RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
SCN2A-216ENST00000637367 UPF2Q9HAU5 1272 aaKnown RBP8.7□□□□□ -1.02
SCN2A-216ENST00000637367 LAS1LQ9Y4W2 734 aaKnown RBP8.69□□□□□ -1.02
SCN2A-216ENST00000637367 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCN2A-216ENST00000637367 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
SCN2A-216ENST00000637367 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.66□□□□□ -1.02
SCN2A-216ENST00000637367 GOLGA3Q08378 1498 aa8.66□□□□□ -1.02
SCN2A-216ENST00000637367 ANP32BQ92688 251 aaKnown RBP8.65□□□□□ -1.03
SCN2A-216ENST00000637367 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.03
SCN2A-216ENST00000637367 TNIKQ9UKE5 1360 aa8.64□□□□□ -1.03
SCN2A-216ENST00000637367 TSPY4P0CV99 314 aa8.62□□□□□ -1.03
SCN2A-216ENST00000637367 TSPY10P0CW01 314 aa8.62□□□□□ -1.03
SCN2A-216ENST00000637367 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
SCN2A-216ENST00000637367 SOGA1O94964 1423 aa8.61□□□□□ -1.03
SCN2A-216ENST00000637367 RGS3P49796 1198 aa8.61□□□□□ -1.03
SCN2A-216ENST00000637367 TSHZ2Q9NRE2 1034 aa8.61□□□□□ -1.03
SCN2A-216ENST00000637367 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
SCN2A-216ENST00000637367 PLPPR3Q6T4P5 718 aa8.6□□□□□ -1.03
SCN2A-216ENST00000637367 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
SCN2A-216ENST00000637367 NEUROD2Q15784 382 aa8.59□□□□□ -1.03
SCN2A-216ENST00000637367 KCNH8Q96L42 1107 aa8.59□□□□□ -1.03
SCN2A-216ENST00000637367 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
SCN2A-216ENST00000637367 DEKP35659 375 aaKnown RBP8.58□□□□□ -1.04
SCN2A-216ENST00000637367 EEA1Q15075 1411 aa8.57□□□□□ -1.04
SCN2A-216ENST00000637367 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
SCN2A-216ENST00000637367 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
SCN2A-216ENST00000637367 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
SCN2A-216ENST00000637367 GLIPR1L2Q4G1C9 344 aa8.56□□□□□ -1.04
SCN2A-216ENST00000637367 CCNB3Q8WWL7 1395 aa8.55□□□□□ -1.04
SCN2A-216ENST00000637367 DDRGK1Q96HY6 314 aa8.54□□□□□ -1.04
SCN2A-216ENST00000637367 CEP164Q9UPV0 1460 aa8.54□□□□□ -1.04
SCN2A-216ENST00000637367 FOXD1Q16676 465 aa8.54□□□□□ -1.04
SCN2A-216ENST00000637367 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
SCN2A-216ENST00000637367 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
SCN2A-216ENST00000637367 PLEKHG5O94827 1062 aa8.53□□□□□ -1.04
SCN2A-216ENST00000637367 TNNT2P45379 298 aaPredicted RBP8.53□□□□□ -1.04
SCN2A-216ENST00000637367 FRAT1Q92837 279 aaPredicted RBP8.53□□□□□ -1.04
SCN2A-216ENST00000637367 BECN1Q14457 450 aa8.52□□□□□ -1.05
SCN2A-216ENST00000637367 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
SCN2A-216ENST00000637367 NCLP19338 710 aaKnown RBP8.51□□□□□ -1.05
SCN2A-216ENST00000637367 TRIM44Q96DX7 344 aaPredicted RBP8.51□□□□□ -1.05
SCN2A-216ENST00000637367 RB1CC1Q8TDY2 1594 aa8.51□□□□□ -1.05
SCN2A-216ENST00000637367 HSPA5P11021 654 aaKnown RBP8.51□□□□□ -1.05
SCN2A-216ENST00000637367 CFDP1Q9UEE9 299 aaPredicted RBP8.51□□□□□ -1.05
SCN2A-216ENST00000637367 KNSTRNQ9Y448 316 aa8.5□□□□□ -1.05
SCN2A-216ENST00000637367 CHMP7Q8WUX9 453 aaPredicted RBP8.5□□□□□ -1.05
SCN2A-216ENST00000637367 ABCC8Q09428 1581 aa8.49□□□□□ -1.05
SCN2A-216ENST00000637367 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
SCN2A-216ENST00000637367 CCER2I3L3R5 266 aa8.49□□□□□ -1.05
SCN2A-216ENST00000637367 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
SCN2A-216ENST00000637367 CCDC88BA6NC98 1476 aa8.48□□□□□ -1.05
SCN2A-216ENST00000637367 NAP1L5Q96NT1 182 aaPredicted RBP8.48□□□□□ -1.05
SCN2A-216ENST00000637367 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
SCN2A-216ENST00000637367 ESF1Q9H501 851 aaKnown RBP8.48□□□□□ -1.05
SCN2A-216ENST00000637367 ARID4BQ4LE39 1312 aaPredicted RBP8.47□□□□□ -1.05
SCN2A-216ENST00000637367 ERICH6BQ5W0A0 696 aa8.47□□□□□ -1.05
SCN2A-216ENST00000637367 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
SCN2A-216ENST00000637367 RAB3GAP2Q9H2M9 1393 aa8.47□□□□□ -1.05
SCN2A-216ENST00000637367 PLEKHD1A6NEE1 506 aa8.47□□□□□ -1.05
SCN2A-216ENST00000637367 DCAF11Q8TEB1 546 aa8.47□□□□□ -1.05
SCN2A-216ENST00000637367 VPS8Q8N3P4 1428 aa8.46□□□□□ -1.05
SCN2A-216ENST00000637367 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.06
SCN2A-216ENST00000637367 SETD5Q9C0A6 1442 aa8.44□□□□□ -1.06
SCN2A-216ENST00000637367 PPP1R15AO75807 674 aaPredicted RBP8.43□□□□□ -1.06
SCN2A-216ENST00000637367 GOLGA6L22H0YM25 854 aa8.43□□□□□ -1.06
SCN2A-216ENST00000637367 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
SCN2A-216ENST00000637367 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCN2A-216ENST00000637367 SLKQ9H2G2 1235 aaPredicted RBP8.43□□□□□ -1.06
SCN2A-216ENST00000637367 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
SCN2A-216ENST00000637367 PTMAP06454 111 aaKnown RBP8.42□□□□□ -1.06
SCN2A-216ENST00000637367 U2SURPO15042 1029 aaKnown RBP8.41□□□□□ -1.06
SCN2A-216ENST00000637367 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
SCN2A-216ENST00000637367 DNTTIP2Q5QJE6 756 aaKnown RBP8.41□□□□□ -1.06
SCN2A-216ENST00000637367 MROH2BQ7Z745 1585 aa8.41□□□□□ -1.06
SCN2A-216ENST00000637367 CFAP53Q96M91 514 aa8.41□□□□□ -1.06
SCN2A-216ENST00000637367 GZF1Q9H116 711 aaPredicted RBP8.41□□□□□ -1.06
SCN2A-216ENST00000637367 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
SCN2A-216ENST00000637367 RCAN3Q9UKA8 241 aa8.4□□□□□ -1.06
SCN2A-216ENST00000637367 CARMIL1Q5VZK9 1371 aa8.4□□□□□ -1.07
SCN2A-216ENST00000637367 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
SCN2A-216ENST00000637367 PKD2Q13563 968 aa8.39□□□□□ -1.07
SCN2A-216ENST00000637367 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
SCN2A-216ENST00000637367 CUX2O14529 1486 aa8.38□□□□□ -1.07
SCN2A-216ENST00000637367 HSP90AB1P08238 724 aaKnown RBP8.38□□□□□ -1.07
SCN2A-216ENST00000637367 SLC4A3P48751 1232 aa8.38□□□□□ -1.07
SCN2A-216ENST00000637367 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
SCN2A-216ENST00000637367 TAOK2Q9UL54 1235 aa8.38□□□□□ -1.07
SCN2A-216ENST00000637367 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCN2A-216ENST00000637367 DHX57Q6P158 1386 aaKnown RBP8.38□□□□□ -1.07
SCN2A-216ENST00000637367 MAPK8IP3Q9UPT6 1336 aa8.38□□□□□ -1.07
SCN2A-216ENST00000637367 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
SCN2A-216ENST00000637367 MPHOSPH9Q99550 1183 aa8.37□□□□□ -1.07
SCN2A-216ENST00000637367 ARID3AQ99856 593 aa8.36□□□□□ -1.07
SCN2A-216ENST00000637367 RUSC2Q8N2Y8 1516 aa8.36□□□□□ -1.07
SCN2A-216ENST00000637367 TMF1P82094 1093 aa8.36□□□□□ -1.07
SCN2A-216ENST00000637367 FHAD1B1AJZ9 1412 aa8.36□□□□□ -1.07
SCN2A-216ENST00000637367 BAZ1AQ9NRL2 1556 aaPredicted RBP8.36□□□□□ -1.07
SCN2A-216ENST00000637367 A0A0G2JS52 829 aa8.36□□□□□ -1.07
SCN2A-216ENST00000637367 NUDCQ9Y266 331 aa8.35□□□□□ -1.07
SCN2A-216ENST00000637367 APBB1O00213 710 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms