RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 DNTTIP2Q5QJE6 756 aaKnown RBP14.82□□□□□ -0.04
SMARCA2-258ENST00000637103 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
SMARCA2-258ENST00000637103 CDK11BP21127 795 aaKnown RBP14.81□□□□□ -0.04
SMARCA2-258ENST00000637103 RBM19Q9Y4C8 960 aaKnown RBP14.81□□□□□ -0.04
SMARCA2-258ENST00000637103 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-258ENST00000637103 CLIP1P30622 1438 aa14.76□□□□□ -0.05
SMARCA2-258ENST00000637103 ARID3CA6NKF2 412 aa14.74□□□□□ -0.05
SMARCA2-258ENST00000637103 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCA2-258ENST00000637103 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
SMARCA2-258ENST00000637103 EEA1Q15075 1411 aa14.7□□□□□ -0.06
SMARCA2-258ENST00000637103 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
SMARCA2-258ENST00000637103 CHIC2Q9UKJ5 165 aa14.69□□□□□ -0.06
SMARCA2-258ENST00000637103 CCER2I3L3R5 266 aa14.68□□□□□ -0.06
SMARCA2-258ENST00000637103 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
SMARCA2-258ENST00000637103 MSNP26038 577 aaKnown RBP14.68□□□□□ -0.06
SMARCA2-258ENST00000637103 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
SMARCA2-258ENST00000637103 B4GALNT3Q6L9W6 998 aa14.67□□□□□ -0.06
SMARCA2-258ENST00000637103 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
SMARCA2-258ENST00000637103 ZRSR1Q15695 479 aaKnown RBP14.66□□□□□ -0.06
SMARCA2-258ENST00000637103 FBLN2P98095 1184 aa14.65□□□□□ -0.06
SMARCA2-258ENST00000637103 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
SMARCA2-258ENST00000637103 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
SMARCA2-258ENST00000637103 KDM2AQ9Y2K7 1162 aa14.64□□□□□ -0.07
SMARCA2-258ENST00000637103 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
SMARCA2-258ENST00000637103 ABCC9O60706 1549 aa14.63□□□□□ -0.07
SMARCA2-258ENST00000637103 HSP90AB1P08238 724 aaKnown RBP14.63□□□□□ -0.07
SMARCA2-258ENST00000637103 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
SMARCA2-258ENST00000637103 RGS3P49796 1198 aa14.61□□□□□ -0.07
SMARCA2-258ENST00000637103 PTMSP20962 102 aa14.61□□□□□ -0.07
SMARCA2-258ENST00000637103 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
SMARCA2-258ENST00000637103 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
SMARCA2-258ENST00000637103 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
SMARCA2-258ENST00000637103 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.08
SMARCA2-258ENST00000637103 NRDCO43847 1150 aa14.57□□□□□ -0.08
SMARCA2-258ENST00000637103 MS4A1P11836 297 aa14.57□□□□□ -0.08
SMARCA2-258ENST00000637103 CDCA8Q53HL2 280 aa14.57□□□□□ -0.08
SMARCA2-258ENST00000637103 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
SMARCA2-258ENST00000637103 CHMP4BQ9H444 224 aaKnown RBP14.57□□□□□ -0.08
SMARCA2-258ENST00000637103 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-258ENST00000637103 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
SMARCA2-258ENST00000637103 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
SMARCA2-258ENST00000637103 TIMELESSQ9UNS1 1208 aa14.56□□□□□ -0.08
SMARCA2-258ENST00000637103 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
SMARCA2-258ENST00000637103 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
SMARCA2-258ENST00000637103 TCERG1O14776 1098 aaKnown RBP14.54□□□□□ -0.08
SMARCA2-258ENST00000637103 KNSTRNQ9Y448 316 aa14.54□□□□□ -0.08
SMARCA2-258ENST00000637103 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
SMARCA2-258ENST00000637103 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
SMARCA2-258ENST00000637103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMARCA2-258ENST00000637103 STAG3Q9UJ98 1225 aa14.53□□□□□ -0.08
SMARCA2-258ENST00000637103 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
SMARCA2-258ENST00000637103 RRP7BPQ9NSQ0 103 aa14.52□□□□□ -0.09
SMARCA2-258ENST00000637103 CFAP44Q96MT7 982 aa14.5□□□□□ -0.09
SMARCA2-258ENST00000637103 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
SMARCA2-258ENST00000637103 GBP4Q96PP9 640 aa14.49□□□□□ -0.09
SMARCA2-258ENST00000637103 CARD11Q9BXL7 1154 aa14.48□□□□□ -0.09
SMARCA2-258ENST00000637103 GOLGA6L3A6NEY3 463 aa14.47□□□□□ -0.09
SMARCA2-258ENST00000637103 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
SMARCA2-258ENST00000637103 TPRNQ4KMQ1 711 aa14.46□□□□□ -0.1
SMARCA2-258ENST00000637103 KIAA2012Q0VF49 1180 aa14.45□□□□□ -0.1
SMARCA2-258ENST00000637103 FRAT1Q92837 279 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-258ENST00000637103 ESF1Q9H501 851 aaKnown RBP14.45□□□□□ -0.1
SMARCA2-258ENST00000637103 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
SMARCA2-258ENST00000637103 SIN3AQ96ST3 1273 aa14.44□□□□□ -0.1
SMARCA2-258ENST00000637103 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
SMARCA2-258ENST00000637103 HSP90AA2PQ14568 343 aaPredicted RBP14.44□□□□□ -0.1
SMARCA2-258ENST00000637103 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
SMARCA2-258ENST00000637103 GOLGA6L4A6NEF3 574 aa14.41□□□□□ -0.1
SMARCA2-258ENST00000637103 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
SMARCA2-258ENST00000637103 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
SMARCA2-258ENST00000637103 DRC7Q8IY82 874 aa14.4□□□□□ -0.1
SMARCA2-258ENST00000637103 MCCP23508 829 aa14.4□□□□□ -0.1
SMARCA2-258ENST00000637103 TNNT3P45378 269 aaPredicted RBP14.39□□□□□ -0.11
SMARCA2-258ENST00000637103 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
SMARCA2-258ENST00000637103 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
SMARCA2-258ENST00000637103 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
SMARCA2-258ENST00000637103 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
SMARCA2-258ENST00000637103 NEUROD2Q15784 382 aa14.36□□□□□ -0.11
SMARCA2-258ENST00000637103 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
SMARCA2-258ENST00000637103 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
SMARCA2-258ENST00000637103 CC2D1BQ5T0F9 858 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-258ENST00000637103 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
SMARCA2-258ENST00000637103 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.11
SMARCA2-258ENST00000637103 GSE1Q14687 1217 aa14.33□□□□□ -0.12
SMARCA2-258ENST00000637103 RGL3Q3MIN7 710 aa14.32□□□□□ -0.12
SMARCA2-258ENST00000637103 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
SMARCA2-258ENST00000637103 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
SMARCA2-258ENST00000637103 HSPA5P11021 654 aaKnown RBP14.31□□□□□ -0.12
SMARCA2-258ENST00000637103 RWDD1Q9H446 243 aaPredicted RBP14.31□□□□□ -0.12
SMARCA2-258ENST00000637103 ARID3AQ99856 593 aa14.3□□□□□ -0.12
SMARCA2-258ENST00000637103 FGD1P98174 961 aa14.3□□□□□ -0.12
SMARCA2-258ENST00000637103 TMF1P82094 1093 aa14.3□□□□□ -0.12
SMARCA2-258ENST00000637103 KCNJ4P48050 445 aa14.29□□□□□ -0.12
SMARCA2-258ENST00000637103 KTN1Q86UP2 1357 aaKnown RBP14.29□□□□□ -0.12
SMARCA2-258ENST00000637103 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
SMARCA2-258ENST00000637103 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
SMARCA2-258ENST00000637103 RALBP1Q15311 655 aa14.27□□□□□ -0.12
SMARCA2-258ENST00000637103 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
SMARCA2-258ENST00000637103 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
SMARCA2-258ENST00000637103 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms