RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
CTSD-208ENST00000636843 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
CTSD-208ENST00000636843 CUL7Q14999 1698 aa21.87■■□□□ 1.09
CTSD-208ENST00000636843 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
CTSD-208ENST00000636843 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
CTSD-208ENST00000636843 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
CTSD-208ENST00000636843 KIF13AQ9H1H9 1805 aa21.79■■□□□ 1.08
CTSD-208ENST00000636843 ABCC10Q5T3U5 1492 aa21.78■■□□□ 1.08
CTSD-208ENST00000636843 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
CTSD-208ENST00000636843 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
CTSD-208ENST00000636843 ADCY10Q96PN6 1610 aa21.75■■□□□ 1.07
CTSD-208ENST00000636843 PTPRGP23470 1445 aa21.72■■□□□ 1.07
CTSD-208ENST00000636843 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
CTSD-208ENST00000636843 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
CTSD-208ENST00000636843 DIP2BQ9P265 1576 aa21.67■■□□□ 1.06
CTSD-208ENST00000636843 IQGAP2Q13576 1575 aa21.64■■□□□ 1.06
CTSD-208ENST00000636843 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
CTSD-208ENST00000636843 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
CTSD-208ENST00000636843 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
CTSD-208ENST00000636843 UHRF1BP1LA0JNW5 1464 aa21.57■■□□□ 1.04
CTSD-208ENST00000636843 DISP1Q96F81 1524 aa21.56■■□□□ 1.04
CTSD-208ENST00000636843 UACAQ9BZF9 1416 aa21.54■■□□□ 1.04
CTSD-208ENST00000636843 PLB1Q6P1J6 1458 aa21.54■■□□□ 1.04
CTSD-208ENST00000636843 UGGT2Q9NYU1 1516 aa21.53■■□□□ 1.04
CTSD-208ENST00000636843 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
CTSD-208ENST00000636843 KDM6BO15054 1643 aa21.5■■□□□ 1.03
CTSD-208ENST00000636843 TSPOAP1O95153 1857 aa21.48■■□□□ 1.03
CTSD-208ENST00000636843 GLI2P10070 1586 aa21.46■■□□□ 1.03
CTSD-208ENST00000636843 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
CTSD-208ENST00000636843 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
CTSD-208ENST00000636843 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.01
CTSD-208ENST00000636843 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
CTSD-208ENST00000636843 KDM4FA0A1W2PPD8 638 aa21.37■■□□□ 1.01
CTSD-208ENST00000636843 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
CTSD-208ENST00000636843 PPRC1Q5VV67 1664 aaKnown RBP21.35■■□□□ 1.01
CTSD-208ENST00000636843 ZCCHC11Q5TAX3 1644 aaKnown RBP21.35■■□□□ 1.01
CTSD-208ENST00000636843 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
CTSD-208ENST00000636843 TEX14Q8IWB6 1497 aa21.31■■□□□ 1
CTSD-208ENST00000636843 MAP3K4Q9Y6R4 1608 aa21.31■■□□□ 1
CTSD-208ENST00000636843 WDR7Q9Y4E6 1490 aa21.31■■□□□ 1
CTSD-208ENST00000636843 ABCA8O94911 1581 aa21.27■□□□□ 0.99
CTSD-208ENST00000636843 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
CTSD-208ENST00000636843 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
CTSD-208ENST00000636843 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
CTSD-208ENST00000636843 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
CTSD-208ENST00000636843 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
CTSD-208ENST00000636843 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
CTSD-208ENST00000636843 P3H3Q8IVL6 736 aa21.16■□□□□ 0.98
CTSD-208ENST00000636843 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
CTSD-208ENST00000636843 CFAP43Q8NDM7 1665 aa21.14■□□□□ 0.97
CTSD-208ENST00000636843 EEA1Q15075 1411 aa21.12■□□□□ 0.97
CTSD-208ENST00000636843 ATP10BO94823 1461 aa21.11■□□□□ 0.97
CTSD-208ENST00000636843 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
CTSD-208ENST00000636843 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
CTSD-208ENST00000636843 ARAP3Q8WWN8 1544 aa21.02■□□□□ 0.96
CTSD-208ENST00000636843 PHLDB1Q86UU1 1377 aa21.02■□□□□ 0.96
CTSD-208ENST00000636843 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
CTSD-208ENST00000636843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
CTSD-208ENST00000636843 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
CTSD-208ENST00000636843 ABCA9Q8IUA7 1624 aa20.98■□□□□ 0.95
CTSD-208ENST00000636843 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
CTSD-208ENST00000636843 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
CTSD-208ENST00000636843 NUP153P49790 1475 aaKnown RBP20.95■□□□□ 0.94
CTSD-208ENST00000636843 NEO1Q92859 1461 aa20.93■□□□□ 0.94
CTSD-208ENST00000636843 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
CTSD-208ENST00000636843 KIF21BO75037 1637 aa20.89■□□□□ 0.94
CTSD-208ENST00000636843 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.93
CTSD-208ENST00000636843 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
CTSD-208ENST00000636843 HECW2Q9P2P5 1572 aa20.85■□□□□ 0.93
CTSD-208ENST00000636843 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
CTSD-208ENST00000636843 FRMPD1Q5SYB0 1578 aa20.78■□□□□ 0.92
CTSD-208ENST00000636843 AKNAQ7Z591 1439 aa20.77■□□□□ 0.92
CTSD-208ENST00000636843 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
CTSD-208ENST00000636843 FANCAO15360 1455 aa20.76■□□□□ 0.91
CTSD-208ENST00000636843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.915e-7■■■■□ 21.6
CTSD-208ENST00000636843 ILDR1Q86SU0 546 aaPredicted RBP20.76■□□□□ 0.91
CTSD-208ENST00000636843 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
CTSD-208ENST00000636843 ARID4BQ4LE39 1312 aaPredicted RBP20.75■□□□□ 0.91
CTSD-208ENST00000636843 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
CTSD-208ENST00000636843 CFAP74Q9C0B2 1584 aa20.74■□□□□ 0.91
CTSD-208ENST00000636843 FMN1Q68DA7 1419 aa20.74■□□□□ 0.91
CTSD-208ENST00000636843 PTPRMP28827 1452 aa20.73■□□□□ 0.91
CTSD-208ENST00000636843 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
CTSD-208ENST00000636843 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
CTSD-208ENST00000636843 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
CTSD-208ENST00000636843 ATP1B4Q9UN42 357 aaPredicted RBP20.69■□□□□ 0.9
CTSD-208ENST00000636843 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
CTSD-208ENST00000636843 ARHGEF40Q8TER5 1519 aa20.69■□□□□ 0.9
CTSD-208ENST00000636843 RICTORQ6R327 1708 aa20.69■□□□□ 0.9
CTSD-208ENST00000636843 ARHGAP35Q9NRY4 1499 aa20.68■□□□□ 0.9
CTSD-208ENST00000636843 BCORL1Q5H9F3 1711 aa20.68■□□□□ 0.9
CTSD-208ENST00000636843 PLCH2O75038 1416 aa20.68■□□□□ 0.9
CTSD-208ENST00000636843 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
CTSD-208ENST00000636843 ZMYM4Q5VZL5 1548 aa20.66■□□□□ 0.9
CTSD-208ENST00000636843 MAGI2Q86UL8 1455 aa20.65■□□□□ 0.9
CTSD-208ENST00000636843 POGZQ7Z3K3 1410 aa20.63■□□□□ 0.89
CTSD-208ENST00000636843 SCAPERQ9BY12 1400 aa20.63■□□□□ 0.89
CTSD-208ENST00000636843 MADDQ8WXG6 1647 aa20.63■□□□□ 0.89
CTSD-208ENST00000636843 EFCAB2Q5VUJ9 269 aa20.63■□□□□ 0.89
CTSD-208ENST00000636843 ZFYVE16Q7Z3T8 1539 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms