RNA–Protein interactions for RNA: ENST00000637383.1

SMARCA2-262, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-262	ENST00000637383	ERCC6L2	Q5T890	1561 aa		13.46	□□□□□ -0.25
SMARCA2-262	ENST00000637383	JPH4	Q96JJ6	628 aa		13.46	□□□□□ -0.25
SMARCA2-262	ENST00000637383	SHROOM2	Q13796	1616 aa		13.43	□□□□□ -0.26
SMARCA2-262	ENST00000637383	PRG4	Q92954	1404 aa	Predicted RBP	13.43	□□□□□ -0.26
SMARCA2-262	ENST00000637383	CARMIL1	Q5VZK9	1371 aa		13.4	□□□□□ -0.26
SMARCA2-262	ENST00000637383	KIAA0586	Q9BVV6	1533 aa		13.39	□□□□□ -0.27
SMARCA2-262	ENST00000637383	RUSC2	Q8N2Y8	1516 aa		13.38	□□□□□ -0.27
SMARCA2-262	ENST00000637383	CUL7	Q14999	1698 aa		13.36	□□□□□ -0.27
SMARCA2-262	ENST00000637383	RAPGEF2	Q9Y4G8	1499 aa		13.27	□□□□□ -0.29
SMARCA2-262	ENST00000637383	NPM1	P06748	294 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SMARCA2-262	ENST00000637383	PTPRG	P23470	1445 aa		13.25	□□□□□ -0.29
SMARCA2-262	ENST00000637383	PLPPR3	Q6T4P5	718 aa		13.24	□□□□□ -0.29
SMARCA2-262	ENST00000637383	CARMIL2	Q6F5E8	1435 aa		13.23	□□□□□ -0.29
SMARCA2-262	ENST00000637383	TNIK	Q9UKE5	1360 aa		13.22	□□□□□ -0.29
SMARCA2-262	ENST00000637383	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.22	□□□□□ -0.29
SMARCA2-262	ENST00000637383	IQGAP2	Q13576	1575 aa		13.22	□□□□□ -0.29
SMARCA2-262	ENST00000637383	ADCY10	Q96PN6	1610 aa		13.21	□□□□□ -0.3
SMARCA2-262	ENST00000637383	FAM69C	Q0P6D2	419 aa		13.19	□□□□□ -0.3
SMARCA2-262	ENST00000637383	DISP1	Q96F81	1524 aa		13.18	□□□□□ -0.3
SMARCA2-262	ENST00000637383	ABCC10	Q5T3U5	1492 aa		13.18	□□□□□ -0.3
SMARCA2-262	ENST00000637383	PRX	Q9BXM0	1461 aa		13.18	□□□□□ -0.3
SMARCA2-262	ENST00000637383	MAPKBP1	O60336	1514 aa		13.18	□□□□□ -0.3
SMARCA2-262	ENST00000637383	UGGT2	Q9NYU1	1516 aa		13.17	□□□□□ -0.3
SMARCA2-262	ENST00000637383	CSRNP3	Q8WYN3	585 aa		13.14	□□□□□ -0.31
SMARCA2-262	ENST00000637383	UACA	Q9BZF9	1416 aa		13.13	□□□□□ -0.31
SMARCA2-262	ENST00000637383	ABCC2	Q92887	1545 aa		13.13	□□□□□ -0.31
SMARCA2-262	ENST00000637383	UHRF1BP1L	A0JNW5	1464 aa		13.12	□□□□□ -0.31
SMARCA2-262	ENST00000637383	KIF13A	Q9H1H9	1805 aa		13.12	□□□□□ -0.31
SMARCA2-262	ENST00000637383	DIP2B	Q9P265	1576 aa		13.1	□□□□□ -0.31
SMARCA2-262	ENST00000637383	KIAA0556	O60303	1618 aa		13.1	□□□□□ -0.31
SMARCA2-262	ENST00000637383	ASXL2	Q76L83	1435 aa		13.09	□□□□□ -0.31
SMARCA2-262	ENST00000637383	GOLGA3	Q08378	1498 aa		13.08	□□□□□ -0.32
SMARCA2-262	ENST00000637383	PLB1	Q6P1J6	1458 aa		13.07	□□□□□ -0.32
SMARCA2-262	ENST00000637383	KDM5B	Q9UGL1	1544 aa		13.07	□□□□□ -0.32
SMARCA2-262	ENST00000637383	EEA1	Q15075	1411 aa		13.06	□□□□□ -0.32
SMARCA2-262	ENST00000637383	CTTNBP2	Q8WZ74	1663 aa		13.05	□□□□□ -0.32
SMARCA2-262	ENST00000637383	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.04	□□□□□ -0.32
SMARCA2-262	ENST00000637383	P3H3	Q8IVL6	736 aa		13.02	□□□□□ -0.33
SMARCA2-262	ENST00000637383	ABCA8	O94911	1581 aa		12.99	□□□□□ -0.33
SMARCA2-262	ENST00000637383	GLI2	P10070	1586 aa		12.99	□□□□□ -0.33
SMARCA2-262	ENST00000637383	EPRS	P07814	1512 aa	Known RBP	12.99	□□□□□ -0.33
SMARCA2-262	ENST00000637383	FOXD1	Q16676	465 aa		12.99	□□□□□ -0.33
SMARCA2-262	ENST00000637383	ZCCHC11	Q5TAX3	1644 aa	Known RBP	12.98	□□□□□ -0.33
SMARCA2-262	ENST00000637383	WDR7	Q9Y4E6	1490 aa		12.97	□□□□□ -0.33
SMARCA2-262	ENST00000637383	TSPOAP1	O95153	1857 aa		12.96	□□□□□ -0.33
SMARCA2-262	ENST00000637383	RANGAP1	P46060	587 aa	Predicted RBP	12.96	□□□□□ -0.33
SMARCA2-262	ENST00000637383	KDM6B	O15054	1643 aa		12.95	□□□□□ -0.34
SMARCA2-262	ENST00000637383	ARID3C	A6NKF2	412 aa		12.94	□□□□□ -0.34
SMARCA2-262	ENST00000637383	KCNH8	Q96L42	1107 aa		12.94	□□□□□ -0.34
SMARCA2-262	ENST00000637383	SAMD9	Q5K651	1589 aa		12.93	□□□□□ -0.34
SMARCA2-262	ENST00000637383	ATP10B	O94823	1461 aa		12.92	□□□□□ -0.34
SMARCA2-262	ENST00000637383	PPRC1	Q5VV67	1664 aa	Known RBP	12.91	□□□□□ -0.34
SMARCA2-262	ENST00000637383	KIF21B	O75037	1637 aa		12.91	□□□□□ -0.34
SMARCA2-262	ENST00000637383	MAP3K4	Q9Y6R4	1608 aa		12.91	□□□□□ -0.34
SMARCA2-262	ENST00000637383	FHOD3	Q2V2M9	1422 aa		12.9	□□□□□ -0.34
SMARCA2-262	ENST00000637383	TEX14	Q8IWB6	1497 aa		12.9	□□□□□ -0.34
SMARCA2-262	ENST00000637383	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.9	□□□□□ -0.34
SMARCA2-262	ENST00000637383	CD109	Q6YHK3	1445 aa		12.89	□□□□□ -0.35
SMARCA2-262	ENST00000637383	UBTF	P17480	764 aa	Known RBP	12.89	□□□□□ -0.35
SMARCA2-262	ENST00000637383	EHMT2	Q96KQ7	1210 aa		12.89	□□□□□ -0.35
SMARCA2-262	ENST00000637383	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.86	□□□□□ -0.35
SMARCA2-262	ENST00000637383	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.86	□□□□□ -0.35
SMARCA2-262	ENST00000637383	MAGI3	Q5TCQ9	1506 aa		12.86	□□□□□ -0.35
SMARCA2-262	ENST00000637383	NUP153	P49790	1475 aa	Known RBP	12.85	□□□□□ -0.35
SMARCA2-262	ENST00000637383	KDM4F	A0A1W2PPD8	638 aa		12.85	□□□□□ -0.35
SMARCA2-262	ENST00000637383	RAPGEF6	Q8TEU7	1601 aa		12.84	□□□□□ -0.35
SMARCA2-262	ENST00000637383	EFCAB5	A4FU69	1503 aa		12.83	□□□□□ -0.35
SMARCA2-262	ENST00000637383	CFAP43	Q8NDM7	1665 aa		12.81	□□□□□ -0.36
SMARCA2-262	ENST00000637383	PLEKHD1	A6NEE1	506 aa		12.81	□□□□□ -0.36
SMARCA2-262	ENST00000637383	ARHGAP35	Q9NRY4	1499 aa		12.78	□□□□□ -0.36
SMARCA2-262	ENST00000637383	ABCA9	Q8IUA7	1624 aa		12.77	□□□□□ -0.37
SMARCA2-262	ENST00000637383	PHLDB1	Q86UU1	1377 aa		12.76	□□□□□ -0.37
SMARCA2-262	ENST00000637383	FMN1	Q68DA7	1419 aa		12.76	□□□□□ -0.37
SMARCA2-262	ENST00000637383	ARAP3	Q8WWN8	1544 aa		12.76	□□□□□ -0.37
SMARCA2-262	ENST00000637383	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.75	□□□□□ -0.37
SMARCA2-262	ENST00000637383	RAPGEF3	O95398	923 aa		12.73	□□□□□ -0.37
SMARCA2-262	ENST00000637383	CDK13	Q14004	1512 aa	Known RBP	12.72	□□□□□ -0.37
SMARCA2-262	ENST00000637383	ADGRL1	O94910	1474 aa		12.72	□□□□□ -0.37
SMARCA2-262	ENST00000637383	NEO1	Q92859	1461 aa		12.72	□□□□□ -0.37
SMARCA2-262	ENST00000637383	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.7	□□□□□ -0.38
SMARCA2-262	ENST00000637383	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
SMARCA2-262	ENST00000637383	FANCA	O15360	1455 aa		12.67	□□□□□ -0.38
SMARCA2-262	ENST00000637383	HECW1	Q76N89	1606 aa		12.67	□□□□□ -0.38
SMARCA2-262	ENST00000637383	AKNA	Q7Z591	1439 aa		12.67	□□□□□ -0.38
SMARCA2-262	ENST00000637383	PLCH2	O75038	1416 aa		12.65	□□□□□ -0.38
SMARCA2-262	ENST00000637383	DENND4B	O75064	1496 aa	Predicted RBP	12.65	□□□□□ -0.38
SMARCA2-262	ENST00000637383	TTC37	Q6PGP7	1564 aa		12.64	□□□□□ -0.39
SMARCA2-262	ENST00000637383	CLIP1	P30622	1438 aa		12.63	□□□□□ -0.39
SMARCA2-262	ENST00000637383	TRO	Q12816	1431 aa	Predicted RBP	12.63	□□□□□ -0.39
SMARCA2-262	ENST00000637383	CASKIN1	Q8WXD9	1431 aa		12.63	□□□□□ -0.39
SMARCA2-262	ENST00000637383	FRMPD1	Q5SYB0	1578 aa		12.63	□□□□□ -0.39
SMARCA2-262	ENST00000637383	EFCAB2	Q5VUJ9	269 aa		12.62	□□□□□ -0.39
SMARCA2-262	ENST00000637383	SCAPER	Q9BY12	1400 aa		12.6	□□□□□ -0.39
SMARCA2-262	ENST00000637383	CFAP74	Q9C0B2	1584 aa		12.6	□□□□□ -0.39
SMARCA2-262	ENST00000637383	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.59	□□□□□ -0.39
SMARCA2-262	ENST00000637383	CCDC18	Q5T9S5	1454 aa		12.59	□□□□□ -0.39
SMARCA2-262	ENST00000637383	PCF11	O94913	1555 aa	Known RBP	12.58	□□□□□ -0.4
SMARCA2-262	ENST00000637383	KIF14	Q15058	1648 aa		12.58	□□□□□ -0.4
SMARCA2-262	ENST00000637383	FYCO1	Q9BQS8	1478 aa		12.57	□□□□□ -0.4
SMARCA2-262	ENST00000637383	POGZ	Q7Z3K3	1410 aa		12.56	□□□□□ -0.4

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