RNA–Protein interactions for RNA: ENST00000635929.1

PLCB1-223, Transcript of phospholipase C beta 1, human

TSL 5

Gene PLCB1, Length 2,291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLCB1-223	ENST00000635929	CUX2	O14529	1486 aa		13.05	□□□□□ -0.32
PLCB1-223	ENST00000635929	KANK4	Q5T7N3	995 aa	Predicted RBP	13.05	□□□□□ -0.32
PLCB1-223	ENST00000635929	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.04	□□□□□ -0.32
PLCB1-223	ENST00000635929	B4GALNT3	Q6L9W6	998 aa		13.04	□□□□□ -0.32
PLCB1-223	ENST00000635929	NACAD	O15069	1562 aa		13.03	□□□□□ -0.32
PLCB1-223	ENST00000635929	RRBP1	Q9P2E9	1410 aa	Known RBP	13.03	□□□□□ -0.32
PLCB1-223	ENST00000635929	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.03	□□□□□ -0.32
PLCB1-223	ENST00000635929	KIF21B	O75037	1637 aa		13.03	□□□□□ -0.32
PLCB1-223	ENST00000635929	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.03	□□□□□ -0.32
PLCB1-223	ENST00000635929	SIN3A	Q96ST3	1273 aa		13.01	□□□□□ -0.33
PLCB1-223	ENST00000635929	CCNB3	Q8WWL7	1395 aa		13	□□□□□ -0.33
PLCB1-223	ENST00000635929	RAB3GAP2	Q9H2M9	1393 aa		13	□□□□□ -0.33
PLCB1-223	ENST00000635929	WDR97	A6NE52	1622 aa		12.99	□□□□□ -0.33
PLCB1-223	ENST00000635929	TOP2A	P11388	1531 aa	Known RBP	12.99	□□□□□ -0.33
PLCB1-223	ENST00000635929	USP35	Q9P2H5	1018 aa		12.96	□□□□□ -0.33
PLCB1-223	ENST00000635929	MAPKBP1	O60336	1514 aa		12.96	□□□□□ -0.34
PLCB1-223	ENST00000635929	RAPGEF2	Q9Y4G8	1499 aa		12.95	□□□□□ -0.34
PLCB1-223	ENST00000635929	WASHC2A	Q641Q2	1341 aa		12.95	□□□□□ -0.34
PLCB1-223	ENST00000635929	SMARCA2	P51531	1590 aa		12.94	□□□□□ -0.34
PLCB1-223	ENST00000635929	EIF5B	O60841	1220 aa	Known RBP	12.94	□□□□□ -0.34
PLCB1-223	ENST00000635929	C11orf95	C9JLR9	678 aa	Predicted RBP	12.93	□□□□□ -0.34
PLCB1-223	ENST00000635929	SETD5	Q9C0A6	1442 aa		12.92	□□□□□ -0.34
PLCB1-223	ENST00000635929	NEFM	P07197	916 aa		12.9	□□□□□ -0.35
PLCB1-223	ENST00000635929	WASHC2C	Q9Y4E1	1318 aa		12.88	□□□□□ -0.35
PLCB1-223	ENST00000635929	PPM1G	O15355	546 aa	Predicted RBP	12.85	□□□□□ -0.35
PLCB1-223	ENST00000635929	ZBED9	Q6R2W3	1325 aa		12.84	□□□□□ -0.35
PLCB1-223	ENST00000635929	ARAP1	Q96P48	1450 aa		12.83	□□□□□ -0.36
PLCB1-223	ENST00000635929	FAM9B	Q8IZU0	186 aa		12.83	□□□□□ -0.36
PLCB1-223	ENST00000635929	TONSL	Q96HA7	1378 aa		12.82	□□□□□ -0.36
PLCB1-223	ENST00000635929	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.81	□□□□□ -0.36
PLCB1-223	ENST00000635929	RSPH6A	Q9H0K4	717 aa		12.81	□□□□□ -0.36
PLCB1-223	ENST00000635929	LAS1L	Q9Y4W2	734 aa	Known RBP	12.81	□□□□□ -0.36
PLCB1-223	ENST00000635929	GSE1	Q14687	1217 aa		12.8	□□□□□ -0.36
PLCB1-223	ENST00000635929	NPM2	Q86SE8	214 aa	Known RBP	12.79	□□□□□ -0.36
PLCB1-223	ENST00000635929	PKNOX2	Q96KN3	472 aa		12.79	□□□□□ -0.36
PLCB1-223	ENST00000635929	BRPF3	Q9ULD4	1205 aa		12.79	□□□□□ -0.36
PLCB1-223	ENST00000635929	FAM50A	Q14320	339 aa	Known RBP	12.78	□□□□□ -0.36
PLCB1-223	ENST00000635929	SYNJ1	O43426	1573 aa		12.77	□□□□□ -0.36
PLCB1-223	ENST00000635929	CCDC184	Q52MB2	194 aa		12.77	□□□□□ -0.37
PLCB1-223	ENST00000635929	MRS2	Q9HD23	443 aa		12.77	□□□□□ -0.37
PLCB1-223	ENST00000635929	GLIPR1L2	Q4G1C9	344 aa		12.76	□□□□□ -0.37
PLCB1-223	ENST00000635929	SMARCA4	P51532	1647 aa		12.74	□□□□□ -0.37
PLCB1-223	ENST00000635929	TCERG1	O14776	1098 aa	Known RBP	12.73	□□□□□ -0.37
PLCB1-223	ENST00000635929	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.73	□□□□□ -0.37
PLCB1-223	ENST00000635929	ERICH3	Q5RHP9	1530 aa		12.72	□□□□□ -0.37
PLCB1-223	ENST00000635929	FHAD1	B1AJZ9	1412 aa		12.71	□□□□□ -0.38
PLCB1-223	ENST00000635929	RNF123	Q5XPI4	1314 aa		12.71	□□□□□ -0.38
PLCB1-223	ENST00000635929	PDE4A	P27815	886 aa		12.71	□□□□□ -0.38
PLCB1-223	ENST00000635929	PRX	Q9BXM0	1461 aa		12.7	□□□□□ -0.38
PLCB1-223	ENST00000635929	NUDC	Q9Y266	331 aa		12.7	□□□□□ -0.38
PLCB1-223	ENST00000635929	SMG6	Q86US8	1419 aa	Known RBP	12.7	□□□□□ -0.38
PLCB1-223	ENST00000635929	HSPA5	P11021	654 aa	Known RBP	12.69	□□□□□ -0.38
PLCB1-223	ENST00000635929	FAM43A	Q8N2R8	423 aa		12.69	□□□□□ -0.38
PLCB1-223	ENST00000635929	DDRGK1	Q96HY6	314 aa		12.69	□□□□□ -0.38
PLCB1-223	ENST00000635929	NCAPD3	P42695	1498 aa		12.69	□□□□□ -0.38
PLCB1-223	ENST00000635929	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
PLCB1-223	ENST00000635929	FRAT1	Q92837	279 aa	Predicted RBP	12.67	□□□□□ -0.38
PLCB1-223	ENST00000635929	BACH2	Q9BYV9	841 aa		12.67	□□□□□ -0.38
PLCB1-223	ENST00000635929	AKNA	Q7Z591	1439 aa		12.67	□□□□□ -0.38
PLCB1-223	ENST00000635929	MS4A1	P11836	297 aa		12.66	□□□□□ -0.38
PLCB1-223	ENST00000635929	NFKBIB	Q15653	356 aa		12.66	□□□□□ -0.38
PLCB1-223	ENST00000635929	DAXX	Q9UER7	740 aa	Predicted RBP	12.65	□□□□□ -0.38
PLCB1-223	ENST00000635929	CNTLN	Q9NXG0	1405 aa		12.65	□□□□□ -0.38
PLCB1-223	ENST00000635929	PHLDB1	Q86UU1	1377 aa		12.64	□□□□□ -0.39
PLCB1-223	ENST00000635929	MAP3K1	Q13233	1512 aa		12.63	□□□□□ -0.39
PLCB1-223	ENST00000635929	ARHGAP35	Q9NRY4	1499 aa		12.63	□□□□□ -0.39
PLCB1-223	ENST00000635929	LRRC9	Q6ZRR7	1453 aa		12.61	□□□□□ -0.39
PLCB1-223	ENST00000635929	ZMYND15	Q9H091	742 aa		12.59	□□□□□ -0.39
PLCB1-223	ENST00000635929	VSIG10	Q8N0Z9	540 aa		12.59	□□□□□ -0.39
PLCB1-223	ENST00000635929	NCOA2	Q15596	1464 aa		12.59	□□□□□ -0.39
PLCB1-223	ENST00000635929	TIAM1	Q13009	1591 aa		12.58	□□□□□ -0.4
PLCB1-223	ENST00000635929	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.57	□□□□□ -0.4
PLCB1-223	ENST00000635929	PEG3	Q9GZU2	1588 aa		12.57	□□□□□ -0.4
PLCB1-223	ENST00000635929	UACA	Q9BZF9	1416 aa		12.57	□□□□□ -0.4
PLCB1-223	ENST00000635929	CCDC7	Q96M83	1385 aa		12.56	□□□□□ -0.4
PLCB1-223	ENST00000635929	TOP2B	Q02880	1626 aa		12.55	□□□□□ -0.4
PLCB1-223	ENST00000635929	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.55	□□□□□ -0.4
PLCB1-223	ENST00000635929	EXOC6	Q8TAG9	804 aa		12.54	□□□□□ -0.4
PLCB1-223	ENST00000635929	DCAF11	Q8TEB1	546 aa		12.54	□□□□□ -0.4
PLCB1-223	ENST00000635929	KIF27	Q86VH2	1401 aa		12.54	□□□□□ -0.4
PLCB1-223	ENST00000635929	RRP1	P56182	461 aa	Known RBP	12.53	□□□□□ -0.4
PLCB1-223	ENST00000635929	NCOA1	Q15788	1441 aa		12.52	□□□□□ -0.41
PLCB1-223	ENST00000635929	SLC4A3	P48751	1232 aa		12.52	□□□□□ -0.41
PLCB1-223	ENST00000635929	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.51	□□□□□ -0.41
PLCB1-223	ENST00000635929	CCDC18	Q5T9S5	1454 aa		12.51	□□□□□ -0.41
PLCB1-223	ENST00000635929	FRAT2	O75474	233 aa	Predicted RBP	12.5	□□□□□ -0.41
PLCB1-223	ENST00000635929	RRP9	O43818	475 aa	Known RBP	12.49	□□□□□ -0.41
PLCB1-223	ENST00000635929	TMC1	Q8TDI8	760 aa		12.48	□□□□□ -0.41
PLCB1-223	ENST00000635929	RCAN3	Q9UKA8	241 aa		12.48	□□□□□ -0.41
PLCB1-223	ENST00000635929	KDM5B	Q9UGL1	1544 aa		12.48	□□□□□ -0.41
PLCB1-223	ENST00000635929	HSP90AA1	P07900	732 aa	Known RBP	12.48	□□□□□ -0.41
PLCB1-223	ENST00000635929	PNISR	Q8TF01	805 aa	Known RBP	12.48	□□□□□ -0.41
PLCB1-223	ENST00000635929	HFM1	A2PYH4	1435 aa		12.47	□□□□□ -0.41
PLCB1-223	ENST00000635929	CNGB1	Q14028	1251 aa	Predicted RBP	12.47	□□□□□ -0.41
PLCB1-223	ENST00000635929	KIF7	Q2M1P5	1343 aa		12.47	□□□□□ -0.41
PLCB1-223	ENST00000635929	L1TD1	Q5T7N2	865 aa	Known RBP	12.46	□□□□□ -0.42
PLCB1-223	ENST00000635929	L3MBTL2	Q969R5	705 aa		12.46	□□□□□ -0.42
PLCB1-223	ENST00000635929	SENP3-EIF4A1	A0A087X0R7	540 aa		12.45	□□□□□ -0.42
PLCB1-223	ENST00000635929	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.45	□□□□□ -0.42
PLCB1-223	ENST00000635929	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms