RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
CACNA1D-209ENST00000636448 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
CACNA1D-209ENST00000636448 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
CACNA1D-209ENST00000636448 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
CACNA1D-209ENST00000636448 LAS1LQ9Y4W2 734 aaKnown RBP11.01□□□□□ -0.65
CACNA1D-209ENST00000636448 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
CACNA1D-209ENST00000636448 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
CACNA1D-209ENST00000636448 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
CACNA1D-209ENST00000636448 EIF4G2P78344 907 aaKnown RBP eCLIP11□□□□□ -0.65
CACNA1D-209ENST00000636448 RGL3Q3MIN7 710 aa10.99□□□□□ -0.65
CACNA1D-209ENST00000636448 FOXD1Q16676 465 aa10.99□□□□□ -0.65
CACNA1D-209ENST00000636448 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
CACNA1D-209ENST00000636448 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
CACNA1D-209ENST00000636448 MROH2BQ7Z745 1585 aa10.93□□□□□ -0.66
CACNA1D-209ENST00000636448 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
CACNA1D-209ENST00000636448 CCNB3Q8WWL7 1395 aa10.89□□□□□ -0.67
CACNA1D-209ENST00000636448 RGS3P49796 1198 aa10.88□□□□□ -0.67
CACNA1D-209ENST00000636448 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
CACNA1D-209ENST00000636448 DEKP35659 375 aaKnown RBP10.87□□□□□ -0.67
CACNA1D-209ENST00000636448 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
CACNA1D-209ENST00000636448 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
CACNA1D-209ENST00000636448 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
CACNA1D-209ENST00000636448 NEFMP07197 916 aa10.85□□□□□ -0.67
CACNA1D-209ENST00000636448 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 HSPA5P11021 654 aaKnown RBP10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 PLPPR3Q6T4P5 718 aa10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 NOP58Q9Y2X3 529 aaKnown RBP10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 RAB3GAP2Q9H2M9 1393 aa10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 EEA1Q15075 1411 aa10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
CACNA1D-209ENST00000636448 VPS8Q8N3P4 1428 aa10.82□□□□□ -0.68
CACNA1D-209ENST00000636448 TNNT2P45379 298 aaPredicted RBP10.82□□□□□ -0.68
CACNA1D-209ENST00000636448 CARD11Q9BXL7 1154 aa10.82□□□□□ -0.68
CACNA1D-209ENST00000636448 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.81□□□□□ -0.68
CACNA1D-209ENST00000636448 WIZO95785 1651 aa10.81□□□□□ -0.68
CACNA1D-209ENST00000636448 TSPY4P0CV99 314 aa10.81□□□□□ -0.68
CACNA1D-209ENST00000636448 TSPY10P0CW01 314 aa10.81□□□□□ -0.68
CACNA1D-209ENST00000636448 NACADO15069 1562 aa10.79□□□□□ -0.68
CACNA1D-209ENST00000636448 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
CACNA1D-209ENST00000636448 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
CACNA1D-209ENST00000636448 DHX57Q6P158 1386 aaKnown RBP10.77□□□□□ -0.68
CACNA1D-209ENST00000636448 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
CACNA1D-209ENST00000636448 SPRYD3Q8NCJ5 442 aa10.77□□□□□ -0.69
CACNA1D-209ENST00000636448 KIF27Q86VH2 1401 aa10.77□□□□□ -0.69
CACNA1D-209ENST00000636448 UPF2Q9HAU5 1272 aaKnown RBP10.76□□□□□ -0.69
CACNA1D-209ENST00000636448 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-209ENST00000636448 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-209ENST00000636448 RAPGEF2Q9Y4G8 1499 aa10.75□□□□□ -0.69
CACNA1D-209ENST00000636448 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-209ENST00000636448 DCAF11Q8TEB1 546 aa10.74□□□□□ -0.69
CACNA1D-209ENST00000636448 SETD5Q9C0A6 1442 aa10.74□□□□□ -0.69
CACNA1D-209ENST00000636448 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
CACNA1D-209ENST00000636448 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
CACNA1D-209ENST00000636448 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
CACNA1D-209ENST00000636448 L3MBTL2Q969R5 705 aa10.72□□□□□ -0.69
CACNA1D-209ENST00000636448 CHMP7Q8WUX9 453 aaPredicted RBP10.71□□□□□ -0.69
CACNA1D-209ENST00000636448 CUX2O14529 1486 aa10.71□□□□□ -0.7
CACNA1D-209ENST00000636448 BAZ1AQ9NRL2 1556 aaPredicted RBP10.7□□□□□ -0.7
CACNA1D-209ENST00000636448 CARMIL1Q5VZK9 1371 aa10.7□□□□□ -0.7
CACNA1D-209ENST00000636448 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
CACNA1D-209ENST00000636448 PLIN1O60240 522 aa10.68□□□□□ -0.7
CACNA1D-209ENST00000636448 KNSTRNQ9Y448 316 aa10.67□□□□□ -0.7
CACNA1D-209ENST00000636448 SLKQ9H2G2 1235 aaPredicted RBP10.66□□□□□ -0.7
CACNA1D-209ENST00000636448 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
CACNA1D-209ENST00000636448 PKD2Q13563 968 aa10.66□□□□□ -0.7
CACNA1D-209ENST00000636448 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
CACNA1D-209ENST00000636448 PLEKHD1A6NEE1 506 aa10.64□□□□□ -0.71
CACNA1D-209ENST00000636448 NCLP19338 710 aaKnown RBP10.64□□□□□ -0.71
CACNA1D-209ENST00000636448 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-209ENST00000636448 SAFB2Q14151 953 aaKnown RBP eCLIP10.63□□□□□ -0.71
CACNA1D-209ENST00000636448 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
CACNA1D-209ENST00000636448 ANP32BQ92688 251 aaKnown RBP10.63□□□□□ -0.71
CACNA1D-209ENST00000636448 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
CACNA1D-209ENST00000636448 DDRGK1Q96HY6 314 aa10.62□□□□□ -0.71
CACNA1D-209ENST00000636448 RCAN3Q9UKA8 241 aa10.62□□□□□ -0.71
CACNA1D-209ENST00000636448 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
CACNA1D-209ENST00000636448 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
CACNA1D-209ENST00000636448 NAP1L5Q96NT1 182 aaPredicted RBP10.61□□□□□ -0.71
CACNA1D-209ENST00000636448 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
CACNA1D-209ENST00000636448 EXOC6Q8TAG9 804 aa10.6□□□□□ -0.71
CACNA1D-209ENST00000636448 CCDC146Q8IYE0 955 aa10.6□□□□□ -0.71
CACNA1D-209ENST00000636448 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
CACNA1D-209ENST00000636448 PRKRIP1Q9H875 184 aaPredicted RBP10.59□□□□□ -0.71
CACNA1D-209ENST00000636448 ARID3AQ99856 593 aa10.58□□□□□ -0.71
CACNA1D-209ENST00000636448 EIF4G1Q04637 1599 aaKnown RBP10.58□□□□□ -0.72
CACNA1D-209ENST00000636448 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
CACNA1D-209ENST00000636448 BECN1Q14457 450 aa10.58□□□□□ -0.72
CACNA1D-209ENST00000636448 IPO9Q96P70 1041 aaKnown RBP10.58□□□□□ -0.72
CACNA1D-209ENST00000636448 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
CACNA1D-209ENST00000636448 ARHGAP35Q9NRY4 1499 aa10.57□□□□□ -0.72
CACNA1D-209ENST00000636448 NUDCQ9Y266 331 aa10.57□□□□□ -0.72
CACNA1D-209ENST00000636448 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
CACNA1D-209ENST00000636448 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
CACNA1D-209ENST00000636448 ST20-MTHFSA0A0A6YYL1 179 aa10.56□□□□□ -0.72
CACNA1D-209ENST00000636448 TRIM44Q96DX7 344 aaPredicted RBP10.56□□□□□ -0.72
CACNA1D-209ENST00000636448 FHAD1B1AJZ9 1412 aa10.55□□□□□ -0.72
CACNA1D-209ENST00000636448 APBB1O00213 710 aa10.55□□□□□ -0.72
CACNA1D-209ENST00000636448 SOX12O15370 315 aa10.55□□□□□ -0.72
CACNA1D-209ENST00000636448 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms