00000637387 CD109Q6YHK3 1445 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms