RNA–Protein interactions for RNA: ENST00000636974.1

CACNA1A-233, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,783 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-233	ENST00000636974	CUL7	Q14999	1698 aa		11.99	□□□□□ -0.49
CACNA1A-233	ENST00000636974	DIEXF	Q68CQ4	756 aa	Known RBP	11.98	□□□□□ -0.49
CACNA1A-233	ENST00000636974	EFCAB5	A4FU69	1503 aa		11.98	□□□□□ -0.49
CACNA1A-233	ENST00000636974	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNA1A-233	ENST00000636974	POLA1	P09884	1462 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNA1A-233	ENST00000636974	RANGAP1	P46060	587 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNA1A-233	ENST00000636974	TAOK2	Q9UL54	1235 aa		11.96	□□□□□ -0.49
CACNA1A-233	ENST00000636974	CCNB3	Q8WWL7	1395 aa		11.96	□□□□□ -0.5
CACNA1A-233	ENST00000636974	TIAM1	Q13009	1591 aa		11.96	□□□□□ -0.5
CACNA1A-233	ENST00000636974	PPP6R1	Q9UPN7	881 aa		11.95	□□□□□ -0.5
CACNA1A-233	ENST00000636974	AQR	O60306	1485 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CACNA1A-233	ENST00000636974	KANK4	Q5T7N3	995 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1A-233	ENST00000636974	PDS5B	Q9NTI5	1447 aa		11.93	□□□□□ -0.5
CACNA1A-233	ENST00000636974	BCAN	Q96GW7	911 aa		11.92	□□□□□ -0.5
CACNA1A-233	ENST00000636974	DHX57	Q6P158	1386 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1A-233	ENST00000636974	LRRC9	Q6ZRR7	1453 aa		11.91	□□□□□ -0.5
CACNA1A-233	ENST00000636974	WDR97	A6NE52	1622 aa		11.9	□□□□□ -0.5
CACNA1A-233	ENST00000636974	FYCO1	Q9BQS8	1478 aa		11.9	□□□□□ -0.5
CACNA1A-233	ENST00000636974	CFAP43	Q8NDM7	1665 aa		11.9	□□□□□ -0.5
CACNA1A-233	ENST00000636974	PPP4R3CP	Q6ZMV5	832 aa		11.9	□□□□□ -0.51
CACNA1A-233	ENST00000636974	RAD54L2	Q9Y4B4	1467 aa		11.89	□□□□□ -0.51
CACNA1A-233	ENST00000636974	CENPB	P07199	599 aa	Predicted RBP	11.89	□□□□□ -0.51
CACNA1A-233	ENST00000636974	FMN1	Q68DA7	1419 aa		11.88	□□□□□ -0.51
CACNA1A-233	ENST00000636974	CASKIN1	Q8WXD9	1431 aa		11.88	□□□□□ -0.51
CACNA1A-233	ENST00000636974	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
CACNA1A-233	ENST00000636974	NES	P48681	1621 aa		11.88	□□□□□ -0.51
CACNA1A-233	ENST00000636974	URB2	Q14146	1524 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1A-233	ENST00000636974	ABCA5	Q8WWZ7	1642 aa		11.87	□□□□□ -0.51
CACNA1A-233	ENST00000636974	PLCB2	Q00722	1185 aa		11.87	□□□□□ -0.51
CACNA1A-233	ENST00000636974	CTTNBP2	Q8WZ74	1663 aa		11.87	□□□□□ -0.51
CACNA1A-233	ENST00000636974	PCF11	O94913	1555 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1A-233	ENST00000636974	NPM3	O75607	178 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1A-233	ENST00000636974	ARX	Q96QS3	562 aa		11.84	□□□□□ -0.51
CACNA1A-233	ENST00000636974	DNAJC5B	Q9UF47	199 aa		11.83	□□□□□ -0.52
CACNA1A-233	ENST00000636974	GAPVD1	Q14C86	1478 aa		11.83	□□□□□ -0.52
CACNA1A-233	ENST00000636974	THOC2	Q8NI27	1593 aa	Known RBP	11.83	□□□□□ -0.52
CACNA1A-233	ENST00000636974	ACIN1	Q9UKV3	1341 aa	Known RBP	11.83	□□□□□ -0.52
CACNA1A-233	ENST00000636974	SAMD9	Q5K651	1589 aa		11.8	□□□□□ -0.52
CACNA1A-233	ENST00000636974	TIMELESS	Q9UNS1	1208 aa		11.8	□□□□□ -0.52
CACNA1A-233	ENST00000636974	FHOD3	Q2V2M9	1422 aa		11.79	□□□□□ -0.52
CACNA1A-233	ENST00000636974	SETD5	Q9C0A6	1442 aa		11.79	□□□□□ -0.52
CACNA1A-233	ENST00000636974	PHLDB1	Q86UU1	1377 aa		11.78	□□□□□ -0.52
CACNA1A-233	ENST00000636974	SNAPC4	Q5SXM2	1469 aa		11.78	□□□□□ -0.52
CACNA1A-233	ENST00000636974	KIF21A	Q7Z4S6	1674 aa		11.78	□□□□□ -0.52
CACNA1A-233	ENST00000636974	SCAF1	Q9H7N4	1312 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1A-233	ENST00000636974	RAB3GAP2	Q9H2M9	1393 aa		11.77	□□□□□ -0.53
CACNA1A-233	ENST00000636974	TARBP1	Q13395	1621 aa	Known RBP	11.76	□□□□□ -0.53
CACNA1A-233	ENST00000636974	FKBP8	Q14318	412 aa		11.75	□□□□□ -0.53
CACNA1A-233	ENST00000636974	TPRN	Q4KMQ1	711 aa		11.75	□□□□□ -0.53
CACNA1A-233	ENST00000636974	TDRD9	Q8NDG6	1382 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-233	ENST00000636974	PELP1	Q8IZL8	1130 aa	Known RBP	11.73	□□□□□ -0.53
CACNA1A-233	ENST00000636974	MRC2	Q9UBG0	1479 aa		11.73	□□□□□ -0.53
CACNA1A-233	ENST00000636974	CCDC18	Q5T9S5	1454 aa		11.72	□□□□□ -0.53
CACNA1A-233	ENST00000636974	MAPKBP1	O60336	1514 aa		11.72	□□□□□ -0.53
CACNA1A-233	ENST00000636974	GRIN2B	Q13224	1484 aa		11.72	□□□□□ -0.53
CACNA1A-233	ENST00000636974	HAP1	P54257	671 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNA1A-233	ENST00000636974	NEUROD1	Q13562	356 aa		11.72	□□□□□ -0.53
CACNA1A-233	ENST00000636974	EHBP1L1	Q8N3D4	1523 aa		11.71	□□□□□ -0.53
CACNA1A-233	ENST00000636974	FGD6	Q6ZV73	1430 aa		11.71	□□□□□ -0.53
CACNA1A-233	ENST00000636974	MTUS2	Q5JR59	1369 aa		11.7	□□□□□ -0.54
CACNA1A-233	ENST00000636974	P3H3	Q8IVL6	736 aa		11.69	□□□□□ -0.54
CACNA1A-233	ENST00000636974	ADAMTS12	P58397	1594 aa		11.68	□□□□□ -0.54
CACNA1A-233	ENST00000636974	FAM50A	Q14320	339 aa	Known RBP	11.68	□□□□□ -0.54
CACNA1A-233	ENST00000636974	IFT140	Q96RY7	1462 aa		11.68	□□□□□ -0.54
CACNA1A-233	ENST00000636974	PBRM1	Q86U86	1689 aa		11.67	□□□□□ -0.54
CACNA1A-233	ENST00000636974	TULP1	O00294	542 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1A-233	ENST00000636974	MYOM3	Q5VTT5	1437 aa		11.67	□□□□□ -0.54
CACNA1A-233	ENST00000636974	IQGAP2	Q13576	1575 aa		11.67	□□□□□ -0.54
CACNA1A-233	ENST00000636974	HECW1	Q76N89	1606 aa		11.67	□□□□□ -0.54
CACNA1A-233	ENST00000636974	ITGAE	P38570	1179 aa		11.67	□□□□□ -0.54
CACNA1A-233	ENST00000636974	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.66	□□□□□ -0.54
CACNA1A-233	ENST00000636974	HFM1	A2PYH4	1435 aa		11.66	□□□□□ -0.54
CACNA1A-233	ENST00000636974	MIER1	Q8N108	512 aa		11.66	□□□□□ -0.54
CACNA1A-233	ENST00000636974	FOXD4L1	Q9NU39	408 aa		11.66	□□□□□ -0.54
CACNA1A-233	ENST00000636974	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1A-233	ENST00000636974	ARHGEF11	O15085	1522 aa		11.66	□□□□□ -0.54
CACNA1A-233	ENST00000636974	WDR62	O43379	1518 aa		11.65	□□□□□ -0.54
CACNA1A-233	ENST00000636974	NCOA2	Q15596	1464 aa		11.65	□□□□□ -0.54
CACNA1A-233	ENST00000636974	UGGT2	Q9NYU1	1516 aa		11.64	□□□□□ -0.55
CACNA1A-233	ENST00000636974	AKNA	Q7Z591	1439 aa		11.63	□□□□□ -0.55
CACNA1A-233	ENST00000636974	UACA	Q9BZF9	1416 aa		11.62	□□□□□ -0.55
CACNA1A-233	ENST00000636974	TCOF1	Q13428	1488 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-233	ENST00000636974	MIA2	Q96PC5	1412 aa		11.61	□□□□□ -0.55
CACNA1A-233	ENST00000636974	KIAA0586	Q9BVV6	1533 aa		11.6	□□□□□ -0.55
CACNA1A-233	ENST00000636974	GTF3C3	Q9Y5Q9	886 aa		11.6	□□□□□ -0.55
CACNA1A-233	ENST00000636974	LRRIQ1	Q96JM4	1722 aa		11.58	□□□□□ -0.55
CACNA1A-233	ENST00000636974	EPRS	P07814	1512 aa	Known RBP	11.58	□□□□□ -0.55
CACNA1A-233	ENST00000636974	PTPN23	Q9H3S7	1636 aa		11.58	□□□□□ -0.56
CACNA1A-233	ENST00000636974	NAIP	Q13075	1403 aa		11.56	□□□□□ -0.56
CACNA1A-233	ENST00000636974	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA1A-233	ENST00000636974	KIAA0556	O60303	1618 aa		11.54	□□□□□ -0.56
CACNA1A-233	ENST00000636974	MAGI3	Q5TCQ9	1506 aa		11.54	□□□□□ -0.56
CACNA1A-233	ENST00000636974	GRIN2A	Q12879	1464 aa		11.54	□□□□□ -0.56
CACNA1A-233	ENST00000636974	PTPRK	Q15262	1439 aa		11.54	□□□□□ -0.56
CACNA1A-233	ENST00000636974	PPP1R15A	O75807	674 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA1A-233	ENST00000636974	GCC2	Q8IWJ2	1684 aa		11.53	□□□□□ -0.56
CACNA1A-233	ENST00000636974	TONSL	Q96HA7	1378 aa		11.52	□□□□□ -0.56
CACNA1A-233	ENST00000636974	YTHDC1	Q96MU7	727 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1A-233	ENST00000636974	VSIG10	Q8N0Z9	540 aa		11.51	□□□□□ -0.57
CACNA1A-233	ENST00000636974	EIF4G3	O43432	1585 aa	Known RBP	11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms