RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 SHROOM2Q13796 1616 aa13.16□□□□□ -0.3
PCCA-212ENST00000636420 NUP160Q12769 1436 aa13.16□□□□□ -0.3
PCCA-212ENST00000636420 GRIN2AQ12879 1464 aa13.16□□□□□ -0.3
PCCA-212ENST00000636420 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
PCCA-212ENST00000636420 ABCC10Q5T3U5 1492 aa13.13□□□□□ -0.31
PCCA-212ENST00000636420 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
PCCA-212ENST00000636420 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
PCCA-212ENST00000636420 DIP2BQ9P265 1576 aa13.09□□□□□ -0.31
PCCA-212ENST00000636420 ADAMTS12P58397 1594 aa13.08□□□□□ -0.32
PCCA-212ENST00000636420 FAM69CQ0P6D2 419 aa13.08□□□□□ -0.32
PCCA-212ENST00000636420 MAPKBP1O60336 1514 aa13.07□□□□□ -0.32
PCCA-212ENST00000636420 KDM6BO15054 1643 aa13.06□□□□□ -0.32
PCCA-212ENST00000636420 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
PCCA-212ENST00000636420 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
PCCA-212ENST00000636420 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
PCCA-212ENST00000636420 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
PCCA-212ENST00000636420 HECW2Q9P2P5 1572 aa12.99□□□□□ -0.33
PCCA-212ENST00000636420 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
PCCA-212ENST00000636420 JPH4Q96JJ6 628 aa12.96□□□□□ -0.34
PCCA-212ENST00000636420 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
PCCA-212ENST00000636420 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
PCCA-212ENST00000636420 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
PCCA-212ENST00000636420 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCCA-212ENST00000636420 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
PCCA-212ENST00000636420 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
PCCA-212ENST00000636420 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
PCCA-212ENST00000636420 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
PCCA-212ENST00000636420 FBXO41Q8TF61 875 aa12.86□□□□□ -0.35
PCCA-212ENST00000636420 GLI2P10070 1586 aa12.83□□□□□ -0.36
PCCA-212ENST00000636420 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.36
PCCA-212ENST00000636420 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
PCCA-212ENST00000636420 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
PCCA-212ENST00000636420 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
PCCA-212ENST00000636420 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
PCCA-212ENST00000636420 PLB1Q6P1J6 1458 aa12.75□□□□□ -0.37
PCCA-212ENST00000636420 MYT1Q01538 1121 aa12.74□□□□□ -0.37
PCCA-212ENST00000636420 PTPRGP23470 1445 aa12.74□□□□□ -0.37
PCCA-212ENST00000636420 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
PCCA-212ENST00000636420 KCNA4P22459 653 aa12.73□□□□□ -0.37
PCCA-212ENST00000636420 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
PCCA-212ENST00000636420 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
PCCA-212ENST00000636420 CUL7Q14999 1698 aa12.68□□□□□ -0.38
PCCA-212ENST00000636420 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
PCCA-212ENST00000636420 LMTK3Q96Q04 1460 aa12.68□□□□□ -0.38
PCCA-212ENST00000636420 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
PCCA-212ENST00000636420 TEX14Q8IWB6 1497 aa12.67□□□□□ -0.38
PCCA-212ENST00000636420 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
PCCA-212ENST00000636420 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
PCCA-212ENST00000636420 IGF1RP08069 1367 aa12.64□□□□□ -0.39
PCCA-212ENST00000636420 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
PCCA-212ENST00000636420 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
PCCA-212ENST00000636420 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
PCCA-212ENST00000636420 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
PCCA-212ENST00000636420 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
PCCA-212ENST00000636420 KIF21BO75037 1637 aa12.6□□□□□ -0.39
PCCA-212ENST00000636420 DISP1Q96F81 1524 aa12.6□□□□□ -0.39
PCCA-212ENST00000636420 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
PCCA-212ENST00000636420 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
PCCA-212ENST00000636420 PTPRMP28827 1452 aa12.58□□□□□ -0.4
PCCA-212ENST00000636420 MAGI3Q5TCQ9 1506 aa12.57□□□□□ -0.4
PCCA-212ENST00000636420 SOCS7O14512 581 aa12.57□□□□□ -0.4
PCCA-212ENST00000636420 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
PCCA-212ENST00000636420 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
PCCA-212ENST00000636420 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
PCCA-212ENST00000636420 IQGAP2Q13576 1575 aa12.55□□□□□ -0.4
PCCA-212ENST00000636420 TRIM26Q12899 539 aaPredicted RBP12.54□□□□□ -0.4
PCCA-212ENST00000636420 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
PCCA-212ENST00000636420 CD109Q6YHK3 1445 aa12.52□□□□□ -0.41
PCCA-212ENST00000636420 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
PCCA-212ENST00000636420 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
PCCA-212ENST00000636420 CFAP43Q8NDM7 1665 aa12.5□□□□□ -0.41
PCCA-212ENST00000636420 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
PCCA-212ENST00000636420 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
PCCA-212ENST00000636420 ARAP3Q8WWN8 1544 aa12.49□□□□□ -0.41
PCCA-212ENST00000636420 UGGT2Q9NYU1 1516 aa12.49□□□□□ -0.41
PCCA-212ENST00000636420 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
PCCA-212ENST00000636420 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
PCCA-212ENST00000636420 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
PCCA-212ENST00000636420 KIAA0556O60303 1618 aa12.46□□□□□ -0.41
PCCA-212ENST00000636420 MADDQ8WXG6 1647 aa12.46□□□□□ -0.41
PCCA-212ENST00000636420 BCORL1Q5H9F3 1711 aa12.45□□□□□ -0.42
PCCA-212ENST00000636420 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
PCCA-212ENST00000636420 HSPA2P54652 639 aa12.43□□□□□ -0.42
PCCA-212ENST00000636420 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
PCCA-212ENST00000636420 ABCA8O94911 1581 aa12.41□□□□□ -0.42
PCCA-212ENST00000636420 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
PCCA-212ENST00000636420 FRMPD1Q5SYB0 1578 aa12.4□□□□□ -0.42
PCCA-212ENST00000636420 SPATA31D1Q6ZQQ2 1576 aa12.38□□□□□ -0.43
PCCA-212ENST00000636420 RIMS1Q86UR5 1692 aaKnown RBP12.37□□□□□ -0.43
PCCA-212ENST00000636420 RAPGEF3O95398 923 aa12.37□□□□□ -0.43
PCCA-212ENST00000636420 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
PCCA-212ENST00000636420 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
PCCA-212ENST00000636420 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.43
PCCA-212ENST00000636420 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
PCCA-212ENST00000636420 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
PCCA-212ENST00000636420 NEO1Q92859 1461 aa12.32□□□□□ -0.44
PCCA-212ENST00000636420 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
PCCA-212ENST00000636420 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
PCCA-212ENST00000636420 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
PCCA-212ENST00000636420 ATP10BO94823 1461 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms