RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 GRIN2BQ13224 1484 aa21.29■■□□□ 1
SMARCA2-254ENST00000636903 FBLN2P98095 1184 aa21.28■■□□□ 1
SMARCA2-254ENST00000636903 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
SMARCA2-254ENST00000636903 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
SMARCA2-254ENST00000636903 ADAMTS12P58397 1594 aa21.22■□□□□ 0.99
SMARCA2-254ENST00000636903 FHOD3Q2V2M9 1422 aa21.21■□□□□ 0.99
SMARCA2-254ENST00000636903 APLP2Q06481 763 aa21.19■□□□□ 0.98
SMARCA2-254ENST00000636903 ATP1B4Q9UN42 357 aaPredicted RBP21.19■□□□□ 0.98
SMARCA2-254ENST00000636903 CTTNBP2Q8WZ74 1663 aa21.18■□□□□ 0.98
SMARCA2-254ENST00000636903 KANK4Q5T7N3 995 aaPredicted RBP21.16■□□□□ 0.98
SMARCA2-254ENST00000636903 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
SMARCA2-254ENST00000636903 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
SMARCA2-254ENST00000636903 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
SMARCA2-254ENST00000636903 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
SMARCA2-254ENST00000636903 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
SMARCA2-254ENST00000636903 ARID3CA6NKF2 412 aa21.01■□□□□ 0.95
SMARCA2-254ENST00000636903 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
SMARCA2-254ENST00000636903 CEP170Q5SW79 1584 aa20.99■□□□□ 0.95
SMARCA2-254ENST00000636903 EFCAB5A4FU69 1503 aa20.98■□□□□ 0.95
SMARCA2-254ENST00000636903 SAMD9Q5K651 1589 aa20.97■□□□□ 0.95
SMARCA2-254ENST00000636903 KIAA0586Q9BVV6 1533 aa20.95■□□□□ 0.94
SMARCA2-254ENST00000636903 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
SMARCA2-254ENST00000636903 JPH4Q96JJ6 628 aa20.89■□□□□ 0.93
SMARCA2-254ENST00000636903 FMN1Q68DA7 1419 aa20.89■□□□□ 0.93
SMARCA2-254ENST00000636903 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
SMARCA2-254ENST00000636903 HRCP23327 699 aa20.88■□□□□ 0.93
SMARCA2-254ENST00000636903 TIAM1Q13009 1591 aa20.88■□□□□ 0.93
SMARCA2-254ENST00000636903 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
SMARCA2-254ENST00000636903 NUP160Q12769 1436 aa20.87■□□□□ 0.93
SMARCA2-254ENST00000636903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
SMARCA2-254ENST00000636903 UGGT2Q9NYU1 1516 aa20.85■□□□□ 0.93
SMARCA2-254ENST00000636903 CHD1O14646 1710 aa20.85■□□□□ 0.93
SMARCA2-254ENST00000636903 FYCO1Q9BQS8 1478 aa20.84■□□□□ 0.93
SMARCA2-254ENST00000636903 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
SMARCA2-254ENST00000636903 LRRIQ1Q96JM4 1722 aa20.82■□□□□ 0.92
SMARCA2-254ENST00000636903 KIAA0556O60303 1618 aa20.81■□□□□ 0.92
SMARCA2-254ENST00000636903 ITGAEP38570 1179 aa20.8■□□□□ 0.92
SMARCA2-254ENST00000636903 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.91
SMARCA2-254ENST00000636903 CFAP43Q8NDM7 1665 aa20.75■□□□□ 0.91
SMARCA2-254ENST00000636903 CDK13Q14004 1512 aaKnown RBP20.74■□□□□ 0.91
SMARCA2-254ENST00000636903 MTUS2Q5JR59 1369 aa20.73■□□□□ 0.91
SMARCA2-254ENST00000636903 PLB1Q6P1J6 1458 aa20.72■□□□□ 0.91
SMARCA2-254ENST00000636903 MAP3K1Q13233 1512 aa20.72■□□□□ 0.91
SMARCA2-254ENST00000636903 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
SMARCA2-254ENST00000636903 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
SMARCA2-254ENST00000636903 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
SMARCA2-254ENST00000636903 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
SMARCA2-254ENST00000636903 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
SMARCA2-254ENST00000636903 ERCC6L2Q5T890 1561 aa20.67■□□□□ 0.9
SMARCA2-254ENST00000636903 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
SMARCA2-254ENST00000636903 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
SMARCA2-254ENST00000636903 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
SMARCA2-254ENST00000636903 NUP153P49790 1475 aaKnown RBP20.65■□□□□ 0.9
SMARCA2-254ENST00000636903 HECW1Q76N89 1606 aa20.64■□□□□ 0.89
SMARCA2-254ENST00000636903 RAPGEF6Q8TEU7 1601 aa20.61■□□□□ 0.89
SMARCA2-254ENST00000636903 NCOA2Q15596 1464 aa20.58■□□□□ 0.88
SMARCA2-254ENST00000636903 PTPRGP23470 1445 aa20.57■□□□□ 0.88
SMARCA2-254ENST00000636903 CCDC18Q5T9S5 1454 aa20.57■□□□□ 0.88
SMARCA2-254ENST00000636903 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
SMARCA2-254ENST00000636903 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
SMARCA2-254ENST00000636903 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
SMARCA2-254ENST00000636903 FGD6Q6ZV73 1430 aa20.5■□□□□ 0.87
SMARCA2-254ENST00000636903 SUPT6HQ7KZ85 1726 aaKnown RBP20.49■□□□□ 0.87
SMARCA2-254ENST00000636903 ABCA8O94911 1581 aa20.48■□□□□ 0.87
SMARCA2-254ENST00000636903 ATP10BO94823 1461 aa20.46■□□□□ 0.87
SMARCA2-254ENST00000636903 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
SMARCA2-254ENST00000636903 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
SMARCA2-254ENST00000636903 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
SMARCA2-254ENST00000636903 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
SMARCA2-254ENST00000636903 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
SMARCA2-254ENST00000636903 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
SMARCA2-254ENST00000636903 PTPRKQ15262 1439 aa20.41■□□□□ 0.86
SMARCA2-254ENST00000636903 CHIC2Q9UKJ5 165 aa20.41■□□□□ 0.86
SMARCA2-254ENST00000636903 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
SMARCA2-254ENST00000636903 PLEKHD1A6NEE1 506 aa20.4■□□□□ 0.86
SMARCA2-254ENST00000636903 KIF14Q15058 1648 aa20.4■□□□□ 0.86
SMARCA2-254ENST00000636903 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
SMARCA2-254ENST00000636903 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
SMARCA2-254ENST00000636903 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
SMARCA2-254ENST00000636903 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
SMARCA2-254ENST00000636903 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
SMARCA2-254ENST00000636903 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
SMARCA2-254ENST00000636903 CFDP1Q9UEE9 299 aaPredicted RBP20.3■□□□□ 0.84
SMARCA2-254ENST00000636903 DHX57Q6P158 1386 aaKnown RBP20.3■□□□□ 0.84
SMARCA2-254ENST00000636903 ABCC2Q92887 1545 aa20.29■□□□□ 0.84
SMARCA2-254ENST00000636903 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
SMARCA2-254ENST00000636903 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
SMARCA2-254ENST00000636903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMARCA2-254ENST00000636903 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
SMARCA2-254ENST00000636903 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
SMARCA2-254ENST00000636903 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
SMARCA2-254ENST00000636903 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
SMARCA2-254ENST00000636903 ADCY10Q96PN6 1610 aa20.2■□□□□ 0.82
SMARCA2-254ENST00000636903 ZCCHC11Q5TAX3 1644 aaKnown RBP20.19■□□□□ 0.82
SMARCA2-254ENST00000636903 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
SMARCA2-254ENST00000636903 CDC42BPAQ5VT25 1732 aa20.18■□□□□ 0.82
SMARCA2-254ENST00000636903 NAIPQ13075 1403 aa20.17■□□□□ 0.82
SMARCA2-254ENST00000636903 ABCC5O15440 1437 aa20.17■□□□□ 0.82
SMARCA2-254ENST00000636903 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMARCA2-254ENST00000636903 DAPK1P53355 1430 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms