RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
C11orf53-202ENST00000635886 KIAA0586Q9BVV6 1533 aa22.76■■□□□ 1.23
C11orf53-202ENST00000635886 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
C11orf53-202ENST00000635886 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
C11orf53-202ENST00000635886 PRXQ9BXM0 1461 aa22.61■■□□□ 1.21
C11orf53-202ENST00000635886 IQGAP2Q13576 1575 aa22.61■■□□□ 1.21
C11orf53-202ENST00000635886 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
C11orf53-202ENST00000635886 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
C11orf53-202ENST00000635886 EEA1Q15075 1411 aa22.54■■□□□ 1.2
C11orf53-202ENST00000635886 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
C11orf53-202ENST00000635886 CARMIL2Q6F5E8 1435 aa22.51■■□□□ 1.19
C11orf53-202ENST00000635886 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
C11orf53-202ENST00000635886 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
C11orf53-202ENST00000635886 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
C11orf53-202ENST00000635886 CTTNBP2Q8WZ74 1663 aa22.48■■□□□ 1.19
C11orf53-202ENST00000635886 PTPRGP23470 1445 aa22.47■■□□□ 1.19
C11orf53-202ENST00000635886 TNIKQ9UKE5 1360 aa22.46■■□□□ 1.19
C11orf53-202ENST00000635886 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.18
C11orf53-202ENST00000635886 ADCY10Q96PN6 1610 aa22.42■■□□□ 1.18
C11orf53-202ENST00000635886 KIAA0556O60303 1618 aa22.4■■□□□ 1.18
C11orf53-202ENST00000635886 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
C11orf53-202ENST00000635886 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
C11orf53-202ENST00000635886 KIF21BO75037 1637 aa22.32■■□□□ 1.16
C11orf53-202ENST00000635886 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
C11orf53-202ENST00000635886 MAPKBP1O60336 1514 aa22.29■■□□□ 1.16
C11orf53-202ENST00000635886 UHRF1BP1LA0JNW5 1464 aa22.28■■□□□ 1.16
C11orf53-202ENST00000635886 ABCC2Q92887 1545 aa22.27■■□□□ 1.16
C11orf53-202ENST00000635886 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
C11orf53-202ENST00000635886 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
C11orf53-202ENST00000635886 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
C11orf53-202ENST00000635886 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
C11orf53-202ENST00000635886 KIF13AQ9H1H9 1805 aa22.21■■□□□ 1.15
C11orf53-202ENST00000635886 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
C11orf53-202ENST00000635886 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
C11orf53-202ENST00000635886 FAM69CQ0P6D2 419 aa22.19■■□□□ 1.14
C11orf53-202ENST00000635886 KDM5BQ9UGL1 1544 aa22.18■■□□□ 1.14
C11orf53-202ENST00000635886 ABCA8O94911 1581 aa22.17■■□□□ 1.14
C11orf53-202ENST00000635886 DIP2BQ9P265 1576 aa22.17■■□□□ 1.14
C11orf53-202ENST00000635886 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
C11orf53-202ENST00000635886 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
C11orf53-202ENST00000635886 ZCCHC11Q5TAX3 1644 aaKnown RBP22.13■■□□□ 1.13
C11orf53-202ENST00000635886 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
C11orf53-202ENST00000635886 EFCAB5A4FU69 1503 aa22.08■■□□□ 1.13
C11orf53-202ENST00000635886 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
C11orf53-202ENST00000635886 ARID3CA6NKF2 412 aa22.02■■□□□ 1.12
C11orf53-202ENST00000635886 GLI2P10070 1586 aa22.02■■□□□ 1.12
C11orf53-202ENST00000635886 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
C11orf53-202ENST00000635886 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.11
C11orf53-202ENST00000635886 ATP10BO94823 1461 aa22■■□□□ 1.11
C11orf53-202ENST00000635886 TSPOAP1O95153 1857 aa21.98■■□□□ 1.11
C11orf53-202ENST00000635886 ARHGAP35Q9NRY4 1499 aa21.97■■□□□ 1.11
C11orf53-202ENST00000635886 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
C11orf53-202ENST00000635886 KCNH8Q96L42 1107 aa21.93■■□□□ 1.1
C11orf53-202ENST00000635886 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
C11orf53-202ENST00000635886 PPRC1Q5VV67 1664 aaKnown RBP21.91■■□□□ 1.1
C11orf53-202ENST00000635886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
C11orf53-202ENST00000635886 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
C11orf53-202ENST00000635886 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
C11orf53-202ENST00000635886 KDM6BO15054 1643 aa21.84■■□□□ 1.09
C11orf53-202ENST00000635886 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
C11orf53-202ENST00000635886 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
C11orf53-202ENST00000635886 TEX14Q8IWB6 1497 aa21.82■■□□□ 1.08
C11orf53-202ENST00000635886 CLIP1P30622 1438 aa21.8■■□□□ 1.08
C11orf53-202ENST00000635886 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
C11orf53-202ENST00000635886 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
C11orf53-202ENST00000635886 PLEKHD1A6NEE1 506 aa21.79■■□□□ 1.08
C11orf53-202ENST00000635886 HECW1Q76N89 1606 aa21.79■■□□□ 1.08
C11orf53-202ENST00000635886 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
C11orf53-202ENST00000635886 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
C11orf53-202ENST00000635886 COL17A1Q9UMD9 1497 aaPredicted RBP21.75■■□□□ 1.07
C11orf53-202ENST00000635886 CASKIN1Q8WXD9 1431 aa21.71■■□□□ 1.07
C11orf53-202ENST00000635886 PCF11O94913 1555 aaKnown RBP21.7■■□□□ 1.06
C11orf53-202ENST00000635886 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
C11orf53-202ENST00000635886 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
C11orf53-202ENST00000635886 CEP162Q5TB80 1403 aa21.67■■□□□ 1.06
C11orf53-202ENST00000635886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
C11orf53-202ENST00000635886 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
C11orf53-202ENST00000635886 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
C11orf53-202ENST00000635886 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
C11orf53-202ENST00000635886 CCDC18Q5T9S5 1454 aa21.62■■□□□ 1.05
C11orf53-202ENST00000635886 TROQ12816 1431 aaPredicted RBP21.61■■□□□ 1.05
C11orf53-202ENST00000635886 NEO1Q92859 1461 aa21.6■■□□□ 1.05
C11orf53-202ENST00000635886 PHLDB1Q86UU1 1377 aa21.6■■□□□ 1.05
C11orf53-202ENST00000635886 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
C11orf53-202ENST00000635886 KIF14Q15058 1648 aa21.57■■□□□ 1.04
C11orf53-202ENST00000635886 FANCAO15360 1455 aa21.54■■□□□ 1.04
C11orf53-202ENST00000635886 PLCH2O75038 1416 aa21.53■■□□□ 1.04
C11orf53-202ENST00000635886 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
C11orf53-202ENST00000635886 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
C11orf53-202ENST00000635886 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
C11orf53-202ENST00000635886 MYO5CQ9NQX4 1742 aa21.48■■□□□ 1.03
C11orf53-202ENST00000635886 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
C11orf53-202ENST00000635886 FRMPD1Q5SYB0 1578 aa21.46■■□□□ 1.03
C11orf53-202ENST00000635886 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
C11orf53-202ENST00000635886 KDM4FA0A1W2PPD8 638 aa21.44■■□□□ 1.02
C11orf53-202ENST00000635886 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
C11orf53-202ENST00000635886 ADGRL1O94910 1474 aa21.43■■□□□ 1.02
C11orf53-202ENST00000635886 ARHGAP5Q13017 1502 aa21.42■■□□□ 1.02
C11orf53-202ENST00000635886 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
C11orf53-202ENST00000635886 RICTORQ6R327 1708 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms